Package check result: ERROR Check: re-building of vignette outputs, Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘ipcw.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/CRAN_special_clang-san/trtswitch.Rcheck/vign_test/trtswitch/vignettes/ipcw_files/figure-html/weights example 1-1.png 288x288 pixels, 3x8 bits/pixel, RGB Input IDAT size = 11396 bytes Input file size = 11486 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 9891 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 9891 Output IDAT size = 9891 bytes (1505 bytes decrease) Output file size = 9969 bytes (1517 bytes = 13.21% decrease) ** Processing: /home/hornik/tmp/CRAN_special_clang-san/trtswitch.Rcheck/vign_test/trtswitch/vignettes/ipcw_files/figure-html/weights example 1-2.png 288x288 pixels, 3x8 bits/pixel, RGB Input IDAT size = 10825 bytes Input file size = 10915 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 9553 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 9553 Output IDAT size = 9553 bytes (1272 bytes decrease) Output file size = 9631 bytes (1284 bytes = 11.76% decrease) ** Processing: /home/hornik/tmp/CRAN_special_clang-san/trtswitch.Rcheck/vign_test/trtswitch/vignettes/ipcw_files/figure-html/weights example 2-1.png 288x288 pixels, 3x8 bits/pixel, RGB Input IDAT size = 11059 bytes Input file size = 11149 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 9027 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 9027 Output IDAT size = 9027 bytes (2032 bytes decrease) Output file size = 9105 bytes (2044 bytes = 18.33% decrease) ** Processing: /home/hornik/tmp/CRAN_special_clang-san/trtswitch.Rcheck/vign_test/trtswitch/vignettes/ipcw_files/figure-html/weights example 2-2.png 288x288 pixels, 3x8 bits/pixel, RGB Input IDAT size = 11574 bytes Input file size = 11664 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 9636 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 9636 Output IDAT size = 9636 bytes (1938 bytes decrease) Output file size = 9714 bytes (1950 bytes = 16.72% decrease) --- finished re-building ‘ipcw.Rmd’ +-+ipcw.html ================================================================= ==1429470==ERROR: LeakSanitizer: detected memory leaks Direct leak of 6656 byte(s) in 26 object(s) allocated from: #0 0x56153aa7b1b3 in malloc (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0xc61b3) (BuildId: 71b7cc9351bcc02083f9df16c056d5fba06ed51c) #1 0x7f330add7c81 (/usr/lib/x86_64-linux-gnu/libfontconfig.so.1+0x24c81) (BuildId: 4b26d8a18d92f6f97cf8eccd56f114fb89e44039) Direct leak of 4352 byte(s) in 7 object(s) allocated from: #0 0x56153aa7b5d0 in realloc (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0xc65d0) (BuildId: 71b7cc9351bcc02083f9df16c056d5fba06ed51c) #1 0x7f330add7d28 (/usr/lib/x86_64-linux-gnu/libfontconfig.so.1+0x24d28) (BuildId: 4b26d8a18d92f6f97cf8eccd56f114fb89e44039) Indirect leak of 17280 byte(s) in 540 object(s) allocated from: #0 0x56153aa7b1b3 in malloc (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0xc61b3) (BuildId: 71b7cc9351bcc02083f9df16c056d5fba06ed51c) #1 0x7f330adc198f (/usr/lib/x86_64-linux-gnu/libfontconfig.so.1+0xe98f) (BuildId: 4b26d8a18d92f6f97cf8eccd56f114fb89e44039) Indirect leak of 7936 byte(s) in 664 object(s) allocated from: #0 0x56153aa62ebe in strdup (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0xadebe) (BuildId: 