downloading reverse dependencies ... downloading act_1.3.1.tar.gz ... ok downloading md4r_0.5.2.0.tar.gz ... ok downloading ngramr_1.9.3.tar.gz ... ok downloading orgutils_0.5-0.tar.gz ... ok downloading packagefinder_0.3.5.tar.gz ... ok downloading PMwR_0.19-3.tar.gz ... ok downloading provDebugR_1.0.1.tar.gz ... ok downloading VOSONDash_0.5.7.tar.gz ... ok downloading vosonSML_0.32.7.tar.gz ... ok downloading dataquieR_2.1.0.tar.gz ... ok downloading gie_0.1.1.tar.gz ... ok downloading inlpubs_1.1.1.tar.gz ... ok downloading xutils_0.0.2.tar.gz ... ok installing dependencies ‘connectapi’, ‘datetimeutils’, ‘diffmatchpatch’, ‘flexsiteboard’, ‘ggvenn’, ‘MultinomialCI’, ‘NMOF’, ‘orgutils’, ‘provGraphR’, ‘provParseR’, ‘qmrparser’, ‘rdt’, ‘rdtLite’, ‘robotstxt’, ‘textutils’, ‘vosonSML’ Warning: package ‘rdt’ is not available for this version of R A version of this package for your version of R might be available elsewhere, see the ideas at https://cran.r-project.org/doc/manuals/r-devel/R-admin.html#Installing-packages also installing the dependencies ‘provViz’, ‘spiderbar’ begin installing package ‘provViz’ begin installing package ‘spiderbar’ begin installing package ‘diffmatchpatch’ begin installing package ‘NMOF’ begin installing package ‘datetimeutils’ begin installing package ‘provParseR’ begin installing package ‘MultinomialCI’ begin installing package ‘qmrparser’ begin installing package ‘flexsiteboard’ begin installing package ‘ggvenn’ begin installing package ‘connectapi’ begin installing package ‘textutils’ * installing *source* package ‘MultinomialCI’ ... ** package ‘MultinomialCI’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (MultinomialCI) * installing *source* package ‘provViz’ ... ** package ‘provViz’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (provViz) begin installing package ‘rdtLite’ * installing *source* package ‘flexsiteboard’ ... ** package ‘flexsiteboard’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (flexsiteboard) * installing *source* package ‘textutils’ ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (textutils) begin installing package ‘orgutils’ begin installing package ‘vosonSML’ * installing *source* package ‘datetimeutils’ ... ** package ‘datetimeutils’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (datetimeutils) * installing *source* package ‘provParseR’ ... ** package ‘provParseR’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (provParseR) begin installing package ‘provGraphR’ * installing *source* package ‘qmrparser’ ... ** package ‘qmrparser’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (qmrparser) * installing *source* package ‘orgutils’ ... ** package ‘orgutils’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (orgutils) * installing *source* package ‘ggvenn’ ... ** package ‘ggvenn’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ggvenn) * installing *source* package ‘NMOF’ ... ** package ‘NMOF’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (NMOF) * installing *source* package ‘rdtLite’ ... ** package ‘rdtLite’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rdtLite) * installing *source* package ‘provGraphR’ ... ** package ‘provGraphR’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (provGraphR) * installing *source* package ‘vosonSML’ ... ** package ‘vosonSML’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (vosonSML) * installing *source* package ‘connectapi’ ... ** package ‘connectapi’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (connectapi) * installing *source* package ‘spiderbar’ ... ** package ‘spiderbar’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-13 (Debian 13.2.0-13) 13.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp59MZGF/R.INSTALL21fe213e0340c7/spiderbar/src' g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c agent.cpp -o agent.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c directive.cpp -o directive.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c psl.cpp -o psl.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c punycode.cpp -o punycode.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c repmain.cpp -o repmain.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c robots.cpp -o robots.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c url.cpp -o url.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c utf8.cpp -o utf8.o g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-13/lib -Wl,-O1 -o spiderbar.so RcppExports.o agent.o directive.o psl.o punycode.o repmain.o robots.o url.o utf8.o -L. -L/home/hornik/tmp/R-d-gcc-13/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp59MZGF/R.INSTALL21fe213e0340c7/spiderbar/src' installing to /home/hornik/tmp/CRAN/Library/00LOCK-spiderbar/00new/spiderbar/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (spiderbar) begin installing package ‘robotstxt’ * installing *source* package ‘robotstxt’ ... ** package ‘robotstxt’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (robotstxt) * installing *source* package ‘diffmatchpatch’ ... ** package ‘diffmatchpatch’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-13 (Debian 13.2.0-13) 13.