library("MASS") library("tram") ### Windows diffs... options(digits = 3) tol <- .Machine$double.eps^(1/4) cmp <- function(x, y) stopifnot(isTRUE(all.equal(x, y, tolerance = tol))) (house.plr <- polr(Sat ~ Infl + Type + Cont, weights = Freq, data = housing)) summary(house.plr) (house.plr2 <- Polr(Sat ~ Infl + Type + Cont, weights = Freq, data = housing)) summary(house.plr2) cmp(coef(house.plr), coef(house.plr2)) ll <- logLik(house.plr) attr(ll, "nobs") <- NULL cmp(ll, logLik(house.plr2)) if (require("TH.data")) { ### blood loss data load(system.file("rda", "bloodloss.rda", package = "TH.data")) sMBL <- sort(unique(blood$MBL)) blood$MBLc <- cut(blood$MBL, breaks = c(-Inf, sMBL), ordered_result = TRUE) op <- mltoptim()[c("auglag", "nlminb")] m <- lapply(1:length(op), function(i) Polr(MBLc ~ 1, data = blood, method = "probit", optim = op[i]) ) stopifnot(all(diff(sapply(m, logLik)) < 1e-5)) m <- lapply(1:length(op), function(i) Polr(MBLc ~ IOL + DAUER.ap + FET.GEW, data = blood, method = "probit", optim = op[i]) ) stopifnot(all(diff(sapply(m, logLik)) < 1e-5)) }