* using log directory ‘/srv/hornik/tmp/CRAN_pretest/templateICAr.Rcheck’
* using R Under development (unstable) (2024-10-10 r87224)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    Debian clang version 18.1.8 (9)
    Debian flang-new version 18.1.8 (9)
* running under: Debian GNU/Linux trixie/sid
* using session charset: UTF-8
* checking for file ‘templateICAr/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘templateICAr’ version ‘0.8.6’
* package encoding: UTF-8
* checking CRAN incoming feasibility ... [5s/7s] INFO
Maintainer: ‘Amanda Mejia <mandy.mejia@gmail.com>’

Suggests or Enhances not in mainstream repositories:
  INLA
Availability using Additional_repositories specification:
  INLA   yes   https://inla.r-inla-download.org/R/testing
* checking package namespace information ... OK
* checking package dependencies ... INFO
Package suggested but not available for checking: ‘INLA’
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘templateICAr’ can be installed ... [24s/24s] OK
* used C++ compiler: ‘Debian clang version 18.1.8 (11)’
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [2s/2s] OK
* checking whether the package can be loaded with stated dependencies ... [2s/2s] OK
* checking whether the package can be unloaded cleanly ... [2s/2s] OK
* checking whether the namespace can be loaded with stated dependencies ... [2s/2s] OK
* checking whether the namespace can be unloaded cleanly ... [2s/2s] OK
* checking loading without being on the library search path ... [2s/2s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [16s/16s] OK
* checking Rd files ... [0s/0s] OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  bdiag_m.Rd: dgCMatrix-class
  bdiag_m2.Rd: dgCMatrix-class
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking pragmas in C/C++ headers and code ... OK
* checking compilation flags used ... OK
* checking compiled code ... OK
* checking examples ... [16s/16s] NOTE
Examples with CPU (user + system) or elapsed time > 5s
                    user system elapsed
estimate_template 13.127  0.139  13.272
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ... [5s/5s] OK
  Running ‘run_templateICAr_tests.R’ [3s/3s]
  Running ‘testthat.R’ [2s/2s]
* checking PDF version of manual ... [4s/4s] OK
* checking HTML version of manual ... [2s/2s] NOTE
Found the following HTML validation problems:
bdiag_m.html:40:9 (bdiag_m.Rd:12): Error: <mat1> is not recognized!
bdiag_m.html:40:9 (bdiag_m.Rd:12): Warning: discarding unexpected <mat1>
bdiag_m.html:40:17 (bdiag_m.Rd:12): Error: <mat2> is not recognized!
bdiag_m.html:40:17 (bdiag_m.Rd:12): Warning: discarding unexpected <mat2>
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE
Status: 3 NOTEs