71b7cc9351bcc02083f9df16c056d5fba06ed51c) #1 0x7f330add74d7 in FcValueSave (/usr/lib/x86_64-linux-gnu/libfontconfig.so.1+0x244d7) (BuildId: 4b26d8a18d92f6f97cf8eccd56f114fb89e44039) Indirect leak of 6112 byte(s) in 191 object(s) allocated from: #0 0x56153aa7b39d in calloc (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0xc639d) (BuildId: 71b7cc9351bcc02083f9df16c056d5fba06ed51c) #1 0x7f330add8450 (/usr/lib/x86_64-linux-gnu/libfontconfig.so.1+0x25450) (BuildId: 4b26d8a18d92f6f97cf8eccd56f114fb89e44039) Indirect leak of 2688 byte(s) in 84 object(s) allocated from: #0 0x56153aa7b39d in calloc (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0xc639d) (BuildId: 71b7cc9351bcc02083f9df16c056d5fba06ed51c) #1 0x7f330add7862 (/usr/lib/x86_64-linux-gnu/libfontconfig.so.1+0x24862) (BuildId: 4b26d8a18d92f6f97cf8eccd56f114fb89e44039) Indirect leak of 576 byte(s) in 18 object(s) allocated from: #0 0x56153aa7b39d in calloc (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0xc639d) (BuildId: 71b7cc9351bcc02083f9df16c056d5fba06ed51c) #1 0x7f330add770f (/usr/lib/x86_64-linux-gnu/libfontconfig.so.1+0x2470f) (BuildId: 4b26d8a18d92f6f97cf8eccd56f114fb89e44039) Indirect leak of 192 byte(s) in 6 object(s) allocated from: #0 0x56153aa7b39d in calloc (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0xc639d) (BuildId: 71b7cc9351bcc02083f9df16c056d5fba06ed51c) #1 0x7f330add777f (/usr/lib/x86_64-linux-gnu/libfontconfig.so.1+0x2477f) (BuildId: 4b26d8a18d92f6f97cf8eccd56f114fb89e44039) Indirect leak of 144 byte(s) in 3 object(s) allocated from: #0 0x56153aa7b1b3 in malloc (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0xc61b3) (BuildId: 71b7cc9351bcc02083f9df16c056d5fba06ed51c) #1 0x7f330add0d2f in FcLangSetCopy (/usr/lib/x86_64-linux-gnu/libfontconfig.so.1+0x1dd2f) (BuildId: 4b26d8a18d92f6f97cf8eccd56f114fb89e44039) SUMMARY: AddressSanitizer: 45936 byte(s) leaked in 1539 allocation(s). --- re-building ‘ipe.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/CRAN_special_clang-san/trtswitch.Rcheck/vign_test/trtswitch/vignettes/ipe_files/figure-html/km-1.png 288x288 pixels, 8 bits/pixel, 254 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 4749 bytes Input file size = 5601 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4408 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4408 Output IDAT size = 4408 bytes (341 bytes decrease) Output file size = 4486 bytes (1115 bytes = 19.91% decrease) ** Processing: /home/hornik/tmp/CRAN_special_clang-san/trtswitch.Rcheck/vign_test/trtswitch/vignettes/ipe_files/figure-html/convergence issue-1.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 16251 bytes Input file size = 17121 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 15665 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 11864 zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 11754 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 11754 Output IDAT size = 11754 bytes (4497 bytes decrease) Output file size = 11832 bytes (5289 bytes = 30.89% decrease) --- finished re-building ‘ipe.Rmd’ +-+ipe.html ================================================================= ==1429625==ERROR: LeakSanitizer: detected memory leaks Direct leak of 6656 byte(s) in 26 object(s) allocated from: #0 0x55b811df51b3 in malloc (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0xc61b3) (BuildId: 71b7cc9351bcc02083f9df16c056d5fba06ed51c) #1 0x7f58ca5d7c81 (/usr/lib/x86_64-linux-gnu/libfontconfig.so.1+0x24c81) (BuildId: 4b26d8a18d92f6f97cf8eccd56f114fb89e44039) Direct leak of 5120 byte(s) in 8 object(s) allocated from: #0 0x55b811df55d0 in realloc (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0xc65d0) (BuildId: 71b7cc9351bcc02083f9df16c056d5fba06ed51c) #1 0x7f58ca5d7d28 (/usr/lib/x86_64-linux-gnu/libfontconfig.so.1+0x24d28) (BuildId: 4b26d8a18d92f6f97cf8eccd56f114fb89e44039) Indirect leak of 17280 byte(s) in 540 object(s) allocated from: #0 0x55b811df51b3 in malloc (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0xc61b3) (BuildId: 71b7cc9351bcc02083f9df16c056d5fba06ed51c) #1 0x7f58ca5c198f (/usr/lib/x86_64-linux-gnu/libfontconfig.so.1+0xe98f) (BuildId: 4b26d8a18d92f6f97cf8eccd56f114fb89e44039) Indirect leak of 8141 byte(s) in 679 object(s) allocated from: #0 0x55b811ddcebe in strdup (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0xadebe) (BuildId: 71b7cc9351bcc02083f9df16c056d5fba06ed51c) #1 0x7f58ca5d74d7 in FcValueSave (/usr/lib/x86_64-linux-gnu/libfontconfig.so.1+0x244d7) (BuildId: 4b26d8a18d92f6f97cf8eccd56f114fb89e44039) Indirect leak of 6400 byte(s) in 200 object(s) allocated from: #0 0x55b811df539d in calloc (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0xc639d) (BuildId: 71b7cc9351bcc02083f9df16c056d5fba06ed51c) #1 0x7f58ca5d8450 (/usr/lib/x86_64-linux-gnu/libfontconfig.so.1+0x25450) (BuildId: 4b26d8a18d92f6f97cf8eccd56f114fb89e44039) Indirect leak of 3584 byte(s) in 112 object(s) allocated from: #0 0x55b811df539d in calloc (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0xc639d) (BuildId: 71b7cc9351bcc02083f9df16c056d5fba06ed51c) #1 0x7f58ca5d7862 (/usr/lib/x86_64-linux-gnu/libfontconfig.so.1+0x24862) (BuildId: 4b26d8a18d92f6f97cf8eccd56f114fb89e44039) Indirect leak of 768 byte(s) in 24 object(s) allocated from: #0 0x55b811df539d in calloc (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0xc639d) (BuildId: 71b7cc9351bcc02083f9df16c056d5fba06ed51c) #1 0x7f58ca5d770f (/usr/lib/x86_64-linux-gnu/libfontconfig.so.1+0x2470f) (BuildId: 4b26d8a18d92f6f97cf8eccd56f114fb89e44039) Indirect leak of 256 byte(s) in 8 object(s) allocated from: #0 0x55b811df539d in calloc (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0xc639d) (BuildId: 71b7cc9351bcc02083f9df16c056d5fba06ed51c) #1 0x7f58ca5d777f (/usr/lib/x86_64-linux-gnu/libfontconfig.so.1+0x2477f) (BuildId: 4b26d8a18d92f6f97cf8eccd56f114fb89e44039) Indirect leak of 192 byte(s) in 4 object(s) allocated from: #0 0x55b811df51b3 in malloc (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0xc61b3) (BuildId: 71b7cc9351bcc02083f9df16c056d5fba06ed51c) #1 0x7f58ca5d0d2f in FcLangSetCopy (/usr/lib/x86_64-linux-gnu/libfontconfig.so.1+0x1dd2f) (BuildId: 4b26d8a18d92f6f97cf8eccd56f114fb89e44039) SUMMARY: AddressSanitizer: 48397 byte(s) leaked in 1601 allocation(s). --- re-building ‘rpsftm.