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Type 'q()' to quit R. > library(testthat) > library(xegaSelectGene) > > test_check("xegaSelectGene") EvalGeneU: EvalGeneU: EvalGeneU: EvalGeneU: Uniform Uniform Selecting n= 10 candidates TransformSelect: 5.483627e-05 Uniform Selecting n= 100 candidates TransformSelect: 7.70092e-05 Uniform Selecting n= 10 candidates Uniform Selecting n= 100 candidates Proportional Proportional Selecting n= 10 candidates TransformSelect: 9.703636e-05 Proportional Selecting n= 100 candidates TransformSelect: 0.0005300045 Proportional Selecting n= 10 candidates Proportional Selecting n= 100 candidates ProportionalOnln ProportionalOnln Selecting n= 10 candidates TransformSelect: 0.0002059937 ProportionalOnln Selecting n= 100 candidates TransformSelect: 0.0002918243 ProportionalOnln Selecting n= 10 candidates ProportionalOnln Selecting n= 100 candidates ProportionalM ProportionalM Selecting n= 10 candidates TransformSelect: 8.606911e-05 ProportionalM Selecting n= 100 candidates TransformSelect: 0.0002279282 ProportionalM Selecting n= 10 candidates ProportionalM Selecting n= 100 candidates PropFitDiffOnln PropFitDiffOnln Selecting n= 10 candidates TransformSelect: 0.0002679825 PropFitDiffOnln Selecting n= 100 candidates TransformSelect: 0.0002980232 PropFitDiffOnln Selecting n= 10 candidates PropFitDiffOnln Selecting n= 100 candidates PropFitDiff PropFitDiff Selecting n= 10 candidates TransformSelect: 0.0001139641 PropFitDiff Selecting n= 100 candidates TransformSelect: 0.0006451607 PropFitDiff Selecting n= 10 candidates PropFitDiff Selecting n= 100 candidates PropFitDiffM PropFitDiffM Selecting n= 10 candidates TransformSelect: 0.0001671314 PropFitDiffM Selecting n= 100 candidates TransformSelect: 0.0003027916 PropFitDiffM Selecting n= 10 candidates PropFitDiffM Selecting n= 100 candidates SUS SUS Selecting n= 10 candidates TransformSelect: 0.0001358986 SUS Selecting n= 100 candidates TransformSelect: 0.0001840591 SUS Selecting n= 10 candidates SUS Selecting n= 100 candidates LRTSR LRTSR Selecting n= 10 candidates TransformSelect: 0.0005269051 LRTSR Selecting n= 100 candidates TransformSelect: 0.0004980564 LRTSR Selecting n= 10 candidates LRTSR Selecting n= 100 candidates LRSelective LRSelective Selecting n= 10 candidates TransformSelect: 0.000276804 LRSelective Selecting n= 100 candidates TransformSelect: 0.0003039837 LRSelective Selecting n= 10 candidates LRSelective Selecting n= 100 candidates Duel Duel Selecting n= 10 candidates TransformSelect: 9.989738e-05 Duel Selecting n= 100 candidates TransformSelect: 0.000125885 Duel Selecting n= 10 candidates Duel Selecting n= 100 candidates Tournament Tournament Selecting n= 10 candidates TransformSelect: 0.0002479553 Tournament Selecting n= 100 candidates TransformSelect: 0.001590967 Tournament Selecting n= 10 candidates Tournament Selecting n= 100 candidates STournament STournament Selecting n= 10 candidates TransformSelect: 0.0003180504 STournament Selecting n= 100 candidates TransformSelect: 0.002850771 STournament Selecting n= 10 candidates STournament Selecting n= 100 candidates Uniform Uniform Selecting n= 100 candidates TransformSelect: 6.890297e-05 Uniform Selecting n= 280 candidates TransformSelect: 8.893013e-05 Uniform Selecting n= 460 candidates TransformSelect: 0.000109911 Uniform Selecting n= 640 candidates TransformSelect: 0.0001399517 Uniform Selecting n= 820 candidates TransformSelect: 0.0001418591 Uniform Selecting n= 1000 candidates TransformSelect: 0.0001070499 Uniform Selecting n= 100 candidates Uniform Selecting n= 280 candidates Uniform Selecting n= 460 candidates Uniform Selecting n= 640 candidates Uniform Selecting n= 820 candidates Uniform Selecting n= 1000 candidates Proportional Proportional Selecting n= 100 candidates TransformSelect: 0.0004770756 Proportional Selecting n= 280 candidates TransformSelect: 0.002080917 Proportional Selecting