downloading reverse dependencies ...
downloading EcotoneFinder_0.2.3.tar.gz ... ok
downloading WeightedCluster_1.8-1.tar.gz ... ok
downloading ecotraj_1.1.0.tar.gz ... ok
downloading ppclust_1.1.0.1.tar.gz ... ok

installing dependencies ‘DirichletReg’, ‘fclust’, ‘inaparc’, ‘Rmisc’,
  ‘vegclust’

also installing the dependency ‘kpeaks’

begin installing package ‘kpeaks’
begin installing package ‘Rmisc’
begin installing package ‘vegclust’
begin installing package ‘fclust’
begin installing package ‘DirichletReg’
* installing *source* package ‘kpeaks’ ...
** this is package ‘kpeaks’ version ‘1.1.0’
** package ‘kpeaks’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (kpeaks)
begin installing package ‘inaparc’
* installing *source* package ‘Rmisc’ ...
** this is package ‘Rmisc’ version ‘1.5.1’
** package ‘Rmisc’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (Rmisc)
* installing *source* package ‘DirichletReg’ ...
** this is package ‘DirichletReg’ version ‘0.7-1’
** package ‘DirichletReg’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-14 (Debian 14.2.0-19) 14.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpUtt9NM/R.INSTALL269a32590e9d12/DirichletReg/src'
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG   -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c ddirichlet.c -o ddirichlet.o
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG   -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c init.c -o init.o
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG   -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c rdirichlet.c -o rdirichlet.o
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG   -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c wght_LL.c -o wght_LL.o
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG   -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c wght_LL_grad_alternative.c -o wght_LL_grad_alternative.o
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG   -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c wght_LL_grad_common.c -o wght_LL_grad_common.o
gcc-14 -std=gnu23 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o DirichletReg.so ddirichlet.o init.o rdirichlet.o wght_LL.o wght_LL_grad_alternative.o wght_LL_grad_common.o -L/home/hornik/tmp/R/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpUtt9NM/R.INSTALL269a32590e9d12/DirichletReg/src'
installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-DirichletReg/00new/DirichletReg/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (DirichletReg)
* installing *source* package ‘inaparc’ ...
** this is package ‘inaparc’ version ‘1.2.0’
** package ‘inaparc’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (inaparc)
* installing *source* package ‘vegclust’ ...
** this is package ‘vegclust’ version ‘2.0.3’
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (vegclust)
* installing *source* package ‘fclust’ ...
** this is package ‘fclust’ version ‘2.1.1.1’
** package ‘fclust’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-14 (Debian 14.2.0-19) 14.2.0’
using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpqZ9iK9/R.INSTALL269a2d46b49b57/fclust/src'
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c F.cpp -o F.o
F.cpp: In function ‘arma::cube F_gkb(arma::mat, arma::mat, arma::mat, arma::mat, double, double, unsigned int, unsigned int, int, double, arma::vec)’:
F.cpp:36:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
   36 |   for(int i=0; i<k; i++)
      |                ~^~
F.cpp:39:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
   39 |     for(int j=0; j<n; j++)
      |                  ~^~
F.cpp: In function ‘arma::cube F_gkb_ent(arma::mat, arma::mat, arma::mat, arma::mat, double, unsigned int, unsigned int, int, double, arma::vec)’:
F.cpp:96:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
   96 |   for(int i=0; i<k; i++)
      |                ~^~
F.cpp:99:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
   99 |     for(int j=0; j<n; j++)
      |                  ~^~
F.cpp: In function ‘arma::cube F_gk(arma::mat, arma::mat, arma::mat, double, unsigned int, unsigned int, int, arma::vec)’:
F.cpp:146:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  146 |   for(int i = 0; i<k; i++)
      |                  ~^~
F.cpp:148:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  148 |     for(int j=0; j<n; j++)
      |                  ~^~
F.cpp: In function ‘arma::cube F_gk_ent(arma::mat, arma::mat, arma::mat, unsigned int, unsigned int, int, arma::vec)’:
F.cpp:172:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  172 |   for(int i = 0; i<k; i++)
      |                  ~^~
F.cpp:174:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  174 |     for(int j=0; j<n; j++)
      |                  ~^~
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c FKM_rcpp.cpp -o FKM_rcpp.o
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM(arma::mat, double, unsigned int, unsigned int, unsigned int, unsigned int, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:57:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
