context("root_imbalance") test_that("usage", { set.seed(42) focal_tree <- ape::rphylo(n = 64, birth = 1, death = 0) ltab <- treestats::phylo_to_l(focal_tree) testthat::expect_equal(treestats::root_imbalance(focal_tree), treestats::root_imbalance(ltab)) bal_tree <- treestats::create_fully_balanced_tree(focal_tree) a1 <- treestats::root_imbalance(bal_tree) testthat::expect_equal(a1, 0.5) a2 <- treestats::root_imbalance(treestats::phylo_to_l(bal_tree)) testthat::expect_equal(a2, 0.5) unbal_tree <- treestats::create_fully_unbalanced_tree(focal_tree) a1 <- treestats::root_imbalance(unbal_tree) testthat::expect_equal(a1, 63 / 64) a2 <- treestats::root_imbalance(treestats::phylo_to_l(unbal_tree)) testthat::expect_equal(a2, 63 / 64) # with extinct species: focal_tree <- ape::rphylo(n = 100, birth = 1, death = 0.2, fossils = TRUE) ltab <- treestats::phylo_to_l(focal_tree) testthat::expect_equal(treestats::root_imbalance(focal_tree), treestats::root_imbalance(ltab)) }) test_that("wrong_object", { testthat::expect_error( treestats::root_imbalance(10), "input object has to be phylo or ltable" ) testthat::expect_error( treestats::root_imbalance(list()), "input object has to be phylo or ltable" ) })