local({ owd <- getwd() if (is.null(owd)) { message("cannot 'chdir' as current directory is unknown") return(invisible()) } else on.exit(setwd(owd), add = TRUE) ## test for 3 specific cases of sourcing ## * sourcing a file by specifying its basename ## * sourcing a file by specifying its absolute path ## * sourcing a file by specifying one of its relative paths abs_path_R <- tempfile("test", fileext = ".R") on.exit(unlink(abs_path_R), add = TRUE) this.path:::.writeCode({ n <- this.path:::.getframenumber() if (is.na(n) || n < 1L) stop("invalid traceback") sym <- ".this.path::document.context" frame <- sys.frame(n) if (!exists(sym, envir = frame, inherits = FALSE)) sym <- ".this.path::document.contexts" stopifnot(bindingIsLocked(sym, frame)) cat("\n> getwd()\n") print(getwd()) cat("\n> ", paste(deparse(call("dynGet", sym)), collapse = "\n+ "), "\n", sep = "") print(frame[[sym]]) cat("\n> this.path::sys.path(original = TRUE)\n") print(this.path::sys.path(original = TRUE)) cat("\n> this.path::sys.path(for.msg = TRUE)\n") print(this.path::sys.path(for.msg = TRUE)) cat("\n> sys.path(verbose = TRUE)\n") stopifnot(identical( print(this.path::sys.path(verbose = TRUE)), getOption("this.path::sys.path() expectation") )) cat("\n> this.path::sys.path(original = TRUE)\n") print(this.path::sys.path(original = TRUE)) cat("\n> this.path::sys.path(for.msg = TRUE)\n") print(this.path::sys.path(for.msg = TRUE)) }, file = abs_path_R) abs_path_R <- normalizePath(abs_path_R, "/", TRUE) abs_path_dir <- normalizePath(R.home(), "/", TRUE) basename_R <- this.path::basename2(abs_path_R) basename_dir <- this.path::dirname2(abs_path_R) rel_path_and_dir <- function(file) { x <- this.path::path.split.1(file) n <- length(x) if (n < 3L) { c(this.path::dirname2(file), this.path::basename2(file)) } else { i <- n < seq_len(n) + max(2L, n%/%2L) c(this.path::path.unsplit(x[!i]), this.path::path.unsplit(x[i])) } } tmp <- rel_path_and_dir(abs_path_R) rel_path_dir <- tmp[[1L]] rel_path_R <- tmp[[2L]] rm(tmp) ## for 'source' and 'debugSource' specifically, ## try sourcing a file URL basename_R_URL <- this.path:::.as_file_URL(basename_R) rel_path_R_URL <- this.path:::.as_file_URL(rel_path_R) abs_path_R_URL <- this.path:::.as_file_URL(abs_path_R) fun <- function(expr, envir = parent.frame(), bquote.envir = envir, eval.envir = envir) { if (!is.environment(envir)) stop("not an environment", domain = "R") expr <- call("bquote", substitute(expr), as.symbol("bquote.envir")) expr <- eval(expr) dep <- deparse(expr) cat("\n\n\n\n\n\n\n\n\n\n") cat("\n> getwd()\n") print(getwd()) cat("\n> ") cat(dep, sep = "\n+ ") eval(expr, eval.envir) } oopt <- options(`this.path::sys.path() expectation` = normalizePath(abs_path_R, "/", TRUE)) on.exit(options(oopt), add = TRUE) ## try using source in all possible manners setwd(basename_dir) fun(source(.(basename_R) , local = TRUE, chdir = FALSE)) ## from a basename without changing directory fun(source(.(basename_R) , local = TRUE, chdir = TRUE )) ## from a basename with changing directory (shouldn't do anything) fun(source(.(basename_R_URL) , local = TRUE)) ## from a basename file URL fun(source(print(conn <- file(.(basename_R), "r")), local = TRUE)) ; close(conn) ## from a basename connection setwd(rel_path_dir) fun(source(.(rel_path_R) , local = TRUE, chdir = FALSE)) ## from a relative path without changing directory fun(source(.(rel_path_R) , local = TRUE, chdir = TRUE )) ## from a relative path with changing directory fun(source(.(rel_path_R_URL) , local = TRUE)) ## from a relative path file URL fun(source(print(conn <- file(.