* installing *source* package ‘vectra’ ... ** this is package ‘vectra’ version ‘0.5.0’ ** using staged installation configure: tdc sibling not found, using pre-vendored src/tdc/ ** libs using C compiler: ‘Debian clang version 21.1.8 (3+b1)’ clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c agg_ops.c -o agg_ops.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c array.c -o array.o array.c:169:13: warning: unused variable 'src_bytes' [-Wunused-variable] 169 | int64_t src_bytes = (src_off + n + 7) >> 3; | ^~~~~~~~~ 1 warning generated. clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c batch.c -o batch.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c block.c -o block.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c builder.c -o builder.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c coerce.c -o coerce.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c collect.c -o collect.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c concat.c -o concat.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c csv_reader.c -o csv_reader.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c csv_scan.c -o csv_scan.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c csv_write.c -o csv_write.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c error.c -o error.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c expr.c -o expr.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c expr_datetime.c -o expr_datetime.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c expr_string.c -o expr_string.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c filter.c -o filter.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c fuzzy_join.c -o fuzzy_join.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c group_agg.c -o group_agg.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c hash.c -o hash.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c join.c -o join.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c limit.c -o limit.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c optimize.c -o optimize.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c project.c -o project.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c r_bridge.c -o r_bridge.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c r_bridge_core.c -o r_bridge_core.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c r_bridge_index.c -o r_bridge_index.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c r_bridge_io.c -o r_bridge_io.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c r_bridge_nodes.c -o r_bridge_nodes.o r_bridge_nodes.c:362:14: warning: variable 'method' is used uninitialized whenever 'if' condition is false [-Wsometimes-uninitialized] 362 | else if (method_int == 2) method = FUZZY_JW; | ^~~~~~~~~~~~~~~ r_bridge_nodes.c:373:9: note: uninitialized use occurs here 373 | method, max_dist, n_threads, | ^~~~~~ r_bridge_nodes.c:362:10: note: remove the 'if' if its condition is always true 362 | else if (method_int == 2) method = FUZZY_JW; | ^~~~~~~~~~~~~~~~~~~~ ~ 363 | else vectra_error("fuzzy_join: unknown method: %d", method_int); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ r_bridge_nodes.c:359:5: note: variable 'method' is declared here 359 | FuzzyMethod method; | ^ 1 warning generated. clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c scalar_ops.c -o scalar_ops.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c scan.c -o scan.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c schema.c -o schema.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c sort.c -o sort.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c sql_scan.c -o sql_scan.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c sql_write.c -o sql_write.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c sqlite_format.c -o sqlite_format.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tiff_format.c -o tiff_format.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tiff_scan.c -o tiff_scan.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tiff_write.c -o tiff_write.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c topn.c -o topn.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c vtr1_tdc.c -o vtr1_tdc.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c vtr_append.c -o vtr_append.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c vtr_atomic_rename.c -o vtr_atomic_rename.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c vtr_codec_tdc.c -o vtr_codec_tdc.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c vtr_delete.c -o vtr_delete.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c vtr_diff.c -o vtr_diff.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c vtr_write.c -o vtr_write.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c vtri.c -o vtri.