n= 460 candidates TransformSelect: 0.003853083 Proportional Selecting n= 640 candidates TransformSelect: 0.004849911 Proportional Selecting n= 820 candidates TransformSelect: 0.008599997 Proportional Selecting n= 1000 candidates TransformSelect: 0.006900072 Proportional Selecting n= 100 candidates Proportional Selecting n= 280 candidates Proportional Selecting n= 460 candidates Proportional Selecting n= 640 candidates Proportional Selecting n= 820 candidates Proportional Selecting n= 1000 candidates ProportionalOnln ProportionalOnln Selecting n= 100 candidates TransformSelect: 0.0003039837 ProportionalOnln Selecting n= 280 candidates TransformSelect: 0.000423193 ProportionalOnln Selecting n= 460 candidates TransformSelect: 0.0005459785 ProportionalOnln Selecting n= 640 candidates TransformSelect: 0.0007209778 ProportionalOnln Selecting n= 820 candidates TransformSelect: 0.0005249977 ProportionalOnln Selecting n= 1000 candidates TransformSelect: 0.0008628368 ProportionalOnln Selecting n= 100 candidates ProportionalOnln Selecting n= 280 candidates ProportionalOnln Selecting n= 460 candidates ProportionalOnln Selecting n= 640 candidates ProportionalOnln Selecting n= 820 candidates ProportionalOnln Selecting n= 1000 candidates ProportionalM ProportionalM Selecting n= 100 candidates TransformSelect: 0.0002558231 ProportionalM Selecting n= 280 candidates TransformSelect: 0.002153873 ProportionalM Selecting n= 460 candidates TransformSelect: 0.005748987 ProportionalM Selecting n= 640 candidates TransformSelect: 0.01101089 ProportionalM Selecting n= 820 candidates TransformSelect: 0.01272702 ProportionalM Selecting n= 1000 candidates TransformSelect: 0.02186012 ProportionalM Selecting n= 100 candidates ProportionalM Selecting n= 280 candidates ProportionalM Selecting n= 460 candidates ProportionalM Selecting n= 640 candidates ProportionalM Selecting n= 820 candidates ProportionalM Selecting n= 1000 candidates PropFitDiffOnln PropFitDiffOnln Selecting n= 100 candidates TransformSelect: 0.0003130436 PropFitDiffOnln Selecting n= 280 candidates TransformSelect: 0.0004971027 PropFitDiffOnln Selecting n= 460 candidates TransformSelect: 0.000603199 PropFitDiffOnln Selecting n= 640 candidates TransformSelect: 0.0007991791 PropFitDiffOnln Selecting n= 820 candidates TransformSelect: 0.001002789 PropFitDiffOnln Selecting n= 1000 candidates TransformSelect: 0.0006921291 PropFitDiffOnln Selecting n= 100 candidates PropFitDiffOnln Selecting n= 280 candidates PropFitDiffOnln Selecting n= 460 candidates PropFitDiffOnln Selecting n= 640 candidates PropFitDiffOnln Selecting n= 820 candidates PropFitDiffOnln Selecting n= 1000 candidates PropFitDiff PropFitDiff Selecting n= 100 candidates TransformSelect: 0.000590086 PropFitDiff Selecting n= 280 candidates TransformSelect: 0.001950979 PropFitDiff Selecting n= 460 candidates TransformSelect: 0.00504303 PropFitDiff Selecting n= 640 candidates TransformSelect: 0.007271051 PropFitDiff Selecting n= 820 candidates TransformSelect: 0.01183391 PropFitDiff Selecting n= 1000 candidates TransformSelect: 0.01164603 PropFitDiff Selecting n= 100 candidates PropFitDiff Selecting n= 280 candidates PropFitDiff Selecting n= 460 candidates PropFitDiff Selecting n= 640 candidates PropFitDiff Selecting n= 820 candidates PropFitDiff Selecting n= 1000 candidates PropFitDiffM PropFitDiffM Selecting n= 100 candidates TransformSelect: 0.0002579689 PropFitDiffM Selecting n= 280 candidates TransformSelect: 0.001926899 PropFitDiffM Selecting n= 460 candidates TransformSelect: 0.005547047 PropFitDiffM Selecting n= 640 candidates TransformSelect: 0.008718967 PropFitDiffM Selecting n= 820 candidates TransformSelect: 0.01708102 PropFitDiffM Selecting n= 1000 candidates TransformSelect: 0.02571297 PropFitDiffM Selecting n= 100 candidates PropFitDiffM Selecting n= 280 candidates PropFitDiffM Selecting n= 460 candidates PropFitDiffM Selecting n= 640 candidates