test_that("models can be printed", { expect_error( capture.output(print.tna(mock_tna)), NA ) expect_error( capture.output(print.tna(mock_tna, generic = TRUE)), NA ) }) test_that("model summary can be printed", { summ <- summary(mock_tna) expect_error( capture.output(print.summary.tna(summ)), NA ) }) test_that("bootstrap results can be printed", { model <- tna(mock_sequence) boot <- bootstrap(model, iter = 20) expect_error( capture.output(print.tna_bootstrap(boot)), NA ) }) test_that("bootstrap summary can be printed", { model <- tna(mock_sequence) boot <- bootstrap(model, iter = 20) summ <- summary.tna_bootstrap(boot) expect_error( capture.output(print.summary.tna_bootstrap(summ)), NA ) }) test_that("centralities can be printed", { cm <- centralities(mock_tna) expect_error( capture.output(print.tna_centralities(cm)), NA ) }) test_that("cliques can be printed", { cliq <- cliques(mock_tna, size = 2) expect_error( capture.output(print.tna_cliques(cliq)), NA ) }) test_that("zero clique case is considered", { cliq <- cliques(mock_tna, size = 2, threshold = 0.5) expect_output( print.tna_cliques(cliq), "No 2-cliques were found in the network\\." ) }) test_that("communities can be printed", { comm <- communities(mock_tna) expect_error( capture.output(print.tna_communities(comm)), NA ) }) test_that("centrality stability coefficients can be printed", { model <- tna(mock_sequence) out <- estimate_cs(model, drop_prop = seq(0.3, 0.9, by = 0.2), iter = 10) expect_error( capture.output(print.tna_stability(out)), NA ) }) test_that("permutation test results can be printed", { model_x <- tna(group_regulation[1:100, ]) model_y <- tna(group_regulation[1001:1200, ]) perm <- permutation_test( model_x, model_y, measures = "InStrength", iter = 20 ) expect_error( capture.output(print.tna_permutation(perm)), NA ) }) test_that("group model can be printed", { expect_error( capture.output(print.group_tna(mmm_model)), NA ) }) test_that("group model summary can be printed", { summ <- summary(mmm_model) expect_error( capture.output(print.summary.group_tna(summ)), NA ) }) test_that("bootstrap results can be printed for clusters", { boot <- bootstrap(mmm_model, iter = 10) expect_error( capture.output(print.group_tna_bootstrap(boot)), NA ) }) test_that("bootstrap summary can be printed for clusters", { boot <- bootstrap(mmm_model, iter = 10) summ <- summary.group_tna_bootstrap(boot) expect_error( capture.output(print.summary.group_tna_bootstrap(summ)), NA ) }) test_that("centralities can be printed for clusters", { cm <- centralities(mmm_model) expect_error( capture.output(print.group_tna_centralities(cm)), NA ) }) test_that("cliques can be printed for clusters", { cliq <- cliques(mmm_model, size = 2) expect_error( capture.output(print.group_tna_cliques(cliq)), NA ) }) test_that("communities can be printed", { comm <- communities(mmm_model) expect_error( capture.output(print.group_tna_communities(comm)), NA ) }) test_that("centrality stability coefficients can be printed for clusters", { out <- estimate_cs(mmm_model, drop_prop = seq(0.3, 0.9, by = 0.2), iter = 10) expect_error( capture.output(print.group_tna_stability(out)), NA ) })