   57 |   for(int r=0; r<rs; r++)
      |                ~^~~
FKM_rcpp.cpp:68:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
   68 |     while(prova && (iter < maxit))
      |                     ~~~~~^~~~~~~
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM_U(arma::mat, double, unsigned int, unsigned int, unsigned int, arma::mat, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:145:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  145 |   while(prova && (iter < maxit))
      |                   ~~~~~^~~~~~~
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM_ent(arma::mat, double, unsigned int, unsigned int, unsigned int, unsigned int, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:228:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  228 |   for(int r=0; r<rs; r++)
      |                ~^~~
FKM_rcpp.cpp:240:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  240 |     while(prova && (iter < maxit))
      |                     ~~~~~^~~~~~~
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM_ent_U(arma::mat, double, unsigned int, unsigned int, unsigned int, arma::mat, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:323:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  323 |   while(prova && (iter < maxit))
      |                   ~~~~~^~~~~~~
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM_noise(arma::mat, double, double, unsigned int, unsigned int, unsigned int, unsigned int, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:401:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  401 |   for(int r=0; r<rs; r++)
      |                ~^~~
FKM_rcpp.cpp:419:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  419 |     while(prova && (iter < maxit))
      |                     ~~~~~^~~~~~~
FKM_rcpp.cpp:429:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  429 |       for(int i=0; i<n;i++)
      |                    ~^~
FKM_rcpp.cpp:446:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  446 |           for(int j=0; j<k;j++)
      |                        ~^~
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM_noise_U(arma::mat, double, double, unsigned int, unsigned int, unsigned int, arma::mat, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:558:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  558 |   while(prova && (iter < maxit))
      |                   ~~~~~^~~~~~~
FKM_rcpp.cpp:568:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  568 |     for(int i=0; i<n;i++)
      |                  ~^~
FKM_rcpp.cpp:582:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  582 |         for(int j=0; j<k;j++)
      |                      ~^~
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM_pf(arma::mat, double, unsigned int, unsigned int, unsigned int, unsigned int, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:679:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  679 |   for(int r=0; r<rs; r++)
      |                ~^~~
FKM_rcpp.cpp:690:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  690 |     while(prova && (iter < maxit))
      |                     ~~~~~^~~~~~~
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM_pf_U(arma::mat, double, unsigned int, unsigned int, unsigned int, arma::mat, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:772:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  772 |   while(prova && (iter < maxit))
      |                   ~~~~~^~~~~~~
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM_ent_noise(arma::mat, double, double, unsigned int, unsigned int, unsigned int, unsigned int, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:857:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  857 |   for(int r=0; r<rs; r++)
      |                ~^~~
FKM_rcpp.cpp:868:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  868 |     while(prova && (iter < maxit))
      |                     ~~~~~^~~~~~~
FKM_rcpp.cpp:878:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  878 |       for(int i=0; i<n;i++)
      |                    ~^~
FKM_rcpp.cpp:892:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  892 |           for(int j=0; j<k;j++)
      |                        ~^~
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM_ent_noise_U(arma::mat, double, double, unsigned int, unsigned int, unsigned int, arma::mat, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:990:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  990 |   while(prova && (iter < maxit))
      |                   ~~~~~^~~~~~~
FKM_rcpp.cpp:1000:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 1000 |     for(int i=0; i<n;i++)
      |                  ~^~
FKM_rcpp.cpp:1014:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 1014 |         for(int j=0; j<k;j++)
      |                      ~^~
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM_pf_noise(arma::mat, double, double, unsigned int, unsigned int, unsigned int, unsigned int, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:1112:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 1112 |   for(int r=0; r<rs; r++)
