downloading reverse dependencies ‘OmopViewer’, ‘CodelistGenerator’, ‘CohortCharacteristics’, ‘CohortConstructor’, ‘CohortSurvival’, ‘CohortSymmetry’, ‘DrugUtilisation’, ‘IncidencePrevalence’, ‘MeasurementDiagnostics’, ‘OmopConstructor’, ‘OmopSketch’, ‘PhenotypeR’ trying URL 'file:///data/Repositories/CRAN/src/contrib/OmopViewer_0.6.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/CodelistGenerator_4.0.2.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/CohortCharacteristics_1.1.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/CohortConstructor_0.6.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/CohortSurvival_1.1.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/CohortSymmetry_0.2.4.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/DrugUtilisation_1.1.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/IncidencePrevalence_1.2.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/MeasurementDiagnostics_0.2.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/OmopConstructor_0.1.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/OmopSketch_1.0.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/PhenotypeR_0.3.1.tar.gz' installing dependencies ‘CirceR’, ‘CohortCharacteristics’, ‘CohortConstructor’, ‘CohortSurvival’, ‘dplyr’, ‘DrugUtilisation’, ‘ggplot2’, ‘IncidencePrevalence’, ‘MeasurementDiagnostics’, ‘omock’, ‘OmopSketch’, ‘OmopViewer’, ‘reactablefmtr’, ‘shiny.fluent’, ‘shinyTree’, ‘visOmopResults’ also installing the dependency ‘shiny.react’ begin installing package ‘shiny.react’ begin installing package ‘shinyTree’ begin installing package ‘CirceR’ begin installing package ‘dplyr’ begin installing package ‘ggplot2’ * installing *source* package ‘shiny.react’ ... ** this is package ‘shiny.react’ version ‘0.4.0’ ** package ‘shiny.react’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (shiny.react) begin installing package ‘shiny.fluent’ * installing *source* package ‘CirceR’ ... ** this is package ‘CirceR’ version ‘1.3.3’ ** package ‘CirceR’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (CirceR) * installing *source* package ‘shinyTree’ ... ** this is package ‘shinyTree’ version ‘0.3.1’ ** package ‘shinyTree’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (shinyTree) * installing *source* package ‘shiny.fluent’ ... ** this is package ‘shiny.fluent’ version ‘0.4.0’ ** package ‘shiny.fluent’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (shiny.fluent) * installing *source* package ‘dplyr’ ... ** this is package ‘dplyr’ version ‘1.2.0’ ** package ‘dplyr’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-12) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpbBC54x/R.INSTALL31a1ec6efaf32d/dplyr/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c chop.cpp -o chop.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c filter.cpp -o filter.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c funs.cpp -o funs.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c group_by.cpp -o group_by.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c group_data.cpp -o group_data.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c imports.cpp -o imports.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c init.cpp -o init.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c mask.cpp -o mask.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c mutate.cpp -o mutate.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c reconstruct.cpp -o reconstruct.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c slice.cpp -o slice.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c summarise.cpp -o summarise.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o dplyr.so chop.o filter.o funs.o group_by.o group_data.o imports.o init.o mask.o mutate.o reconstruct.o slice.o summarise.