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c window.c -o window.o window.c:66:13: warning: function 'win_merge_sort_par' is not needed and will not be emitted [-Wunneeded-internal-declaration] 66 | static void win_merge_sort_par(int64_t *indices, int64_t *tmp, int64_t n, | ^~~~~~~~~~~~~~~~~~ 1 warning generated. clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/api/decode.c -o tdc/src/api/decode.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/api/decode_ex.c -o tdc/src/api/decode_ex.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/api/decode_impl.c -o tdc/src/api/decode_impl.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/api/decode_into.c -o tdc/src/api/decode_into.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/api/decode_varlen.c -o tdc/src/api/decode_varlen.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/api/encode.c -o tdc/src/api/encode.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/api/pushpull_decode.c -o tdc/src/api/pushpull_decode.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/api/pushpull_encode.c -o tdc/src/api/pushpull_encode.o tdc/src/api/pushpull_encode.c:66:14: warning: unused function 'pp_alloc' [-Wunused-function] 66 | static void *pp_alloc(tdc_pushpull_encoder *e, void *p, size_t sz) { | ^~~~~~~~ 1 warning generated. clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/api/stream_decode.c -o tdc/src/api/stream_decode.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/api/stream_encode.c -o tdc/src/api/stream_encode.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/core/arena.c -o tdc/src/core/arena.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/core/block.c -o tdc/src/core/block.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/core/decode_profile.c -o tdc/src/core/decode_profile.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/core/error.c -o tdc/src/core/error.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/core/registry.c -o tdc/src/core/registry.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/core/stream.c -o tdc/src/core/stream.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/entropy/deflate.c -o tdc/src/entropy/deflate.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/entropy/fse.c -o tdc/src/entropy/fse.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/entropy/huffman.c -o tdc/src/entropy/huffman.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/entropy/huffman4.c -o tdc/src/entropy/huffman4.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/entropy/lane.c -o tdc/src/entropy/lane.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/entropy/lz.c -o tdc/src/entropy/lz.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/entropy/lz_opt.c -o tdc/src/entropy/lz_opt.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/entropy/lz_streams.c -o tdc/src/entropy/lz_streams.o tdc/src/entropy/lz_streams.c:365:24: warning: unused function 'lzs_bits_read' [-Wunused-function] 365 | static inline uint32_t lzs_bits_read(const uint8_t *buf, uint32_t *bit_pos, | ^~~~~~~~~~~~~ tdc/src/entropy/lz_streams.c:533:13: warning: unused function 'lzs_shuffle_u32' [-Wunused-function] 533 | static void lzs_shuffle_u32(const uint32_t *src, uint32_t n, uint8_t *dst) { | ^~~~~~~~~~~~~~~ tdc/src/entropy/lz_streams.c:1741:24: warning: unused function 'lzs_br_read_fast' [-Wunused-function] 1741 | static inline uint32_t lzs_br_read_fast(lzs_br *br, uint32_t nb) { | ^~~~~~~~~~~~~~~~ tdc/src/entropy/lz_streams.c:2063:19: warning: unused function 'lzs_reconstruct_symbols' [-Wunused-function] 2063 | static tdc_status lzs_reconstruct_symbols(const uint8_t *ll_dec, | ^~~~~~~~~~~~~~~~~~~~~~~ 4 warnings generated. clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/entropy/mf_btree.c -o tdc/src/entropy/mf_btree.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/entropy/mf_hashchain.c -o tdc/src/entropy/mf_hashchain.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/entropy/none.c -o tdc/src/entropy/none.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/format/block_record.c -o tdc/src/format/block_record.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/format/header.c -o tdc/src/format/header.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/format/metadata.c -o tdc/src/format/metadata.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/format/rowgroup.c -o tdc/src/format/rowgroup.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/format/schema.c -o tdc/src/format/schema.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/format/stats.c -o tdc/src/format/stats.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/layout/tiling.c -o tdc/src/layout/tiling.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/layout/traverse.c -o tdc/src/layout/traverse.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/model/delta1d.c -o tdc/src/model/delta1d.