      |                ~^~~
FKM_rcpp.cpp:1125:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 1125 |     while(prova && (iter < maxit))
      |                     ~~~~~^~~~~~~
FKM_rcpp.cpp:1135:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 1135 |       for(int i=0; i<n;i++)
      |                    ~^~
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM_pf_noise_U(arma::mat, double, double, unsigned int, unsigned int, unsigned int, arma::mat, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:1276:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 1276 |   while(prova && (iter < maxit))
      |                   ~~~~~^~~~~~~
FKM_rcpp.cpp:1286:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 1286 |     for(int i=0; i<n;i++)
      |                  ~^~
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM_gkb(arma::mat, double, double, double, arma::vec, unsigned int, unsigned int, unsigned int, unsigned int, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:1417:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 1417 |   for(int r=0; r<rs; r++)
      |                ~^~~
FKM_rcpp.cpp:1428:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 1428 |     while(prova && (iter < maxit))
      |                     ~~~~~^~~~~~~
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM_gkb_U(arma::mat, double, double, double, arma::vec, unsigned int, unsigned int, unsigned int, arma::mat, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:1520:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 1520 |   while(prova && (iter < maxit))
      |                   ~~~~~^~~~~~~
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM_gkb_ent(arma::mat, double, double, double, arma::vec, unsigned int, unsigned int, unsigned int, unsigned int, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:1611:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 1611 |   for(int r=0; r<rs; r++)
      |                ~^~~
FKM_rcpp.cpp:1622:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 1622 |     while(prova && (iter < maxit))
      |                     ~~~~~^~~~~~~
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM_gkb_ent_U(arma::mat, double, double, double, arma::vec, unsigned int, unsigned int, unsigned int, arma::mat, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:1715:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 1715 |   while(prova && (iter < maxit))
      |                   ~~~~~^~~~~~~
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM_gkb_noise(arma::mat, double, double, double, double, arma::vec, unsigned int, unsigned int, unsigned int, unsigned int, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:1807:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 1807 |   for(int r=0; r<rs; r++)
      |                ~^~~
FKM_rcpp.cpp:1824:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 1824 |     while(prova && (iter < maxit))
      |                     ~~~~~^~~~~~~
FKM_rcpp.cpp:1836:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 1836 |       for(int i=0; i<n;i++)
      |                    ~^~
FKM_rcpp.cpp:1850:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 1850 |           for(int j=0; j<k;j++)
      |                        ~^~
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM_gkb_noise_U(arma::mat, double, double, double, double, arma::vec, unsigned int, unsigned int, unsigned int, arma::mat, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:1973:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 1973 |   while(prova && (iter < maxit))
      |                   ~~~~~^~~~~~~
FKM_rcpp.cpp:1985:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 1985 |     for(int i=0; i<n;i++)
      |                  ~^~
FKM_rcpp.cpp:1999:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 1999 |         for(int j=0; j<k;j++)
      |                      ~^~
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM_gkb_ent_noise(arma::mat, double, double, double, double, arma::vec, unsigned int, unsigned int, unsigned int, unsigned int, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:2113:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 2113 |   for(int r=0; r<rs; r++)
      |                ~^~~
FKM_rcpp.cpp:2123:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 2123 |     while(prova && (iter < maxit))
      |                     ~~~~~^~~~~~~
FKM_rcpp.cpp:2135:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 2135 |       for(int i=0; i<n;i++)
      |                    ~^~
FKM_rcpp.cpp:2149:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 2149 |           for(int j=0; j<k;j++)
      |                        ~^~
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM_gkb_ent_noise_U(arma::mat, double, double, double, double, arma::vec, unsigned int, unsigned int, unsigned int, arma::mat, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:2256:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 2256 |   while(prova && (iter < maxit))
