* using log directory 'd:/RCompile/CRANincoming/R-devel/templateICAr.Rcheck' * using R Under development (unstable) (2024-10-10 r87224 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 13.2.0 GNU Fortran (GCC) 13.2.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'templateICAr/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'templateICAr' version '0.8.6' * package encoding: UTF-8 * checking CRAN incoming feasibility ... [12s] INFO Maintainer: 'Amanda Mejia ' Suggests or Enhances not in mainstream repositories: INLA Availability using Additional_repositories specification: INLA yes https://inla.r-inla-download.org/R/testing * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'templateICAr' can be installed ... OK * used C++ compiler: 'g++.exe (GCC) 13.2.0' * checking installed package size ... OK * checking package directory ... OK * checking for future file timestamps ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [25s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: bdiag_m.Rd: dgCMatrix-class bdiag_m2.Rd: dgCMatrix-class Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking pragmas in C/C++ headers and code ... OK * checking compilation flags used ... OK * checking compiled code ... OK * checking examples ... [19s] NOTE Examples with CPU (user + system) or elapsed time > 10s user system elapsed estimate_template 15.35 0.32 15.66 * checking for unstated dependencies in 'tests' ... OK * checking tests ... OK Running 'run_templateICAr_tests.R' Running 'testthat.R' * checking PDF version of manual ... [14s] OK * checking HTML version of manual ... [13s] NOTE Found the following HTML validation problems: bdiag_m.html:40:9 (bdiag_m.Rd:12): Error: is not recognized! bdiag_m.html:40:9 (bdiag_m.Rd:12): Warning: discarding unexpected bdiag_m.html:40:17 (bdiag_m.Rd:12): Error: is not recognized! bdiag_m.html:40:17 (bdiag_m.Rd:12): Warning: discarding unexpected * DONE Status: 3 NOTEs