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/CRAN_special_clang-san/trtswitch.Rcheck/vign_test/trtswitch/vignettes/rpsftm_files/figure-html/Z(psi)-1.png 288x288 pixels, 8 bits/pixel, 254 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 5357 bytes Input file size = 6209 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4764 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4764 Output IDAT size = 4764 bytes (593 bytes decrease) Output file size = 4842 bytes (1367 bytes = 22.02% decrease) ** Processing: /home/hornik/tmp/CRAN_special_clang-san/trtswitch.Rcheck/vign_test/trtswitch/vignettes/rpsftm_files/figure-html/km-1.png 288x288 pixels, 8 bits/pixel, 254 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 4743 bytes Input file size = 5595 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4417 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4417 Output IDAT size = 4417 bytes (326 bytes decrease) Output file size = 4495 bytes (1100 bytes = 19.66% decrease) --- finished re-building ‘rpsftm.Rmd’ +-+rpsftm.html ================================================================= ==1429766==ERROR: LeakSanitizer: detected memory leaks Direct leak of 6656 byte(s) in 26 object(s) allocated from: #0 0x55baed4db1b3 in malloc (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0xc61b3) (BuildId: 71b7cc9351bcc02083f9df16c056d5fba06ed51c) #1 0x7fd167fd7c81 (/usr/lib/x86_64-linux-gnu/libfontconfig.so.1+0x24c81) (BuildId: 4b26d8a18d92f6f97cf8eccd56f114fb89e44039) Direct leak of 5120 byte(s) in 8 object(s) allocated from: #0 0x55baed4db5d0 in realloc (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0xc65d0) (BuildId: 71b7cc9351bcc02083f9df16c056d5fba06ed51c) #1 0x7fd167fd7d28 (/usr/lib/x86_64-linux-gnu/libfontconfig.so.1+0x24d28) (BuildId: 4b26d8a18d92f6f97cf8eccd56f114fb89e44039) Indirect leak of 17280 byte(s) in 540 object(s) allocated from: #0 0x55baed4db1b3 in malloc (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0xc61b3) (BuildId: 71b7cc9351bcc02083f9df16c056d5fba06ed51c) #1 0x7fd167fc198f (/usr/lib/x86_64-linux-gnu/libfontconfig.so.1+0xe98f) (BuildId: 4b26d8a18d92f6f97cf8eccd56f114fb89e44039) Indirect leak of 8141 byte(s) in 679 object(s) allocated from: #0 0x55baed4c2ebe in strdup (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0xadebe) (BuildId: 71b7cc9351bcc02083f9df16c056d5fba06ed51c) #1 0x7fd167fd74d7 in FcValueSave (/usr/lib/x86_64-linux-gnu/libfontconfig.so.1+0x244d7) (BuildId: 4b26d8a18d92f6f97cf8eccd56f114fb89e44039) Indirect leak of 6400 byte(s) in 200 object(s) allocated from: #0 0x55baed4db39d in calloc (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0xc639d) (BuildId: 71b7cc9351bcc02083f9df16c056d5fba06ed51c) #1 0x7fd167fd8450 (/usr/lib/x86_64-linux-gnu/libfontconfig.so.1+0x25450) (BuildId: 4b26d8a18d92f6f97cf8eccd56f114fb89e44039) Indirect leak of 3584 byte(s) in 112 object(s) allocated from: #0 0x55baed4db39d in calloc (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0xc639d) (BuildId: 71b7cc9351bcc02083f9df16c056d5fba06ed51c) #1 0x7fd167fd7862 (/usr/lib/x86_64-linux-gnu/libfontconfig.so.1+0x24862) (BuildId: 4b26d8a18d92f6f97cf8eccd56f114fb89e44039) Indirect leak of 768 byte(s) in 24 object(s) allocated from: #0 0x55baed4db39d in calloc (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0xc639d) (BuildId: 71b7cc9351bcc02083f9df16c056d5fba06ed51c) #1 0x7fd167fd770f (/usr/lib/x86_64-linux-gnu/libfontconfig.so.1+0x2470f) (BuildId: 4b26d8a18d92f6f97cf8eccd56f114fb89e44039) Indirect leak of 256 byte(s) in 8 object(s) allocated from: #0 0x55baed4db39d in calloc (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0xc639d) (BuildId: 