      |                   ~~~~~^~~~~~~
FKM_rcpp.cpp:2268:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 2268 |     for(int i=0; i<n;i++)
      |                  ~^~
FKM_rcpp.cpp:2282:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 2282 |         for(int j=0; j<k;j++)
      |                      ~^~
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM_gk(arma::mat, double, arma::vec, unsigned int, unsigned int, unsigned int, unsigned int, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:2385:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 2385 |   for(int r=0; r<rs; r++)
      |                ~^~~
FKM_rcpp.cpp:2396:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 2396 |     while(prova && (iter < maxit))
      |                     ~~~~~^~~~~~~
FKM_rcpp.cpp:2475:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 2475 |   if(countNoConv == rs)
      |      ~~~~~~~~~~~~^~~~~
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM_gk_U(arma::mat, double, arma::vec, unsigned int, unsigned int, unsigned int, arma::mat, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:2526:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 2526 |   while(prova && (iter < maxit))
      |                   ~~~~~^~~~~~~
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM_gk_ent(arma::mat, double, arma::vec, unsigned int, unsigned int, unsigned int, unsigned int, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:2644:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 2644 |   for(int r=0; r<rs; r++)
      |                ~^~~
FKM_rcpp.cpp:2653:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 2653 |     while(prova && (iter < maxit))
      |                     ~~~~~^~~~~~~
FKM_rcpp.cpp:2730:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 2730 |   if(countNoConv == rs)
      |      ~~~~~~~~~~~~^~~~~
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM_gk_ent_U(arma::mat, double, arma::vec, unsigned int, unsigned int, unsigned int, arma::mat, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:2779:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 2779 |   while(prova && (iter < maxit))
      |                   ~~~~~^~~~~~~
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM_gk_noise(arma::mat, double, double, arma::vec, unsigned int, unsigned int, unsigned int, unsigned int, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:2899:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 2899 |   for(int r=0; r<rs; r++)
      |                ~^~~
FKM_rcpp.cpp:2908:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 2908 |     while(prova && (iter < maxit))
      |                     ~~~~~^~~~~~~
FKM_rcpp.cpp:2933:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 2933 |         for(int i=0; i<n;i++)
      |                      ~^~
FKM_rcpp.cpp:2947:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 2947 |             for(int j=0; j<k;j++)
      |                          ~^~
FKM_rcpp.cpp:3008:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 3008 |   if(countNoConv == rs)
      |      ~~~~~~~~~~~~^~~~~
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM_gk_noise_U(arma::mat, double, double, arma::vec, unsigned int, unsigned int, unsigned int, arma::mat, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:3066:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 3066 |   while(prova && (iter < maxit))
      |                   ~~~~~^~~~~~~
FKM_rcpp.cpp:3088:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 3088 |       for(int i=0; i<n;i++)
      |                    ~^~
FKM_rcpp.cpp:3101:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 3101 |           for(int j=0; j<k;j++)
      |                        ~^~
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM_gk_ent_noise(arma::mat, double, double, arma::vec, unsigned int, unsigned int, unsigned int, unsigned int, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:3219:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 3219 |   for(int r=0; r<rs; r++)
      |                ~^~~
FKM_rcpp.cpp:3228:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 3228 |     while(prova && (iter < maxit))
      |                     ~~~~~^~~~~~~
FKM_rcpp.cpp:3254:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 3254 |         for(int i=0; i<n;i++)
      |                      ~^~
FKM_rcpp.cpp:3268:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 3268 |             for(int j=0; j<k;j++)
      |                          ~^~
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM_gk_ent_noise_U(arma::mat, double, double, arma::vec, unsigned int, unsigned int, unsigned int, arma::mat, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:3377:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 3377 |   while(prova && (iter < maxit))
      |                   ~~~~~^~~~~~~
FKM_rcpp.cpp:3399:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 3399 |       for(int i=0; i<n;i++)
      |                    ~^~
FKM_rcpp.cpp:3413:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 3413 |           for(int j=0; j<k;j++)