PropFitDiffM Selecting n= 820 candidates PropFitDiffM Selecting n= 1000 candidates SUS SUS Selecting n= 100 candidates TransformSelect: 0.0001540184 SUS Selecting n= 280 candidates TransformSelect: 0.0002248287 SUS Selecting n= 460 candidates TransformSelect: 0.0002961159 SUS Selecting n= 640 candidates TransformSelect: 0.0003390312 SUS Selecting n= 820 candidates TransformSelect: 0.000524044 SUS Selecting n= 1000 candidates TransformSelect: 0.0006718636 SUS Selecting n= 100 candidates SUS Selecting n= 280 candidates SUS Selecting n= 460 candidates SUS Selecting n= 640 candidates SUS Selecting n= 820 candidates SUS Selecting n= 1000 candidates LRTSR LRTSR Selecting n= 100 candidates TransformSelect: 0.0005021095 LRTSR Selecting n= 280 candidates TransformSelect: 0.0005369186 LRTSR Selecting n= 460 candidates TransformSelect: 0.0005278587 LRTSR Selecting n= 640 candidates TransformSelect: 0.0006480217 LRTSR Selecting n= 820 candidates TransformSelect: 0.000797987 LRTSR Selecting n= 1000 candidates TransformSelect: 0.0009820461 LRTSR Selecting n= 100 candidates LRTSR Selecting n= 280 candidates LRTSR Selecting n= 460 candidates LRTSR Selecting n= 640 candidates LRTSR Selecting n= 820 candidates LRTSR Selecting n= 1000 candidates LRSelective LRSelective Selecting n= 100 candidates TransformSelect: 0.0002350807 LRSelective Selecting n= 280 candidates TransformSelect: 0.0002961159 LRSelective Selecting n= 460 candidates TransformSelect: 0.000316143 LRSelective Selecting n= 640 candidates TransformSelect: 0.0003399849 LRSelective Selecting n= 820 candidates TransformSelect: 0.0003011227 LRSelective Selecting n= 1000 candidates TransformSelect: 0.0003399849 LRSelective Selecting n= 100 candidates LRSelective Selecting n= 280 candidates LRSelective Selecting n= 460 candidates LRSelective Selecting n= 640 candidates LRSelective Selecting n= 820 candidates LRSelective Selecting n= 1000 candidates Duel Duel Selecting n= 100 candidates TransformSelect: 0.0001170635 Duel Selecting n= 280 candidates TransformSelect: 0.0001530647 Duel Selecting n= 460 candidates TransformSelect: 0.0001761913 Duel Selecting n= 640 candidates TransformSelect: 0.0002360344 Duel Selecting n= 820 candidates TransformSelect: 0.0002951622 Duel Selecting n= 1000 candidates TransformSelect: 0.0003190041 Duel Selecting n= 100 candidates Duel Selecting n= 280 candidates Duel Selecting n= 460 candidates Duel Selecting n= 640 candidates Duel Selecting n= 820 candidates Duel Selecting n= 1000 candidates Tournament Tournament Selecting n= 100 candidates TransformSelect: 0.001377821 Tournament Selecting n= 280 candidates TransformSelect: 0.003949165 Tournament Selecting n= 460 candidates TransformSelect: 0.006897926 Tournament Selecting n= 640 candidates TransformSelect: 0.009644985 Tournament Selecting n= 820 candidates TransformSelect: 0.01208496 Tournament Selecting n= 1000 candidates TransformSelect: 0.0141809 Tournament Selecting n= 100 candidates Tournament Selecting n= 280 candidates Tournament Selecting n= 460 candidates Tournament Selecting n= 640 candidates Tournament Selecting n= 820 candidates Tournament Selecting n= 1000 candidates STournament STournament Selecting n= 100 candidates TransformSelect: 0.002435923 STournament Selecting n= 280 candidates TransformSelect: 0.005842924 STournament Selecting n= 460 candidates TransformSelect: 0.009569168 STournament Selecting n= 640 candidates TransformSelect: 0.01673102 STournament Selecting n= 820 candidates TransformSelect: 0.01305318 STournament Selecting n= 1000 candidates TransformSelect: 0.016083 STournament Selecting n= 100 candidates STournament Selecting n= 280 candidates STournament Selecting n= 460 candidates STournament Selecting n= 640 candidates STournament Selecting n= 820 candidates STournament Selecting n= 1000 candidates [ FAIL 0 | WARN 0 | SKIP 0 | PASS 219 ] > > > proc.time() user system elapsed 20.98 1.54 29.87