context("fungorum") test_that("fungorum - fg_name_search", { skip_on_cran() vcr::use_cassette("fg_name_search", match_requests_on = c('method', 'path'), { aa <- fg_name_search(q = "Gymnopus", limit = 2) bb <- fg_name_search(q = "Gymnopus") }, preserve_exact_body_bytes = TRUE) expect_is(aa, "data.frame") expect_is(bb, "data.frame") expect_true(any(grepl("authors", names(aa)))) expect_equal(NROW(aa), 2) expect_equal(unique(aa$infraspecific_epithet), "Gymnopus") expect_true(any(grepl("authors", names(bb)))) expect_equal(NROW(bb), 10) expect_equal(unique(bb$infraspecific_epithet)[1], "Gymnopus") }) test_that("fungorum - fg_epithet_search", { skip_on_cran() vcr::use_cassette("fg_epithet_search", match_requests_on = c('method', 'path'), { aa <- fg_epithet_search(q = "phalloides", limit = 2) }) expect_is(aa, "data.frame") expect_true(any(grepl("authors", names(aa)))) expect_equal(NROW(aa), 2) expect_equal(unique(aa$infraspecific_rank)[1], "sp.") }) test_that("fungorum - fg_name_by_key", { skip_on_cran() vcr::use_cassette("fg_name_by_key", match_requests_on = c('method', 'path'), { aa <- fg_name_by_key(17703) }) expect_is(aa, "data.frame") expect_true(any(grepl("name_of_fungus", names(aa)))) expect_true(any(grepl("uuid", names(aa)))) expect_equal(NROW(aa), 1) }) test_that("fungorum - fg_name_full_by_lsid", { skip_on_cran() vcr::use_cassette("fg_name_full_by_lsid", match_requests_on = c('method', 'path'), { aa <- fg_name_full_by_lsid("urn:lsid:indexfungorum.org:names:81085") }) expect_is(aa, "character") expect_equal(length(aa), 1) expect_true(grepl("Omphalotaceae", aa)) expect_true(grepl("1985", aa)) }) #test_that("fungorum - fg_all_updated_names", { # skip_on_cran() # # date <- as.numeric(gsub("-", "", as.character(Sys.Date()))) - 200 # aa <- fg_all_updated_names(date = date) # # expect_is(aa, "data.frame") # expect_gt(NROW(aa), 1) # expect_match(aa[1,], "indexfungorum") # # date <- as.numeric(gsub("-", "", as.character(Sys.Date() + 1))) # expect_equal(NROW(fg_all_updated_names(date = date)), 0) #}) # FIXME: when date injection for vcr fixed, come back to this; # also, the function is failing # test_that("fungorum - fg_deprecated_names", { # skip_on_cran() # date <- as.numeric(gsub("-", "", as.character(Sys.Date() - 30))) # aa <- fg_deprecated_names(date = date) # expect_is(aa, "data.frame") # expect_gt(NROW(aa), 1) # expect_match(aa[1,1], "indexfungorum") # date <- as.numeric(gsub("-", "", as.character(Sys.Date() + 1))) # expect_equal(NROW(fg_deprecated_names(date = date)), 0) # }) test_that("fungorum - fg_author_search", { skip_on_cran() vcr::use_cassette("fg_author_search", match_requests_on = c('method', 'path'), { aa <- fg_author_search(q = "Fayod", limit = 2) }, preserve_exact_body_bytes = TRUE) expect_is(aa, "data.frame") expect_equal(NROW(aa), 2) expect_match(aa$authors, "Fayod") })