R version 4.6.0 alpha (2026-04-01 r89771 ucrt)
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Platform: x86_64-w64-mingw32/x64

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> library(testthat)
> library(tlsR)
> 
> test_check("tlsR")
Sample 'ToySample': 1 TLS detected.
Sample 'ToySample': 1 TLS detected.
Sample 'ToySample': 1 TLS detected.
Sample 'ToySample': 1 TLS detected.
Sample 'ToySample': 1 TLS detected.
Sample 'ToySample': 1 TLS detected.
Sample 'ToySample': B-cell clusters found but none met T-cell proximity threshold. Consider lowering `min_T_cells_nearby` or increasing `max_distance_T`.
Sample 'ToySample': 1 TLS detected.
detect_tic: 3 T-cell cluster(s) detected in 'ToySample'.
Sample 'ToySample': 1 TLS detected.
detect_tic: 3 T-cell cluster(s) detected in 'ToySample'.
Sample 'ToySample': 1 TLS detected.
detect_tic: 3 T-cell cluster(s) detected in 'ToySample'.
Sample 'ToySample': 1 TLS detected.
Sample 'ToySample': 1 TLS detected.
Sample 'ToySample': 1 TLS detected.
detect_tic: 3 T-cell cluster(s) detected in 'ToySample'.
Sample 'ToySample': 1 TLS detected.
scan_clustering: 1 significant window(s) found in 'ToySample'.
scan_clustering: 1 significant window(s) found in 'ToySample'.
Sample 'ToySample': 1 TLS detected.
Sample 'ToySample': 1 TLS detected.
Sample 'ToySample': 1 TLS detected.
Sample 'ToySample': 1 TLS detected.
Sample 'ToySample': 1 TLS detected.
detect_tic: 3 T-cell cluster(s) detected in 'ToySample'.
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 35 ]
> 
> proc.time()
   user  system elapsed 
   2.43    0.37    2.82