R Under development (unstable) (2025-05-23 r88232 ucrt) -- "Unsuffered Consequences"
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> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
> 
> library(testthat)
> library(viralmodels)
> 
> test_check("viralmodels")

Attaching package: 'dplyr'

The following object is masked from 'package:testthat':

    matches

The following objects are masked from 'package:stats':

    filter, lag

The following objects are masked from 'package:base':

    intersect, setdiff, setequal, union


Attaching package: 'magrittr'

The following objects are masked from 'package:testthat':

    equals, is_less_than, not

Loading required package: parsnip
Loading required package: Matrix
Loaded glmnet 4.1-9
i Creating pre-processing data to finalize unknown parameter: mtry
! Fold1, Repeat1: preprocessor 1/1, model 1/2:
  ! 40 samples were requested but there were 28 rows in the data.
  i 28 samples will be used.
! Fold1, Repeat1: internal: A correlation computation is required, but `estimate` is constant and ha...
! Fold2, Repeat1: preprocessor 1/1, model 1/2:
  ! 40 samples were requested but there were 28 rows in the data.
  i 28 samples will be used.
! Fold2, Repeat1: internal: A correlation computation is required, but `estimate` is constant and ha...
! Fold3, Repeat1: preprocessor 1/1, model 1/2:
  ! 40 samples were requested but there were 28 rows in the data.
  i 28 samples will be used.
! Fold3, Repeat1: internal: A correlation computation is required, but `estimate` is constant and ha...
! Fold4, Repeat1: preprocessor 1/1, model 1/2:
  ! 40 samples were requested but there were 28 rows in the data.
  i 28 samples will be used.
! Fold4, Repeat1: internal: A correlation computation is required, but `estimate` is constant and ha...
! Fold5, Repeat1: preprocessor 1/1, model 1/2:
  ! 40 samples were requested but there were 28 rows in the data.
  i 28 samples will be used.
! Fold5, Repeat1: internal: A correlation computation is required, but `estimate` is constant and ha...
! Fold1, Repeat2: preprocessor 1/1, model 1/2:
  ! 40 samples were requested but there were 28 rows in the data.
  i 28 samples will be used.
! Fold1, Repeat2: internal: A correlation computation is required, but `estimate` is constant and ha...
! Fold2, Repeat2: preprocessor 1/1, model 1/2:
  ! 40 samples were requested but there were 28 rows in the data.
  i 28 samples will be used.
! Fold2, Repeat2: internal: A correlation computation is required, but `estimate` is constant and ha...
! Fold3, Repeat2: preprocessor 1/1, model 1/2:
  ! 40 samples were requested but there were 28 rows in the data.
  i 28 samples will be used.
! Fold3, Repeat2: internal: A correlation computation is required, but `estimate` is constant and ha...
! Fold4, Repeat2: preprocessor 1/1, model 1/2:
  ! 40 samples were requested but there were 28 rows in the data.
  i 28 samples will be used.
! Fold4, Repeat2: internal: A correlation computation is required, but `estimate` is constant and ha...
! Fold5, Repeat2: preprocessor 1/1, model 1/2:
  ! 40 samples were requested but there were 28 rows in the data.
  i 28 samples will be used.
! Fold5, Repeat2: internal: A correlation computation is required, but `estimate` is constant and ha...
i Creating pre-processing data to finalize unknown parameter: mtry
[ FAIL 0 | WARN 46 | SKIP 4 | PASS 0 ]

══ Skipped tests (4) ═══════════════════════════════════════════════════════════
• On CRAN (4): 'test-viralmodel.R:32:3', 'test-viralpreds.R:34:3',
  'test-viraltab.R:31:3', 'test-viralvis.R:31:3'

[ FAIL 0 | WARN 46 | SKIP 4 | PASS 0 ]
> 
> proc.time()
   user  system elapsed 
  51.85    1.00   52.73