(rel_path_R), "r")), local = TRUE)) ; close(conn) ## from a relative path connection setwd(abs_path_dir) fun(source(.(abs_path_R) , local = TRUE, chdir = FALSE)) ## from an absolute path without changing directory fun(source(.(abs_path_R) , local = TRUE, chdir = TRUE )) ## from an absolute path with changing directory fun(source(.(abs_path_R_URL) , local = TRUE)) ## from a absolute path file URL fun(source(print(conn <- file(.(abs_path_R), "r")), local = TRUE)) ; close(conn) ## from an absolute path connection ## 'sys.source' cannot handle file URLs nor connections setwd(basename_dir) fun(sys.source(.(basename_R), envir = environment(), chdir = FALSE)) fun(sys.source(.(basename_R), envir = environment(), chdir = TRUE )) setwd(rel_path_dir) fun(sys.source(.(rel_path_R), envir = environment(), chdir = FALSE)) fun(sys.source(.(rel_path_R), envir = environment(), chdir = TRUE )) setwd(abs_path_dir) fun(sys.source(.(abs_path_R), envir = environment(), chdir = FALSE)) fun(sys.source(.(abs_path_R), envir = environment(), chdir = TRUE )) ## 'debugSource' cannot handle connections if (.Platform$GUI == "RStudio") { debugSource <- get("debugSource", "tools:rstudio", inherits = FALSE) setwd(basename_dir) fun(debugSource(.(basename_R) )) fun(debugSource(.(basename_R_URL))) setwd(rel_path_dir) fun(debugSource(.(rel_path_R) )) fun(debugSource(.(rel_path_R_URL))) setwd(abs_path_dir) fun(debugSource(.(abs_path_R) )) fun(debugSource(.(abs_path_R_URL))) } ## 'testthat::source_file' cannot handle file URLs nor connections if (requireNamespace("testthat", quietly = TRUE)) { setwd(basename_dir) fun(testthat::source_file(.(basename_R), env = environment(), chdir = FALSE, wrap = FALSE)) fun(testthat::source_file(.(basename_R), env = environment(), chdir = FALSE, wrap = TRUE )) fun(testthat::source_file(.(basename_R), env = environment(), chdir = TRUE , wrap = FALSE)) fun(testthat::source_file(.(basename_R), env = environment(), chdir = TRUE , wrap = TRUE )) setwd(rel_path_dir) fun(testthat::source_file(.(rel_path_R), env = environment(), chdir = FALSE, wrap = FALSE)) fun(testthat::source_file(.(rel_path_R), env = environment(), chdir = FALSE, wrap = TRUE )) fun(testthat::source_file(.(rel_path_R), env = environment(), chdir = TRUE , wrap = FALSE)) fun(testthat::source_file(.(rel_path_R), env = environment(), chdir = TRUE , wrap = TRUE )) setwd(abs_path_dir) fun(testthat::source_file(.(abs_path_R), env = environment(), chdir = FALSE, wrap = FALSE)) fun(testthat::source_file(.(abs_path_R), env = environment(), chdir = FALSE, wrap = TRUE )) fun(testthat::source_file(.(abs_path_R), env = environment(), chdir = TRUE , wrap = FALSE)) fun(testthat::source_file(.(abs_path_R), env = environment(), chdir = TRUE , wrap = TRUE )) } ## 'knitr::knit' cannot handle file URLs if (requireNamespace("knitr", quietly = TRUE)) { basename_Rmd <- basename_R; this.path::ext(basename_Rmd) <- ".Rmd" rel_path_Rmd <- rel_path_R; this.path::ext(rel_path_Rmd) <- ".Rmd" abs_path_Rmd <- abs_path_R; this.path::ext(abs_path_Rmd) <- ".Rmd" on.exit(unlink(abs_path_Rmd), add = TRUE) writeLines(c( "```{r}", ## remove expressions starting with 'cat' { exprs <- parse(abs_path_R) exprs <- exprs[!vapply(exprs, function(expr) { is.call(expr) && identical(expr[[1L]], as.symbol("cat")) }, NA, USE.NAMES = FALSE)] this.path:::.writeCode(exprs, NULL) }, "```" ), abs_path_Rmd) options(`this.path::sys.path() expectation` = normalizePath(abs_path_Rmd, "/", TRUE)) setwd(basename_dir) fun(knitr::knit(.(basename_Rmd) , output = stdout(), quiet = TRUE)) fun(knitr::knit(print(conn <- file(.(basename_Rmd))), output = stdout(), quiet = TRUE)); close(conn) setwd(rel_path_dir) fun(knitr::knit(.