## Data exptabpath <- system.file("extdata", "exptab-preprocessing.csv", package="tepr") gencodepath <- system.file("extdata", "gencode-chr13.gtf", package = "tepr") ## Call the function to test allannobed <- retrieveanno(exptabpath, gencodepath, verbose = FALSE) ## ---- Comparing to expected object ---- ## expectedobj <- readRDS(system.file("extdata", "allannobed.rds", package="tepr")) test_that("retrieveanno works properly", { expect_equal(allannobed, expectedobj) })