71b7cc9351bcc02083f9df16c056d5fba06ed51c) #1 0x7fd167fd777f (/usr/lib/x86_64-linux-gnu/libfontconfig.so.1+0x2477f) (BuildId: 4b26d8a18d92f6f97cf8eccd56f114fb89e44039) Indirect leak of 192 byte(s) in 4 object(s) allocated from: #0 0x55baed4db1b3 in malloc (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0xc61b3) (BuildId: 71b7cc9351bcc02083f9df16c056d5fba06ed51c) #1 0x7fd167fd0d2f in FcLangSetCopy (/usr/lib/x86_64-linux-gnu/libfontconfig.so.1+0x1dd2f) (BuildId: 4b26d8a18d92f6f97cf8eccd56f114fb89e44039) SUMMARY: AddressSanitizer: 48397 byte(s) leaked in 1601 allocation(s). --- re-building ‘tsegest.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/CRAN_special_clang-san/trtswitch.Rcheck/vign_test/trtswitch/vignettes/tsegest_files/figure-html/km-1.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 4659 bytes Input file size = 5517 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4256 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4226 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4226 Output IDAT size = 4226 bytes (433 bytes decrease) Output file size = 4304 bytes (1213 bytes = 21.99% decrease) ** Processing: /home/hornik/tmp/CRAN_special_clang-san/trtswitch.Rcheck/vign_test/trtswitch/vignettes/tsegest_files/figure-html/Z(psi)-1.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 5933 bytes Input file size = 6791 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 5349 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 5349 Output IDAT size = 5349 bytes (584 bytes decrease) Output file size = 5427 bytes (1364 bytes = 20.09% decrease) --- finished re-building ‘tsegest.Rmd’ +-+tsegest.html ================================================================= ==1429888==ERROR: LeakSanitizer: detected memory leaks Direct leak of 7680 byte(s) in 12 object(s) allocated from: #0 0x55b3e7ff95d0 in realloc (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0xc65d0) (BuildId: 71b7cc9351bcc02083f9df16c056d5fba06ed51c) #1 0x7f61fcbd7d28 (/usr/lib/x86_64-linux-gnu/libfontconfig.so.1+0x24d28) (BuildId: 4b26d8a18d92f6f97cf8eccd56f114fb89e44039) Direct leak of 6656 byte(s) in 26 object(s) allocated from: #0 0x55b3e7ff91b3 in malloc (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0xc61b3) (BuildId: 71b7cc9351bcc02083f9df16c056d5fba06ed51c) #1 0x7f61fcbd7c81 (/usr/lib/x86_64-linux-gnu/libfontconfig.so.1+0x24c81) (BuildId: 4b26d8a18d92f6f97cf8eccd56f114fb89e44039) Indirect leak of 25920 byte(s) in 810 object(s) allocated from: #0 0x55b3e7ff91b3 in malloc (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0xc61b3) (BuildId: 71b7cc9351bcc02083f9df16c056d5fba06ed51c) #1 0x7f61fcbc198f (/usr/lib/x86_64-linux-gnu/libfontconfig.so.1+0xe98f) (BuildId: 4b26d8a18d92f6f97cf8eccd56f114fb89e44039) Indirect leak of 11982 byte(s) in 994 object(s) allocated from: #0 0x55b3e7fe0ebe in strdup (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0xadebe) (BuildId: 71b7cc9351bcc02083f9df16c056d5fba06ed51c) #1 0x7f61fcbd74d7 in FcValueSave (/usr/lib/x86_64-linux-gnu/libfontconfig.so.1+0x244d7) (BuildId: 4b26d8a18d92f6f97cf8eccd56f114fb89e44039) Indirect leak of 8768 byte(s) in 274 object(s) allocated from: #0 0x55b3e7ff939d in calloc (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0xc639d) (BuildId: 