(rel_path_Rmd) , output = stdout(), quiet = TRUE)) fun(knitr::knit(print(conn <- file(.(rel_path_Rmd))), output = stdout(), quiet = TRUE)); close(conn) setwd(abs_path_dir) fun(knitr::knit(.(abs_path_Rmd) , output = stdout(), quiet = TRUE)) fun(knitr::knit(print(conn <- file(.(abs_path_Rmd))), output = stdout(), quiet = TRUE)); close(conn) } ## 'compiler::loadcmp' cannot handle file URLs nor connections if (requireNamespace("compiler", quietly = TRUE)) { basename_Rc <- basename_R; this.path::ext(basename_Rc) <- ".Rc" rel_path_Rc <- rel_path_R; this.path::ext(rel_path_Rc) <- ".Rc" abs_path_Rc <- abs_path_R; this.path::ext(abs_path_Rc) <- ".Rc" on.exit(unlink(abs_path_Rc), add = TRUE) compiler::cmpfile(abs_path_R, abs_path_Rc) options(`this.path::sys.path() expectation` = normalizePath(abs_path_Rc, "/", TRUE)) setwd(basename_dir) fun(compiler::loadcmp(.(basename_Rc), envir = environment(), chdir = FALSE)) fun(compiler::loadcmp(.(basename_Rc), envir = environment(), chdir = TRUE )) setwd(rel_path_dir) fun(compiler::loadcmp(.(rel_path_Rc), envir = environment(), chdir = FALSE)) fun(compiler::loadcmp(.(rel_path_Rc), envir = environment(), chdir = TRUE )) setwd(abs_path_dir) fun(compiler::loadcmp(.(abs_path_Rc), envir = environment(), chdir = FALSE)) fun(compiler::loadcmp(.(abs_path_Rc), envir = environment(), chdir = TRUE )) } ## 'box::use' cannot handle file URLs nor connections nor absolute paths if (requireNamespace("box", quietly = TRUE)) { options(`this.path::sys.path() expectation` = normalizePath(abs_path_R, "/", TRUE)) setwd(basename_dir); box::set_script_path(this.path::path.join(basename_dir, ".")) fun(box::use(module = ./.(as.symbol(sub("\\.R$", "", basename_R))))); box::unload(module) if (!this.path:::.is_abs_path(rel_path_R)) { tmp.fun <- function(x) { n <- length(x) if (n > 1L) call("/", tmp.fun(x[-n]), as.symbol(x[[n]])) else as.symbol(x[[1L]]) } tmp <- tmp.fun(c(".", this.path::path.split.1(sub("\\.R$", "", rel_path_R)))) setwd(rel_path_dir); box::set_script_path(this.path::path.join(rel_path_dir, ".")) fun(box::use(module = .(tmp))); box::unload(module) rm(tmp, tmp.fun) } } ## 'shiny::runApp' if (requireNamespace("shiny", quietly = TRUE)) { shinytmp <- tempfile("shinytmp", tmpdir = basename_dir) on.exit(unlink(shinytmp, recursive = TRUE, force = TRUE), add = TRUE) dir.create(shinytmp) file <- this.path::path.join(shinytmp, "app.R") writeLines(c( readLines(abs_path_R), "stop(structure(list(message = \"\", call = NULL), class = c(\"this_path_tests_R_catch_this_error\", \"error\", \"condition\")))" ), file) options(`this.path::sys.path() expectation` = normalizePath(file, "/", TRUE)) rm(file) abs_path_app_R <- normalizePath(shinytmp, "/", TRUE) abs_path_app_dir <- abs_path_dir basename_app_R <- "." basename_app_dir <- abs_path_app_R tmp <- rel_path_and_dir(abs_path_app_R) rel_path_app_dir <- tmp[[1L]] rel_path_app_R <- tmp[[2L]] rm(tmp) setwd(basename_app_dir) this.path::tryCatch3({ fun(shiny::runApp(.(basename_app_R))) }, this_path_tests_R_catch_this_error = ) setwd(rel_path_app_dir) this.path::tryCatch3({ fun(shiny::runApp(.(rel_path_app_R))) }, this_path_tests_R_catch_this_error = ) setwd(abs_path_app_dir) this.path::tryCatch3({ fun(shiny::runApp(.(abs_path_app_R))) }, this_path_tests_R_catch_this_error = ) } ## 'plumber::plumb' cannot handle file URLs nor connections if (requireNamespace("plumber", quietly = TRUE)) { options(`this.path::sys.path() expectation` = normalizePath(abs_path_R, "/", TRUE)) setwd(basename_dir) fun(plumber::plumb(.(basename_R))) setwd(rel_path_dir) fun(plumber::plumb(.