* installing *source* package ‘trtswitch’ ... ** this is package ‘trtswitch’ version ‘0.2.2’ ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.3.0-10) 14.3.0’ g++-14 -fsanitize=address,undefined,bounds-strict -fno-omit-frame-pointer -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_gcc-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-deprecated-declarations -Wno-stringop-truncation -c RcppExports.cpp -o RcppExports.o g++-14 -fsanitize=address,undefined,bounds-strict -fno-omit-frame-pointer -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_gcc-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-deprecated-declarations -Wno-stringop-truncation -c ipcw.cpp -o ipcw.o g++-14 -fsanitize=address,undefined,bounds-strict -fno-omit-frame-pointer -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_gcc-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-deprecated-declarations -Wno-stringop-truncation -c ipe.cpp -o ipe.o g++-14 -fsanitize=address,undefined,bounds-strict -fno-omit-frame-pointer -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_gcc-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-deprecated-declarations -Wno-stringop-truncation -c logistic_regression.cpp -o logistic_regression.o g++-14 -fsanitize=address,undefined,bounds-strict -fno-omit-frame-pointer -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_gcc-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-deprecated-declarations -Wno-stringop-truncation -c msm.cpp -o msm.o msm.cpp: In function ‘Rcpp::List msmcpp(Rcpp::DataFrame, std::string, const Rcpp::StringVector&, std::string, std::string, std::string, std::string, std::string, std::string, const Rcpp::StringVector&, const Rcpp::StringVector&, const Rcpp::StringVector&, bool, int, bool, bool, bool, double, bool, bool, bool, double, std::string, bool, int, int)’: msm.cpp:9:6: note: variable tracking size limit exceeded with ‘-fvar-tracking-assignments’, retrying without 9 | List msmcpp( | ^~~~~~ g++-14 -fsanitize=address,undefined,bounds-strict -fno-omit-frame-pointer -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_gcc-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-deprecated-declarations -Wno-stringop-truncation -c recensor_sim_rpsftm.cpp -o recensor_sim_rpsftm.o g++-14 -fsanitize=address,undefined,bounds-strict -fno-omit-frame-pointer -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_gcc-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-deprecated-declarations -Wno-stringop-truncation -c rpsftm.cpp -o rpsftm.o g++-14 -fsanitize=address,undefined,bounds-strict -fno-omit-frame-pointer -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_gcc-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-deprecated-declarations -Wno-stringop-truncation -c splines.cpp -o splines.o g++-14 -fsanitize=address,undefined,bounds-strict -fno-omit-frame-pointer -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_gcc-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-deprecated-declarations -Wno-stringop-truncation -c survival_analysis.cpp -o survival_analysis.o survival_analysis.cpp: In function ‘Rcpp::DataFrame lrtest(Rcpp::DataFrame, const Rcpp::StringVector&, const Rcpp::StringVector&, std::string, std::string, std::string, std::string, std::string, bool, double, double)’: survival_analysis.cpp:1846:42: warning: ‘neventwa’ may be used uninitialized [-Wmaybe-uninitialized] 1846 | u += w*(neventwa_1 - neventwa*(nrisk_1/nrisk)); | ~~~~~~~~^~~~~~~~~~~~~~~~ survival_analysis.cpp:1639:12: note: ‘neventwa’ was declared here 1639 | double neventwa, neventwa_1, neventwa_2; // adjusted weighted # events | ^~~~~~~~ survival_analysis.cpp:1846:32: warning: ‘neventwa_1’ may be used uninitialized [-Wmaybe-uninitialized] 1846 | u += w*(neventwa_1 - neventwa*(nrisk_1/nrisk)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ survival_analysis.cpp:1639:22: note: ‘neventwa_1’ was declared here 1639 | double neventwa, neventwa_1, neventwa_2; // adjusted weighted # events | ^~~~~~~~~~ g++-14 -fsanitize=address,undefined,bounds-strict -fno-omit-frame-pointer -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_gcc-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-deprecated-declarations -Wno-stringop-truncation -c tsegest.cpp -o tsegest.o tsegest.cpp: In function ‘Rcpp::List tsegestcpp(Rcpp::DataFrame, std::string, const Rcpp::StringVector&, std::string, std::string, std::string, std::string, std::string, std::string, std::string, std::string, std::string, const Rcpp::StringVector&, const Rcpp::StringVector&, bool, int, bool, bool, double, double, int, bool, bool, bool, bool, std::string, double, std::string, double, double, bool, int, int)’: tsegest.cpp:112:6: note: variable tracking size limit exceeded with ‘-fvar-tracking-assignments’, retrying without 112 | List tsegestcpp( | ^~~~~~~~~~ g++-14 -fsanitize=address,undefined,bounds-strict -fno-omit-frame-pointer -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_gcc-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-deprecated-declarations -Wno-stringop-truncation -c tsegestsim.cpp -o tsegestsim.o g++-14 -fsanitize=address,undefined,bounds-strict -fno-omit-frame-pointer -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_gcc-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-deprecated-declarations -Wno-stringop-truncation -c tsesimp.cpp -o tsesimp.o g++-14 -fsanitize=address,undefined,bounds-strict -fno-omit-frame-pointer -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_gcc-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-deprecated-declarations -Wno-stringop-truncation -c tssim.cpp -o tssim.o g++-14 -fsanitize=address,undefined,bounds-strict -fno-omit-frame-pointer -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_gcc-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-deprecated-declarations -Wno-stringop-truncation -c utilities.cpp -o utilities.o g++-14 -fsanitize=address,undefined,bounds-strict -fno-omit-frame-pointer -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-xtra/lib -Wl,-O1 -o trtswitch.so RcppExports.o ipcw.o ipe.o logistic_regression.o msm.o recensor_sim_rpsftm.o rpsftm.o splines.o survival_analysis.o tsegest.o tsegestsim.o tsesimp.o tssim.o utilities.o -L/home/hornik/tmp/R-d-gcc-xtra/lib -lR installing to /home/hornik/tmp/CRAN_special_gcc-san/trtswitch.Rcheck/00LOCK-trtswitch/00new/trtswitch/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (trtswitch)