R Under development (unstable) (2024-10-17 r87242 ucrt) -- "Unsuffered Consequences" Copyright (C) 2024 The R Foundation for Statistical Computing Platform: x86_64-w64-mingw32/x64 R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(viralmodels) > > test_check("viralmodels") -- Attaching core tidyverse packages ------------------------ tidyverse 2.0.0 -- v dplyr 1.1.4 v readr 2.1.5 v forcats 1.0.0 v stringr 1.5.1 v ggplot2 3.5.1 v tibble 3.2.1 v lubridate 1.9.3 v tidyr 1.3.1 v purrr 1.0.2 -- Conflicts ------------------------------------------ tidyverse_conflicts() -- x readr::edition_get() masks testthat::edition_get() x dplyr::filter() masks stats::filter() x purrr::is_null() masks testthat::is_null() x dplyr::lag() masks stats::lag() x readr::local_edition() masks testthat::local_edition() x dplyr::matches() masks tidyr::matches(), testthat::matches() i Use the conflicted package () to force all conflicts to become errors Loading required package: parsnip Attaching package: 'kernlab' The following object is masked from 'package:purrr': cross The following object is masked from 'package:ggplot2': alpha Loading required package: Matrix Attaching package: 'Matrix' The following objects are masked from 'package:tidyr': expand, pack, unpack Loaded glmnet 4.1-8 ! Fold3, Repeat1: internal: A correlation computation is required, but `estimate` is constant and ha... i Creating pre-processing data to finalize unknown parameter: mtry ! Fold1: preprocessor 1/1, model 1/1: 29 samples were requested but there were 17 rows in the data. 17 will be... ! Fold1: internal: A correlation computation is required, but `estimate` is constant and ha... ! Fold2: preprocessor 1/1, model 1/1: 29 samples were requested but there were 18 rows in the data. 18 will be... ! Fold2: internal: A correlation computation is required, but `estimate` is constant and ha... [ FAIL 0 | WARN 0 | SKIP 4 | PASS 0 ] ══ Skipped tests (4) ═══════════════════════════════════════════════════════════ • On CRAN (4): 'test-viralmodel.R:32:3', 'test-viralpreds.R:31:3', 'test-viraltab.R:29:3', 'test-viralvis.R:30:3' [ FAIL 0 | WARN 0 | SKIP 4 | PASS 0 ] > > proc.time() user system elapsed 69.79 1.85 71.68