71b7cc9351bcc02083f9df16c056d5fba06ed51c) #1 0x7f61fcbd8450 (/usr/lib/x86_64-linux-gnu/libfontconfig.so.1+0x25450) (BuildId: 4b26d8a18d92f6f97cf8eccd56f114fb89e44039) Indirect leak of 5376 byte(s) in 168 object(s) allocated from: #0 0x55b3e7ff939d in calloc (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0xc639d) (BuildId: 71b7cc9351bcc02083f9df16c056d5fba06ed51c) #1 0x7f61fcbd7862 (/usr/lib/x86_64-linux-gnu/libfontconfig.so.1+0x24862) (BuildId: 4b26d8a18d92f6f97cf8eccd56f114fb89e44039) Indirect leak of 1152 byte(s) in 36 object(s) allocated from: #0 0x55b3e7ff939d in calloc (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0xc639d) (BuildId: 71b7cc9351bcc02083f9df16c056d5fba06ed51c) #1 0x7f61fcbd770f (/usr/lib/x86_64-linux-gnu/libfontconfig.so.1+0x2470f) (BuildId: 4b26d8a18d92f6f97cf8eccd56f114fb89e44039) Indirect leak of 384 byte(s) in 12 object(s) allocated from: #0 0x55b3e7ff939d in calloc (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0xc639d) (BuildId: 71b7cc9351bcc02083f9df16c056d5fba06ed51c) #1 0x7f61fcbd777f (/usr/lib/x86_64-linux-gnu/libfontconfig.so.1+0x2477f) (BuildId: 4b26d8a18d92f6f97cf8eccd56f114fb89e44039) Indirect leak of 288 byte(s) in 6 object(s) allocated from: #0 0x55b3e7ff91b3 in malloc (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0xc61b3) (BuildId: 71b7cc9351bcc02083f9df16c056d5fba06ed51c) #1 0x7f61fcbd0d2f in FcLangSetCopy (/usr/lib/x86_64-linux-gnu/libfontconfig.so.1+0x1dd2f) (BuildId: 4b26d8a18d92f6f97cf8eccd56f114fb89e44039) SUMMARY: AddressSanitizer: 68206 byte(s) leaked in 2338 allocation(s). --- re-building ‘tsesimp.Rmd’ using rmarkdown --- finished re-building ‘tsesimp.Rmd’ SUMMARY: processing the following files failed: ‘ipcw.Rmd’ ‘ipe.Rmd’ ‘rpsftm.Rmd’ ‘tsegest.Rmd’ Error: Vignette re-building failed. Execution halted Post-processing issues found: File: tests/testthat.Rout /home/hornik/src/R/src/main/dotcode.c:1978:2: runtime error: call to function coxph_wtest through pointer to incorrect function type 'void (*)(void *, void *, void *, void *, void *, void *)' /home/hornik/src/R/src/main/dotcode.c:1994:2: runtime error: call to function agsurv5 through pointer to incorrect function type 'void (*)(void *, void *, void *, void *, void *, void *, void *, void *, void *, void *)' /home/hornik/src/R/src/main/dotcode.c:2008:2: runtime error: call to function survdiff2 through pointer to incorrect function type 'void (*)(void *, void *, void *, void *, void *, void *, void *, void *, void *, void *, void *, void *, void *)' /home/hornik/src/R/src/main/dotcode.c:1986:2: runtime error: call to function coxmart through pointer to incorrect function type 'void (*)(void *, void *, void *, void *, void *, void *, void *, void *)' File: build_vignettes.log SUMMARY: AddressSanitizer: 45936 byte(s) leaked in 1539 allocation(s). SUMMARY: AddressSanitizer: 48397 byte(s) leaked in 1601 allocation(s). SUMMARY: AddressSanitizer: 48397 byte(s) leaked in 1601 allocation(s). SUMMARY: AddressSanitizer: 68206 byte(s) leaked in 2338 allocation(s). File: 00check.log SUMMARY: AddressSanitizer: 45936 byte(s) leaked in 1539 allocation(s). SUMMARY: AddressSanitizer: 48397 byte(s) leaked in 1601 allocation(s). SUMMARY: AddressSanitizer: 48397 byte(s) leaked in 1601 allocation(s). SUMMARY: AddressSanitizer: 68206 byte(s) leaked in 2338 allocation(s).