* using log directory 'd:/RCompile/CRANincoming/R-devel/vipor.Rcheck'
* using R Under development (unstable) (2023-12-13 r85679 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 12.3.0
    GNU Fortran (GCC) 12.3.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* checking for file 'vipor/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'vipor' version '0.4.6'
* checking CRAN incoming feasibility ... [29s] NOTE
Maintainer: 'Scott Sherrill-Mix <ssm@msu.edu>'

New maintainer:
  Scott Sherrill-Mix <ssm@msu.edu>
Old maintainer(s):
  Scott Sherrill-Mix <shescott@upenn.edu>

Found the following (possibly) invalid URLs:
  URL: http://en.wikipedia.org/wiki/Van_der_Corput_sequence (moved to https://en.wikipedia.org/wiki/Van_der_Corput_sequence)
    From: README.md
    Status: 301
    Message: Moved Permanently
  URL: http://factfinder.census.gov/bkmk/table/1.0/en/DEC/10_SF1/GCTPH1.US05PR
    From: man/counties.Rd
    Status: Error
    Message: Failed to connect to factfinder.census.gov port 80 after 21043 ms: Couldn't connect to server
  URL: http://github.com/sherrillmix/vipor (moved to https://github.com/sherrillmix/vipor)
    From: man/vipor.Rd
    Status: 301
    Message: Moved Permanently
  URL: http://www.retrovirology.com/content/10/1/90 (moved to https://retrovirology.biomedcentral.com/articles/10.1186/1742-4690-10-90)
    From: man/integrations.Rd
    Status: 301
    Message: Moved Permanently
  URL: http://www.retrovirology.com/content/10/1/90/additional (moved to https://retrovirology.biomedcentral.com/articles/10.1186/1742-4690-10-90)
    From: man/integrations.Rd
    Status: 301
    Message: Moved Permanently
  URL: https://codecov.io/github/sherrillmix/vipor?branch=master (moved to https://app.codecov.io/github/sherrillmix/vipor?branch=master)
    From: README.md
    Status: 301
    Message: Moved Permanently
  URL: https://www.census.gov/prod/cen2010/cph-2-1.pdf
    From: man/counties.Rd
    Status: 404
    Message: Not Found
  For content that is 'Moved Permanently', please change http to https,
  add trailing slashes, or replace the old by the new URL.
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'vipor' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking sizes of PDF files under 'inst/doc' ... OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ... OK
* checking for unstated dependencies in 'tests' ... OK
* checking tests ... OK
  Running 'testthat.R'
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking re-building of vignette outputs ... [23s] OK
* checking PDF version of manual ... [13s] OK
* checking HTML version of manual ... OK
* DONE
Status: 1 NOTE