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/model/delta2_1d.c -o tdc/src/model/delta2_1d.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/model/dict.c -o tdc/src/model/dict.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/model/dict_numeric.c -o tdc/src/model/dict_numeric.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/model/fpc1d.c -o tdc/src/model/fpc1d.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/model/plane2d.c -o tdc/src/model/plane2d.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/model/pred2d.c -o tdc/src/model/pred2d.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/model/pred3d.c -o tdc/src/model/pred3d.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/model/pred3d_float.c -o tdc/src/model/pred3d_float.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/model/quantize_pred2d.c -o tdc/src/model/quantize_pred2d.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/model/raw.c -o tdc/src/model/raw.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/model/sparse_zero_1d.c -o tdc/src/model/sparse_zero_1d.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/model/stack2d.c -o tdc/src/model/stack2d.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/symbols/residuals.c -o tdc/src/symbols/residuals.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/symbols/runs.c -o tdc/src/symbols/runs.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/transform/bitshuffle.c -o tdc/src/transform/bitshuffle.o tdc/src/transform/bitshuffle.c:190:13: warning: unused function 'bitshuffle_scatter' [-Wunused-function] 190 | static void bitshuffle_scatter(uint8_t *dst, const uint8_t *src, | ^~~~~~~~~~~~~~~~~~ tdc/src/transform/bitshuffle.c:219:13: warning: unused function 'bitshuffle_gather' [-Wunused-function] 219 | static void bitshuffle_gather(uint8_t *dst, const uint8_t *src, | ^~~~~~~~~~~~~~~~~ 2 warnings generated. clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/transform/quantize.c -o tdc/src/transform/quantize.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/transform/shuffle.c -o tdc/src/transform/shuffle.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/transform/zigzag.c -o tdc/src/transform/zigzag.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./tdc/include -fpic -g -O3 -Wall -pedantic -c miniz/miniz.c -o miniz/miniz.o miniz/miniz.c:3185:9: warning: Using fopen, ftello, fseeko, stat() etc. path for file I/O - this path may not support large files. [-W#pragma-messages] 3185 | #pragma message("Using fopen, ftello, fseeko, stat() etc. path for file I/O - this path may not support large files.") | ^ 1 warning generated. clang-21 -std=gnu23 -shared -L/home/hornik/tmp/R-d-clang-21/lib -Wl,-O1 -o vectra.so agg_ops.o array.o batch.o block.o builder.o coerce.o collect.o concat.o csv_reader.o csv_scan.o csv_write.o error.o expr.o expr_datetime.o expr_string.o filter.o fuzzy_join.o group_agg.o hash.o init.o join.o limit.o optimize.o project.o r_bridge.o r_bridge_core.o r_bridge_index.o r_bridge_io.o r_bridge_nodes.o scalar_ops.o scan.o schema.o sort.o sql_scan.o sql_write.o sqlite_format.o tiff_format.o tiff_scan.o tiff_write.o topn.o vtr1_tdc.o vtr_append.o vtr_atomic_rename.o vtr_codec_tdc.o vtr_delete.o vtr_diff.o vtr_write.o vtri.o window.o tdc/src/api/decode.o tdc/src/api/decode_ex.o tdc/src/api/decode_impl.o tdc/src/api/decode_into.o tdc/src/api/decode_varlen.o tdc/src/api/encode.o tdc/src/api/pushpull_decode.o tdc/src/api/pushpull_encode.o tdc/src/api/stream_decode.o tdc/src/api/stream_encode.o tdc/src/core/arena.o tdc/src/core/block.o tdc/src/core/decode_profile.o tdc/src/core/error.o tdc/src/core/registry.o tdc/src/core/stream.o tdc/src/entropy/deflate.o tdc/src/entropy/fse.o tdc/src/entropy/huffman.o tdc/src/entropy/huffman4.o tdc/src/entropy/lane.o tdc/src/entropy/lz.o tdc/src/entropy/lz_opt.o tdc/src/entropy/lz_streams.o tdc/src/entropy/mf_btree.o tdc/src/entropy/mf_hashchain.o tdc/src/entropy/none.o tdc/src/format/block_record.o tdc/src/format/header.o tdc/src/format/metadata.o tdc/src/format/rowgroup.o tdc/src/format/schema.o tdc/src/format/stats.o tdc/src/layout/tiling.o tdc/src/layout/traverse.o tdc/src/model/delta1d.o tdc/src/model/delta2_1d.o tdc/src/model/dict.o tdc/src/model/dict_numeric.o tdc/src/model/fpc1d.o tdc/src/model/plane2d.o tdc/src/model/pred2d.o tdc/src/model/pred3d.o tdc/src/model/pred3d_float.o tdc/src/model/quantize_pred2d.o tdc/src/model/raw.o tdc/src/model/sparse_zero_1d.o tdc/src/model/stack2d.o tdc/src/symbols/residuals.o tdc/src/symbols/runs.o tdc/src/transform/bitshuffle.o tdc/src/transform/quantize.o tdc/src/transform/shuffle.o tdc/src/transform/zigzag.o miniz/miniz.o -L/home/hornik/tmp/R-d-clang-21/lib -lR installing to /srv/hornik/tmp/CRAN_pretest/vectra.Rcheck/00LOCK-vectra/00new/vectra/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (vectra)