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmphkWgTz/R.INSTALL21fe246441dbfb/diffmatchpatch/src' g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I../inst/include/ -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I../inst/include/ -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c diff.cpp -o diff.o In file included from common.h:4, from diff.cpp:1: ../inst/include/diff_match_patch.h: In instantiation of ‘static diff_match_patch::Diffs diff_match_patch::diff_fromDelta(const string_t&, const string_t&) [with stringT = std::__cxx11::basic_string; traits = diff_match_patch_traits; Diffs = std::__cxx11::list >::Diff, std::allocator >::Diff> >; string_t = std::__cxx11::basic_string]’: diff.cpp:122:31: required from here ../inst/include/diff_match_patch.h:1596:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1596 | if (pointer != text1.length()) { | ~~~~~~~~^~~~~~~~~~~~~~~~~ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I../inst/include/ -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c match.cpp -o match.o In file included from common.h:4, from match.cpp:1: ../inst/include/diff_match_patch.h: In instantiation of ‘int diff_match_patch::match_bitap(const string_t&, const string_t&, int) const [with stringT = std::__cxx11::basic_string; traits = diff_match_patch_traits; string_t = std::__cxx11::basic_string]’: ../inst/include/diff_match_patch.h:1631:14: required from ‘int diff_match_patch::match_main(const string_t&, const string_t&, int) const [with stringT = std::__cxx11::basic_string; traits = diff_match_patch_traits; string_t = std::__cxx11::basic_string]’ match.cpp:42:27: required from here ../inst/include/diff_match_patch.h:1723:26: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 1723 | if (best_loc > loc) { | ~~~~~~~~~^~~~~ ../inst/include/diff_match_patch.h: In member function ‘int diff_match_patch::match_bitap(const string_t&, const string_t&, int) const [with stringT = std::__cxx11::basic_string; traits = diff_match_patch_traits]’: ../inst/include/diff_match_patch.h:1741:5: warning: ‘rd’ may be used uninitialized [-Wmaybe-uninitialized] 1741 | delete [] rd; | ^~~~~~~~~~~~ ../inst/include/diff_match_patch.h:1674:10: note: ‘rd’ was declared here 1674 | int *rd; | ^~ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I../inst/include/ -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c options.cpp -o options.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I../inst/include/ -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c patch.cpp -o patch.o In file included from common.h:4, from patch.cpp:2: ../inst/include/diff_match_patch.h: In instantiation of ‘int diff_match_patch::match_bitap(const string_t&, const string_t&, int) const [with stringT = std::__cxx11::basic_string; traits = diff_match_patch_traits; string_t = std::__cxx11::basic_string]’: ../inst/include/diff_match_patch.h:1631:14: required from ‘int diff_match_patch::match_main(const string_t&, const string_t&, int) const [with stringT = std::__cxx11::basic_string; traits = diff_match_patch_traits; string_t = std::__cxx11::basic_string]’ ../inst/include/diff_match_patch.h:2007:21: required from ‘void diff_match_patch::patch_apply(const Patches&, const string_t&, std::pair >&) const [with stringT = std::__cxx11::basic_string; traits = diff_match_patch_traits; Patches = std::__cxx11::list >::Patch, std::allocator >::Patch> >; string_t = std::__cxx11::basic_string]’ ../inst/include/diff_match_patch.h:1973:63: required from ‘std::pair > diff_match_patch::patch_apply(const Patches&, const string_t&) const [with stringT = std::__cxx11::basic_string; traits = diff_match_patch_traits; Patches = std::__cxx11::list >::Patch, std::allocator >::Patch> >; string_t = std::__cxx11::basic_string]’ patch.cpp:23:29: required from here ../inst/include/diff_match_patch.h:1723:26: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 1723 | if (best_loc > loc) { | ~~~~~~~~~^~~~~ ../inst/include/diff_match_patch.h: In member function ‘int diff_match_patch::match_bitap(const string_t&, const string_t&, int) const [with stringT = std::__cxx11::basic_string; traits = diff_match_patch_traits]’: ../inst/include/diff_match_patch.h:1741:5: warning: ‘rd’ may be used uninitialized [-Wmaybe-uninitialized] 1741 | delete [] rd; | ^~~~~~~~~~~~ ../inst/include/diff_match_patch.h:1674:10: note: ‘rd’ was declared here 1674 | int *rd; | ^~ g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-13/lib -Wl,-O1 -o diffmatchpatch.so RcppExports.o diff.o match.o options.o patch.o -L/home/hornik/tmp/R-d-gcc-13/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmphkWgTz/R.INSTALL21fe246441dbfb/diffmatchpatch/src' installing to /home/hornik/tmp/CRAN/Library/00LOCK-diffmatchpatch/00new/diffmatchpatch/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (diffmatchpatch) checking textutils_0.4-1.tar.gz ... checking act_1.3.1.tar.gz ... checking md4r_0.5.2.0.tar.gz ... checking ngramr_1.9.3.tar.gz ... checking orgutils_0.5-0.tar.gz ... checking packagefinder_0.3.5.tar.gz ... checking PMwR_0.19-3.tar.gz ... checking provDebugR_1.0.1.tar.gz ... checking VOSONDash_0.5.7.tar.gz ... checking vosonSML_0.32.7.tar.gz ... checking dataquieR_2.1.0.tar.gz ... checking gie_0.1.1.tar.gz ... checking inlpubs_1.1.1.tar.gz ... checking xutils_0.0.2.tar.gz ... Depends: Package: textutils Imports: utils Timings: user system elapsed textutils 19.259 3.064 23.522 Results: Check status summary: NOTE OK Source packages 0 1 Reverse depends 1 12 Check results summary: textutils ... OK rdepends_act ... OK rdepends_dataquieR ... OK rdepends_gie ... OK rdepends_inlpubs ... OK rdepends_md4r ... OK rdepends_ngramr ... OK rdepends_orgutils ... OK rdepends_packagefinder ... OK rdepends_PMwR ... OK rdepends_provDebugR ... NOTE * checking package dependencies ... NOTE rdepends_VOSONDash ... OK rdepends_vosonSML ... OK rdepends_xutils ... OK