downloading reverse dependencies ... downloading defineR_0.0.4.tar.gz ... ok downloading epubr_0.6.5.tar.gz ... ok downloading equatags_0.2.1.tar.gz ... ok downloading eudract_1.0.2.tar.gz ... ok downloading SticsRFiles_1.5.0.tar.gz ... ok downloading tinkr_0.2.0.tar.gz ... ok downloading RNeXML_2.4.11.tar.gz ... ok installing dependencies ‘common’, ‘katex’, ‘knitcitations’, ‘libr’, ‘rdflib’, ‘reporter’, ‘rfigshare’, ‘taxalight’, ‘xslt’ also installing the dependencies ‘storr’, ‘fmtr’, ‘thor’, ‘contentid’ begin installing package ‘storr’ begin installing package ‘contentid’ begin installing package ‘xslt’ begin installing package ‘common’ begin installing package ‘katex’ begin installing package ‘rdflib’ begin installing package ‘rfigshare’ begin installing package ‘knitcitations’ * installing *source* package ‘common’ ... ** package ‘common’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (common) * installing *source* package ‘katex’ ... ** package ‘katex’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (katex) begin installing package ‘fmtr’ begin installing package ‘libr’ * installing *source* package ‘contentid’ ... ** package ‘contentid’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (contentid) * installing *source* package ‘knitcitations’ ... ** package ‘knitcitations’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (knitcitations) * installing *source* package ‘rdflib’ ... ** package ‘rdflib’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rdflib) * installing *source* package ‘rfigshare’ ... ** package ‘rfigshare’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rfigshare) * installing *source* package ‘storr’ ... ** package ‘storr’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-8) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpnMGnK7/R.INSTALL2cf8e6273ab117/storr/src' gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c storr.c -o storr.o gcc-14 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o storr.so storr.o -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpnMGnK7/R.INSTALL2cf8e6273ab117/storr/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-storr/00new/storr/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (storr) begin installing package ‘thor’ * installing *source* package ‘xslt’ ... ** using staged installation Found pkg-config cflags and libs! Using PKG_CFLAGS=-I/usr/include/libxml2 Using PKG_LIBS=-lexslt -lxslt -lxml2 ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-8) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp654WZW/R.INSTALL2cf8e92bda88a4/xslt/src' rm -f RcppExports.o xslt.o xslt_init.o xslt.so g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/include/libxml2 -DSTRICT_R_HEADERS -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/xml2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o In file included from xslt_types.h:1, from RcppExports.cpp:4: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/xml2/include/xml2_types.h:5:9: warning: "R_NO_REMAP" redefined 5 | #define R_NO_REMAP | ^~~~~~~~~~ : note: this is the location of the previous definition g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/include/libxml2 -DSTRICT_R_HEADERS -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/xml2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c xslt.cpp -o xslt.o In file included from xslt_types.h:1, from xslt.cpp:7: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/xml2/include/xml2_types.h:5:9: warning: "R_NO_REMAP" redefined 5 | #define R_NO_REMAP | ^~~~~~~~~~ : note: this is the location of the previous definition g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/include/libxml2 -DSTRICT_R_HEADERS -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/xml2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c xslt_init.cpp -o xslt_init.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o xslt.so RcppExports.o xslt.o xslt_init.o -lexslt -lxslt -lxml2 -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp654WZW/R.INSTALL2cf8e92bda88a4/xslt/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-xslt/00new/xslt/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (xslt) * installing *source* package ‘fmtr’ ... ** package ‘fmtr’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-8) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmptWk94m/R.INSTALL2cfafe6cae6073/fmtr/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c code.cpp -o code.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o fmtr.so RcppExports.o code.o -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmptWk94m/R.INSTALL2cfafe6cae6073/fmtr/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-fmtr/00new/fmtr/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (fmtr) begin installing package ‘reporter’ * installing *source* package ‘thor’ ... ** package ‘thor’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-8) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp3mCyky/R.INSTALL2cfbaa4b294ac2/thor/src' gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ilmdb -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c lmdb/mdb.c -o lmdb/mdb.o lmdb/mdb.c: In function ‘mdb_page_dirty’: lmdb/mdb.c:2383:13: warning: variable ‘rc’ set but not used [-Wunused-but-set-variable] 2383 | int rc, (*insert)(MDB_ID2L, MDB_ID2 *); | ^~ gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ilmdb -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c lmdb/midl.c -o lmdb/midl.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ilmdb -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c registration.c -o registration.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ilmdb -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c thor.c -o thor.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ilmdb -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c util.c -o util.o gcc-14 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o thor.so lmdb/mdb.o lmdb/midl.o registration.o thor.o util.o -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp3mCyky/R.INSTALL2cfbaa4b294ac2/thor/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-thor/00new/thor/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (thor) begin installing package ‘taxalight’ * installing *source* package ‘taxalight’ ... ** package ‘taxalight’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (taxalight) * installing *source* package ‘libr’ ... ** package ‘libr’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-8) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpkTdMFl/R.INSTALL2cfafa1bb93d8a/libr/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c dshelpers.cpp -o dshelpers.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o libr.so RcppExports.o dshelpers.o -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpkTdMFl/R.INSTALL2cfafa1bb93d8a/libr/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-libr/00new/libr/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (libr) * installing *source* package ‘reporter’ ... ** package ‘reporter’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (reporter) checking xslt_1.5.0.tar.gz ... checking defineR_0.0.4.tar.gz ... checking epubr_0.6.5.tar.gz ... checking equatags_0.2.1.tar.gz ... checking eudract_1.0.2.tar.gz ... checking SticsRFiles_1.5.0.tar.gz ... checking tinkr_0.2.0.tar.gz ... checking RNeXML_2.4.11.tar.gz ... Depends: Package: xslt Depends: xml2 (>= 1.3.0) Imports: Rcpp LinkingTo: Rcpp, xml2 Timings: user system elapsed xslt 26.513 3.811 31.652 Results: Check status summary: NOTE OK Source packages 0 1 Reverse depends 2 5 Check results summary: xslt ... OK rdepends_defineR ... OK rdepends_epubr ... OK rdepends_equatags ... OK rdepends_eudract ... OK rdepends_RNeXML ... NOTE * checking Rd files ... [0s/0s] NOTE rdepends_SticsRFiles ... OK rdepends_tinkr ... NOTE * checking Rd files ... [0s/0s] NOTE