(rel_path_R))) setwd(abs_path_dir) fun(plumber::plumb(.(abs_path_R))) entrypoint_R <- this.path::path.join(basename_dir, "entrypoint.R") on.exit(unlink(entrypoint_R), add = TRUE) writeLines(c( readLines(abs_path_R), "plumber::Plumber$new()" ), entrypoint_R) options(`this.path::sys.path() expectation` = normalizePath(entrypoint_R, "/", TRUE)) setwd(basename_dir) fun(plumber::plumb()) setwd(rel_path_dir) fun(plumber::plumb(dir = .(dirname(rel_path_R)))) setwd(abs_path_dir) fun(plumber::plumb(dir = .(dirname(abs_path_R)))) } ## 'utils::Sweave' cannot handle file URLs nor connections if (requireNamespace("utils", quietly = TRUE)) { basename_Rnw <- basename_R; this.path::ext(basename_Rnw) <- ".Rnw" abs_path_Rnw <- abs_path_R; this.path::ext(abs_path_Rnw) <- ".Rnw" on.exit(unlink(abs_path_Rnw), add = TRUE) writeLines(c( "\\documentclass{article}", "", "\\begin{document}", "", "<<>>=", ## remove expressions starting with 'cat' { exprs <- parse(abs_path_R) exprs <- exprs[!vapply(exprs, function(expr) { is.call(expr) && identical(expr[[1L]], as.symbol("cat")) }, NA, USE.NAMES = FALSE)] this.path:::.writeCode(exprs, NULL) }, "@", "", "\\end{document}" ), abs_path_Rnw) options(`this.path::sys.path() expectation` = normalizePath(abs_path_Rnw, "/", TRUE)) setwd(basename_dir) outputname <- fun(utils::Sweave(.(basename_Rnw))) writeLines(readLines(outputname)) unlink(outputname) tmpdir <- tempfile("dir") on.exit(unlink(tmpdir, recursive = TRUE, force = TRUE)) dir.create(tmpdir) setwd(tmpdir) writeLines(readLines(fun(utils::Sweave(.(this.path::path.join("..", basename_Rnw)))))) } invisible() }) local({ FILE.R <- tempfile(fileext = ".R") on.exit(unlink(FILE.R)) this.path:::.writeCode({ stopifnot(identical( this.path::this.path(), getOption("this.path::this.path() expectation") )) }, FILE.R) oopt <- options( `this.path::this.path() expectation` = normalizePath(FILE.R, "/", TRUE), keep.source = TRUE ) on.exit(options(oopt), add = TRUE) eval( parse(FILE.R), structure(list2env(list(.packageName = FILE.R), parent = .BaseNamespaceEnv), path = FILE.R) ) eval(parse(FILE.R)) }) local({ FILE.R <- tempfile(fileext = ".R") on.exit(unlink(FILE.R)) this.path:::.writeCode({ list( this.path::src.path(original = TRUE), this.path::src.path(original = NA), this.path::src.path(), this.path::src.path(original = TRUE), this.path::src.path(original = NA) ) }, FILE.R) oopt <- options(keep.source = TRUE) on.exit(options(oopt), add = TRUE) stopifnot(identical( eval(parse(FILE.R)), list(FILE.R, normalizePath(FILE.R, "/", TRUE))[c(1L, 1L, 2L, 1L, 2L)] )) }) local({ FILE1.R <- tempfile(pattern = "file1_", fileext = ".R") on.exit(unlink(FILE1.R), add = TRUE) this.path:::.writeCode({ fun <- function(x) x fun1 <- function() fun(this.path::src.path()) }, FILE1.R) source(FILE1.R, environment(), keep.source = TRUE) FILE2.R <- tempfile(pattern = "file2_", fileext = ".R") on.exit(unlink(FILE2.R), add = TRUE) this.path:::.writeCode({ fun2 <- function() fun(this.path::src.path()) }, FILE2.R) source(FILE2.R, environment(), keep.source = TRUE) ## it might seem weird to use eval(expression()) ## it is just to prevent the expressions from having source references stopifnot(identical(eval(expression(fun1())), normalizePath(FILE1.R, "/", TRUE))) stopifnot(identical(eval(expression(fun2())), normalizePath(FILE2.R, "/", TRUE))) FILE3.R <- tempfile("file3_", fileext = ".R") on.exit(unlink(FILE3.R), add = TRUE) this.path:::.writeCode({ x <- list(fun1(), fun2(), fun(this.path::src.path())) }, FILE3.R) source(FILE3.R, environment(), keep.source = TRUE) stopifnot(identical(x, as.list(normalizePath(c(FILE1.R, FILE2.R, FILE3.R), "/", TRUE)))) })