      |                        ~^~
FKM_rcpp.cpp:3375:7: warning: variable ‘warn’ set but not used [-Wunused-but-set-variable]
 3375 |   int warn = 0;
      |       ^~~~
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM_med(arma::mat, double, unsigned int, unsigned int, unsigned int, unsigned int, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:3519:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 3519 |   for(int r=0; r<rs; r++)
      |                ~^~~
FKM_rcpp.cpp:3527:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 3527 |     while(prova && (iter < maxit))
      |                     ~~~~~^~~~~~~
FKM_rcpp.cpp:3533:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 3533 |       for(int c = 0; c < k; c++)
      |                      ~~^~~
FKM_rcpp.cpp:3537:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 3537 |         for(int i=0; i<n; i++)
      |                      ~^~
FKM_rcpp.cpp:3545:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 3545 |           for(int j=0; j<n; j++)
      |                        ~^~
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM_med_U(arma::mat, double, unsigned int, unsigned int, unsigned int, arma::mat, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:3664:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 3664 |   while(prova && (iter < maxit))
      |                   ~~~~~^~~~~~~
FKM_rcpp.cpp:3671:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 3671 |     for(int c = 0; c < k; c++)
      |                    ~~^~~
FKM_rcpp.cpp:3675:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 3675 |       for(int i=0; i<n; i++)
      |                    ~^~
FKM_rcpp.cpp:3683:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 3683 |         for(int j=0; j<n; j++)
      |                      ~^~
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM_med_noise(arma::mat, double, double, unsigned int, unsigned int, unsigned int, unsigned int, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:3810:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 3810 |   for(int r=0; r<rs; r++)
      |                ~^~~
FKM_rcpp.cpp:3819:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 3819 |     while(prova && (iter < maxit))
      |                     ~~~~~^~~~~~~
FKM_rcpp.cpp:3825:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 3825 |       for(int c = 0; c < k; c++)
      |                      ~~^~~
FKM_rcpp.cpp:3829:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 3829 |         for(int i=0; i<n; i++)
      |                      ~^~
FKM_rcpp.cpp:3833:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 3833 |           for(int j=0; j<n; j++)
      |                        ~^~
FKM_rcpp.cpp:3854:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 3854 |       for(int i=0; i<n;i++)
      |                    ~^~
FKM_rcpp.cpp:3874:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 3874 |             for(int j=0; j<k;j++)
      |                          ~^~
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM_med_noise_U(arma::mat, double, double, unsigned int, unsigned int, unsigned int, arma::mat, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:4004:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 4004 |   while(prova && (iter < maxit))
      |                   ~~~~~^~~~~~~
FKM_rcpp.cpp:4010:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 4010 |     for(int c = 0; c < k; c++)
      |                    ~~^~~
FKM_rcpp.cpp:4014:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 4014 |       for(int i=0; i<n; i++)
      |                    ~^~
FKM_rcpp.cpp:4018:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 4018 |         for(int j=0; j<n; j++)
      |                      ~^~
FKM_rcpp.cpp:4041:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 4041 |     for(int i=0; i<n;i++)
      |                  ~^~
FKM_rcpp.cpp:4061:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 4061 |           for(int j=0; j<k;j++)
      |                        ~^~
FKM_rcpp.cpp: In function ‘Rcpp::List mainnefrc(arma::mat, double, unsigned int, unsigned int, unsigned int, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:4172:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 4172 |   for(int r=0; r<rs; r++)
      |                ~^~~
FKM_rcpp.cpp:4179:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 4179 |     for(int i=0; i<n;i++){
      |                  ~^~
FKM_rcpp.cpp:4180:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 4180 |       for(int  j=0; j<k;j++)
      |                     ~^~
FKM_rcpp.cpp:4190:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 4190 |     while(prova && (iter < maxit))
      |                     ~~~~~^~~~~~~
FKM_rcpp.cpp:4197:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 4197 |       for(int i=0; i<n;i++){
      |                    ~^~
FKM_rcpp.cpp:4198:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 4198 |         for(int  j=0; j<k;j++)