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpbBC54x/R.INSTALL31a1ec6efaf32d/dplyr/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-dplyr/00new/dplyr/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (dplyr) begin installing package ‘CohortCharacteristics’ begin installing package ‘IncidencePrevalence’ begin installing package ‘CohortSurvival’ begin installing package ‘CohortConstructor’ begin installing package ‘reactablefmtr’ begin installing package ‘visOmopResults’ begin installing package ‘DrugUtilisation’ begin installing package ‘omock’ * installing *source* package ‘CohortSurvival’ ... ** this is package ‘CohortSurvival’ version ‘1.1.0’ ** package ‘CohortSurvival’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (CohortSurvival) * installing *source* package ‘visOmopResults’ ... ** this is package ‘visOmopResults’ version ‘1.4.2’ ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (visOmopResults) begin installing package ‘OmopViewer’ * installing *source* package ‘CohortCharacteristics’ ... ** this is package ‘CohortCharacteristics’ version ‘1.1.1’ ** package ‘CohortCharacteristics’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (CohortCharacteristics) * installing *source* package ‘IncidencePrevalence’ ... ** this is package ‘IncidencePrevalence’ version ‘1.2.1’ ** package ‘IncidencePrevalence’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (IncidencePrevalence) * installing *source* package ‘DrugUtilisation’ ... ** this is package ‘DrugUtilisation’ version ‘1.1.0’ ** package ‘DrugUtilisation’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (DrugUtilisation) * installing *source* package ‘reactablefmtr’ ... ** this is package ‘reactablefmtr’ version ‘2.0.0’ ** package ‘reactablefmtr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (reactablefmtr) * installing *source* package ‘CohortConstructor’ ... ** this is package ‘CohortConstructor’ version ‘0.6.1’ ** package ‘CohortConstructor’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (CohortConstructor) begin installing package ‘MeasurementDiagnostics’ begin installing package ‘OmopSketch’ * installing *source* package ‘OmopViewer’ ... ** this is package ‘OmopViewer’ version ‘0.6.0’ ** package ‘OmopViewer’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (OmopViewer) * installing *source* package ‘MeasurementDiagnostics’ ... ** this is package ‘MeasurementDiagnostics’ version ‘0.2.0’ ** package ‘MeasurementDiagnostics’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (MeasurementDiagnostics) * installing *source* package ‘ggplot2’ ... ** this is package ‘ggplot2’ version ‘4.0.2’ ** package ‘ggplot2’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ggplot2) * installing *source* package ‘OmopSketch’ ... ** this is package ‘OmopSketch’ version ‘1.0.0’ ** package ‘OmopSketch’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (OmopSketch) * installing *source* package ‘omock’ ... ** this is package ‘omock’ version ‘0.6.1’ ** package ‘omock’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (omock) checking visOmopResults_1.4.2.tar.gz ... checking OmopViewer_0.6.0.tar.gz ... checking CodelistGenerator_4.0.2.tar.gz ... checking CohortCharacteristics_1.1.1.tar.gz ... checking CohortConstructor_0.6.1.tar.gz ... checking CohortSurvival_1.1.0.tar.gz ... checking CohortSymmetry_0.2.4.tar.gz ... checking DrugUtilisation_1.1.0.tar.gz ... checking IncidencePrevalence_1.2.1.tar.gz ... checking MeasurementDiagnostics_0.2.0.tar.gz ... checking OmopConstructor_0.1.0.tar.gz ... checking OmopSketch_1.0.0.tar.gz ... checking PhenotypeR_0.3.1.tar.gz ... Depends: Package: visOmopResults Depends: R (>= 4.1) Imports: brand.yml, cli, dplyr, generics, glue, omopgenerics (>= 0.3.1), purrr, rlang, stringr, systemfonts, tidyr Timings: user system elapsed visOmopResults 175.409 7.941 160.642 Results: Check status summary: ERROR NOTE OK Source packages 0 1 0 Reverse depends 1 0 11 Check results summary: visOmopResults ... NOTE * checking CRAN incoming feasibility ... [5s/8s] NOTE rdepends_CodelistGenerator ... OK rdepends_CohortCharacteristics ... OK rdepends_CohortConstructor ... OK rdepends_CohortSurvival ... OK rdepends_CohortSymmetry ... OK rdepends_DrugUtilisation ... OK rdepends_IncidencePrevalence ... OK rdepends_MeasurementDiagnostics ... OK rdepends_OmopConstructor ... OK rdepends_OmopSketch ... OK rdepends_OmopViewer ... ERROR * checking tests ... [27s/15s] ERROR rdepends_PhenotypeR ... OK Check results changes: Package: OmopConstructor Check: re-building of vignette outputs Old result: ERROR New result: OK Package: OmopSketch Check: re-building of vignette outputs Old result: ERROR New result: OK Package: PhenotypeR Check: re-building of vignette outputs Old result: ERROR New result: OK