downloading reverse dependencies ... downloading vegtable_0.1.10.tar.gz ... ok downloading goeveg_0.7.9.tar.gz ... ok installing dependencies ‘biblio’, ‘BiodiversityR’, ‘indicspecies’, ‘taxlist’, ‘vegdata’, ‘xml2’ also installing the dependencies ‘rcrossref’, ‘yamlme’ begin installing package ‘yamlme’ begin installing package ‘indicspecies’ begin installing package ‘BiodiversityR’ begin installing package ‘xml2’ * installing *source* package ‘yamlme’ ... ** this is package ‘yamlme’ version ‘0.1.2’ ** package ‘yamlme’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (yamlme) * installing *source* package ‘indicspecies’ ... ** this is package ‘indicspecies’ version ‘1.8.0’ ** package ‘indicspecies’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (indicspecies) * installing *source* package ‘xml2’ ... ** this is package ‘xml2’ version ‘1.5.1’ ** package ‘xml2’ successfully unpacked and MD5 sums checked ** using staged installation Found pkg-config cflags and libs! Using PKG_CFLAGS=-I/usr/include/libxml2 Using PKG_LIBS=-lxml2 ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-7) 15.2.0’ using C++ compiler: ‘g++-15 (Debian 15.2.0-7) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpuIJ7Wt/R.INSTALL398163086ab39/xml2/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -DU_SHOW_CPLUSPLUS_API=0 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c connection.cpp -o connection.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -DU_SHOW_CPLUSPLUS_API=0 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -DU_SHOW_CPLUSPLUS_API=0 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c xml2_doc.cpp -o xml2_doc.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -DU_SHOW_CPLUSPLUS_API=0 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c xml2_init.c -o xml2_init.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -DU_SHOW_CPLUSPLUS_API=0 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c xml2_namespace.cpp -o xml2_namespace.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -DU_SHOW_CPLUSPLUS_API=0 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c xml2_node.cpp -o xml2_node.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -DU_SHOW_CPLUSPLUS_API=0 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c xml2_output.cpp -o xml2_output.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -DU_SHOW_CPLUSPLUS_API=0 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c xml2_schema.cpp -o xml2_schema.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -DU_SHOW_CPLUSPLUS_API=0 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c xml2_url.cpp -o xml2_url.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -DU_SHOW_CPLUSPLUS_API=0 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c xml2_xpath.cpp -o xml2_xpath.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o xml2.so connection.o init.o xml2_doc.o xml2_init.o xml2_namespace.o xml2_node.o xml2_output.o xml2_schema.o xml2_url.o xml2_xpath.o -lxml2 -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpuIJ7Wt/R.INSTALL398163086ab39/xml2/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-xml2/00new/xml2/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (xml2) begin installing package ‘rcrossref’ begin installing package ‘vegdata’ * installing *source* package ‘vegdata’ ... ** this is package ‘vegdata’ version ‘1.9.15’ ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (vegdata) * installing *source* package ‘rcrossref’ ... ** this is package ‘rcrossref’ version ‘1.2.1’ ** package ‘rcrossref’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rcrossref) begin installing package ‘biblio’ * installing *source* package ‘biblio’ ... ** this is package ‘biblio’ version ‘0.0.12’ ** package ‘biblio’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading in method for ‘coerce’ with signature ‘"lib_df","bibentry"’: no definition for class “bibentry” in method for ‘coerce’ with signature ‘"bibentry","lib_df"’: no definition for class “bibentry” ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (biblio) begin installing package ‘taxlist’ * installing *source* package ‘taxlist’ ... ** this is package ‘taxlist’ version ‘0.3.5’ ** package ‘taxlist’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading Creating a new generic function for ‘print’ in package ‘taxlist’ ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (taxlist) * installing *source* package ‘BiodiversityR’ ... ** this is package ‘BiodiversityR’ version ‘2.17-4’ ** package ‘BiodiversityR’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (BiodiversityR) checking vegdata_1.9.15.tar.gz ... checking vegtable_0.1.10.tar.gz ... checking goeveg_0.7.9.tar.gz ... Depends: Package: vegdata Depends: foreign, R (>= 3.5.0) Imports: curl (>= 2.4), DBI (>= 0.6-1), dbplyr (>= 1.0.0), dplyr (>= 0.7.0), hoardr (>= 0.1.0), data.table, forcats, magrittr (>= 1.5), plyr, RSQLite (>= 1.1.2), stringr, utils, xml2 Timings: user system elapsed vegdata 57.012 5.927 64.206 Results: Check status summary: OK Source packages 1 Reverse depends 2 Check results summary: vegdata ... OK rdepends_goeveg ... OK rdepends_vegtable ... OK