      |                       ~^~
FKM_rcpp.cpp:4211:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 4211 |           for(int j=0; j < k; j++)
      |                        ~~^~~
FKM_rcpp.cpp:4236:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 4236 |       for(int j = 0; j<k;j++)
      |                      ~^~
FKM_rcpp.cpp: In function ‘Rcpp::List mainnefrc_U(arma::mat, arma::mat, double, unsigned int, unsigned int, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:4327:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 4327 |     while(prova && (iter < maxit))
      |                     ~~~~~^~~~~~~
FKM_rcpp.cpp:4334:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 4334 |       for(int i=0; i<n;i++){
      |                    ~^~
FKM_rcpp.cpp:4335:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 4335 |         for(int  j=0; j<k;j++)
      |                       ~^~
FKM_rcpp.cpp:4348:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 4348 |           for(int j=0; j < k; j++)
      |                        ~~^~~
FKM_rcpp.cpp:4374:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 4374 |       for(int j = 0; j<k;j++)
      |                      ~^~
FKM_rcpp.cpp: In function ‘Rcpp::List mainrnefrc(arma::mat, double, double, unsigned int, unsigned int, unsigned int, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:4467:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 4467 |   for(int r=0; r<rs; r++)
      |                ~^~~
FKM_rcpp.cpp:4474:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 4474 |     while(prova && (iter < maxit))
      |                     ~~~~~^~~~~~~
FKM_rcpp.cpp:4481:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 4481 |       for(int i=0; i<n;i++){
      |                    ~^~
FKM_rcpp.cpp:4482:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 4482 |         for(int  j=0; j<k;j++)
      |                       ~^~
FKM_rcpp.cpp:4504:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 4504 |           for(int j=0; j < k; j++)
      |                        ~~^~~
FKM_rcpp.cpp:4534:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 4534 |       for(int j = 0; j<k;j++)
      |                      ~^~
FKM_rcpp.cpp: In function ‘Rcpp::List mainrnefrc_U(arma::mat, arma::mat, double, double, unsigned int, unsigned int, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:4630:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 4630 |   while(prova && (iter < maxit))
      |                   ~~~~~^~~~~~~
FKM_rcpp.cpp:4637:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 4637 |     for(int i=0; i<n;i++){
      |                  ~^~
FKM_rcpp.cpp:4638:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 4638 |       for(int  j=0; j<k;j++)
      |                     ~^~
FKM_rcpp.cpp:4660:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 4660 |         for(int j=0; j < k; j++)
      |                      ~~^~~
FKM_rcpp.cpp:4690:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 4690 |     for(int j = 0; j<k;j++)
      |                    ~^~
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c RcppExports.cpp -o RcppExports.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c centroids.cpp -o centroids.o
centroids.cpp: In function ‘arma::mat centroids_FKM(arma::mat, arma::mat, unsigned int, unsigned int, unsigned int, double)’:
centroids.cpp:22:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
   22 |   for(int i=0; i<k; i++)
      |                ~^~
centroids.cpp: In function ‘arma::mat centroids_FKM_ent(arma::mat, arma::mat, unsigned int, unsigned int, unsigned int)’:
centroids.cpp:43:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
   43 |   for(int i=0; i<k; i++)
      |                ~^~
centroids.cpp: In function ‘arma::mat centroids_FKM_pf(arma::mat, arma::mat, unsigned int, unsigned int, unsigned int, double)’:
centroids.cpp:69:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
   69 |   for(int i=0; i<k; i++)
      |                ~^~
centroids.cpp: In function ‘Rcpp::List medoids_FKM(arma::mat, arma::mat, unsigned int, unsigned int, unsigned int, double)’:
centroids.cpp:98:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
   98 |   for(int c = 0; c < k; c++)
      |                  ~~^~~
centroids.cpp:102:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  102 |     for(int i=0; i<n; i++)
      |                  ~^~
centroids.cpp:106:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  106 |       for(int j=0; j<n; j++)
      |                    ~^~
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c distance.cpp -o distance.o
distance.cpp: In function ‘arma::mat euclidean_distance(arma::mat, arma::mat, unsigned int, unsigned int, bool)’:
distance.cpp:22:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
   22 |   for(int i=0; i<n; i++)
      |                ~^~
distance.cpp:24:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
   24 |     for(int j=0; j<k; j++)
      |                  ~^~
