* using log directory ‘/srv/hornik/tmp/CRAN/vivid.Rcheck’ * using R Under development (unstable) (2024-07-23 r86915) * using platform: x86_64-pc-linux-gnu * R was compiled by Debian clang version 18.1.8 (1+b1) Debian flang-new version 18.1.8 (1+b1) * running under: Debian GNU/Linux trixie/sid * using session charset: UTF-8 * checking for file ‘vivid/DESCRIPTION’ ... OK * this is package ‘vivid’ version ‘0.2.9’ * package encoding: UTF-8 * checking CRAN incoming feasibility ... [5s/5s] NOTE Maintainer: ‘Alan Inglis ’ Found the following (possibly) invalid URLs: URL: https://CRAN.R-project From: inst/doc/vividVignette.html Status: Error Message: Could not resolve host: CRAN.R-project URL: https://doi From: inst/doc/vividVignette.html Status: Error Message: Could not resolve host: doi URL: https://doi.org/10.1023/A From: inst/doc/vividVignette.html Status: 404 Message: Not Found URL: https://doi.org/10.1080/10618600.2014 From: inst/doc/vividVignette.html Status: 404 Message: Not Found Size of tarball: 17070825 bytes * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking serialization versions ... OK * checking whether package ‘vivid’ can be installed ... [4s/4s] OK * checking package directory ... OK * checking for future file timestamps ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... NOTE Non-standard file/directory found at top level: ‘docs’ * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [1s/1s] OK * checking whether the package can be loaded with stated dependencies ... [1s/1s] OK * checking whether the package can be unloaded cleanly ... [1s/1s] OK * checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK * checking whether the namespace can be unloaded cleanly ... [1s/1s] OK * checking loading without being on the library search path ... [1s/1s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [6s/6s] OK * checking Rd files ... [0s/0s] OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... [7s/7s] OK * checking for unstated dependencies in vignettes ... NOTE 'library' or 'require' calls not declared from: ‘bartMachine’ ‘caret’ ‘gbm’ ‘keras’ * checking package vignettes ... OK * checking re-building of vignette outputs ... [18s/24s] ERROR Error(s) in re-building vignettes: ... --- re-building ‘bartMachineVivid.Rmd’ using rmarkdown Quitting from lines 35-37 [unnamed-chunk-2] (bartMachineVivid.Rmd) Error: processing vignette 'bartMachineVivid.Rmd' failed with diagnostics: there is no package called 'bartMachine' --- failed re-building ‘bartMachineVivid.Rmd’ --- re-building ‘caretVivid.Rmd’ using rmarkdown Quitting from lines 31-33 [setup] (caretVivid.Rmd) Error: processing vignette 'caretVivid.Rmd' failed with diagnostics: there is no package called 'caret' --- failed re-building ‘caretVivid.Rmd’ --- re-building ‘gbmVivid.Rmd’ using rmarkdown Quitting from lines 36-38 [unnamed-chunk-2] (gbmVivid.Rmd) Error: processing vignette 'gbmVivid.Rmd' failed with diagnostics: there is no package called 'gbm' --- failed re-building ‘gbmVivid.Rmd’ --- re-building ‘kerasVivid.Rmd’ using rmarkdown Quitting from lines 30-32 [unnamed-chunk-2] (kerasVivid.Rmd) Error: processing vignette 'kerasVivid.Rmd' failed with diagnostics: there is no package called 'keras' --- failed re-building ‘kerasVivid.Rmd’ --- re-building ‘mlrVivid.Rmd’ using rmarkdown --- finished re-building ‘mlrVivid.Rmd’ --- re-building ‘randomForestVivid.Rmd’ using rmarkdown --- finished re-building ‘randomForestVivid.Rmd’ --- re-building ‘rangerVivid.Rmd’ using rmarkdown --- finished re-building ‘rangerVivid.Rmd’ --- re-building ‘svmVivid.Rmd’ using rmarkdown --- finished re-building ‘svmVivid.Rmd’ --- re-building ‘vividVignette.Rmd’ using rmarkdown --- finished re-building ‘vividVignette.Rmd’ --- re-building ‘xgbVivid.Rmd’ using rmarkdown --- finished re-building ‘xgbVivid.Rmd’ SUMMARY: processing the following files failed: ‘bartMachineVivid.Rmd’ ‘caretVivid.Rmd’ ‘gbmVivid.Rmd’ ‘kerasVivid.Rmd’ Error: Vignette re-building failed. Execution halted * checking PDF version of manual ... [3s/3s] OK * checking HTML version of manual ... [0s/0s] OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 1 ERROR, 3 NOTEs