distance.cpp: In function ‘arma::mat euclidean_distance_gkb(arma::mat, arma::mat, arma::cube, unsigned int, unsigned int, bool)’:
distance.cpp:48:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
   48 |   for(int i=0; i<n; i++)
      |                ~^~
distance.cpp:50:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
   50 |     for(int j=0; j<k; j++)
      |                  ~^~
distance.cpp: In function ‘arma::mat euclidean_distance_gk(arma::mat, arma::mat, arma::cube, arma::mat, unsigned int, unsigned int, unsigned int, bool)’:
distance.cpp:73:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
   73 |   for(int i=0; i<n; i++)
      |                ~^~
distance.cpp:75:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
   75 |     for(int j=0; j<k; j++)
      |                  ~^~
distance.cpp: In function ‘arma::mat euclidean_distance_medoid(arma::mat, arma::mat, unsigned int, unsigned int, bool)’:
distance.cpp:111:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  111 |   for(int i=0; i<n; i++)
      |                ~^~
distance.cpp:113:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  113 |     for(int j=0; j<k; j++)
      |                  ~^~
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c func.cpp -o func.o
func.cpp: In function ‘void distCheck(Rcpp::NumericMatrix, unsigned int, unsigned int)’:
func.cpp:119:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  119 |   for(int i=0; i<n;i++)
      |                ~^~
func.cpp: In function ‘double silhouette_internal(arma::mat, arma::mat, unsigned int, unsigned int, unsigned int, bool)’:
func.cpp:181:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  181 |   for(int i = 0; i<n;i++)
      |                  ~^~
func.cpp:191:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  191 |     for(int i=0;i<(n-1);i++)
      |                 ~^~~~~~
func.cpp:193:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  193 |       for(int i2=(i+1); i2<n;i2++)
      |                         ~~^~
func.cpp:204:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  204 |   for(int i=0;i<n;i++)
      |               ~^~
func.cpp:206:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  206 |     for(int j=0;j<k;j++)
      |                 ~^~
func.cpp:208:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  208 |       for(int i2=0;i2<n;i2++)
      |                    ~~^~
func.cpp:214:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  214 |   for(int i = 0; i<n;i++)
      |                  ~^~
func.cpp:216:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  216 |     for(int j = 0; j<k;j++)
      |                    ~^~
func.cpp: In function ‘Rcpp::List silhouette(arma::mat, arma::mat, unsigned int, unsigned int, unsigned int, bool)’:
func.cpp:264:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  264 |   for(int i = 0; i<n;i++)
      |                  ~^~
func.cpp:274:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  274 |     for(int i=0;i<(n-1);i++)
      |                 ~^~~~~~
func.cpp:276:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  276 |       for(int i2=(i+1); i2<n;i2++)
      |                         ~~^~
func.cpp:290:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  290 |   for(int i=0;i<n;i++)
      |               ~^~
func.cpp:292:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  292 |     for(int j=0;j<k;j++)
      |                 ~^~
func.cpp:294:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  294 |       for(int i2=0;i2<n;i2++)
      |                    ~~^~
func.cpp:296:20: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
  296 |         if(memb(i2)==j){B(i,j) += D(i,i2);}
      |            ~~~~~~~~^~~
func.cpp:300:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  300 |   for(int i = 0; i<n;i++)
      |                  ~^~
func.cpp:302:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  302 |     for(int j = 0; j<k;j++)
      |                    ~^~
func.cpp:304:18: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
  304 |       if(memb(i) == j)
      |          ~~~~~~~~^~~~
func.cpp: In function ‘double silhouetteFuzzy(arma::mat, arma::mat, double, unsigned int, unsigned int, unsigned int, bool)’:
func.cpp:359:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  359 |   for(int i = 0; i<n;i++)
      |                  ~^~
func.cpp:369:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  369 |     for(int i=0;i<(n-1);i++)
      |                 ~^~~~~~
func.cpp:371:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  371 |       for(int i2=(i+1); i2<n;i2++)
      |                         ~~^~
func.cpp:382:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  382 |   for(int i=0;i<n;i++)
      |               ~^~
func.cpp:384:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  384 |     for(int j=0;j<k;j++)
      |                 ~^~
func.cpp:386:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  386 |       for(int i2=0;i2<n;i2++)
      |                    ~~^~
func.cpp:388:20: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
  388 |         if(memb(i2)==j){B(i,j) += D(i,i2);}
      |            ~~~~~~~~^~~
func.cpp:393:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  393 |   for(int i = 0; i<n;i++)
      |                  ~^~
func.cpp:395:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  395 |     for(int j = 0; j<k;j++)
      |                    ~^~
func.cpp:397:18: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
  397 |       if(memb(i) == j)
      |          ~~~~~~~~^~~~
func.cpp:418:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  418 |   for(int i = 0; i<n;i++)
      |                  ~^~
func.cpp: In function ‘double xie_beni(arma::mat, arma::mat, arma::mat, double, unsigned int, unsigned int)’:
func.cpp:496:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  496 |   for(int i=0; i<(k-1);i++)
      |                ~^~~~~~
func.cpp:498:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  498 |     for(int j=(i+1); j<k;j++)
      |                      ~^~
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c init.c -o init.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c memDeg.cpp -o memDeg.o
memDeg.cpp: In function ‘arma::mat memb_degree(arma::mat, double, unsigned int, unsigned int, unsigned int)’:
memDeg.cpp:24:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
   24 |   for(int i=0; i<n;i++)
      |                ~^~
memDeg.cpp:37:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
   37 |       for(int j=0; j<k;j++)
      |                    ~^~
memDeg.cpp: In function ‘arma::mat memb_degree_pf(arma::mat, double, unsigned int, unsigned int, unsigned int)’:
memDeg.cpp:68:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
   68 |   for(int i=0; i<n;i++)
      |                ~^~
memDeg.cpp: In function ‘arma::mat memb_degree_ent(arma::mat, double, unsigned int, unsigned int, unsigned int)’:
memDeg.cpp:123:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  123 |   for(int i=0; i<n;i++)
      |                ~^~
memDeg.cpp:136:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  136 |       for(int j=0; j<k;j++)
      |                    ~^~
memDeg.cpp: In function ‘arma::mat memb_degree_medoid(arma::mat, arma::uvec, double, unsigned int, unsigned int, unsigned int)’:
memDeg.cpp:172:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  172 |   for(int i=0; i<n;i++)
      |                ~^~
memDeg.cpp:186:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  186 |       for(int j=0; j<k;j++)
      |                    ~^~
memDeg.cpp:169:8: warning: variable ‘index_temp_med’ set but not used [-Wunused-but-set-variable]
  169 |   bool index_temp_med = true;
      |        ^~~~~~~~~~~~~~
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c partition_comp.cpp -o partition_comp.o
partition_comp.cpp: In function ‘Rcpp::List partition_comp(arma::mat, arma::mat, std::string)’:
partition_comp.cpp:40:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
   40 |   for(int j2 = 1; j2<N; j2++)
      |                   ~~^~
partition_comp.cpp:45:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
   45 |       for(int i = 0; i<k; i++)
      |                      ~^~
partition_comp.cpp:57:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
   57 |       for(int i1 = 0; i1<k; i1++)
      |                       ~~^~
partition_comp.cpp:59:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
   59 |         for(int i2 = 0; i2<k; i2++)
      |                         ~~^~
partition_comp.cpp:74:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
   74 |       for(int l = 0; l<v; l++)
      |                      ~^~
partition_comp.cpp:86:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
   86 |       for(int l1 = 0; l1<v; l1++)
      |                       ~~^~
partition_comp.cpp:88:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
   88 |         for(int l2 = 0; l2<v; l2++)
      |                         ~~^~
g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o fclust.so F.o FKM_rcpp.o RcppExports.o centroids.o distance.o func.o init.o memDeg.o partition_comp.o -llapack -L/home/hornik/tmp/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpqZ9iK9/R.INSTALL269a2d46b49b57/fclust/src'
installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-fclust/00new/fclust/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (fclust)

checking vegclust_2.0.3.tar.gz ...
checking EcotoneFinder_0.2.3.tar.gz ...
checking WeightedCluster_1.8-1.tar.gz ...
checking ecotraj_1.1.0.tar.gz ...
checking ppclust_1.1.0.1.tar.gz ...

Depends:
Package: vegclust
  Depends: R (>= 3.4.0)
  Imports: vegan

Timings:
           user system elapsed
vegclust 62.493  6.174  70.359

Results:
Check status summary:
                  OK
  Source packages  1
  Reverse depends  4

Check results summary:
vegclust ... OK
rdepends_EcotoneFinder ... OK
rdepends_ecotraj ... OK
rdepends_ppclust ... OK
rdepends_WeightedCluster ... OK

Check results changes:
Package: EcotoneFinder
Check: CRAN incoming feasibility
Old result: NOTE

Package: ppclust
Check: CRAN incoming feasibility
Old result: NOTE