downloading reverse dependencies ... downloading geotargets_0.3.1.tar.gz ... ok downloading gittargets_0.0.7.tar.gz ... ok downloading jagstargets_1.2.2.tar.gz ... ok downloading ravepipeline_0.0.3.tar.gz ... ok downloading sqltargets_0.2.1.tar.gz ... ok downloading tarchetypes_0.13.1.tar.gz ... ok downloading tarchives_0.1.1.tar.gz ... ok downloading chopin_0.9.9.tar.gz ... ok downloading data.validator_0.2.1.tar.gz ... ok downloading knitr_1.50.tar.gz ... ok downloading repana_2.2.1.tar.gz ... ok downloading worcs_0.1.19.tar.gz ... ok installing dependencies ‘anticlust’, ‘assertr’, ‘autometric’, ‘clustermq’, ‘credentials’, ‘crew’, ‘dggridR’, ‘dipsaus’, ‘distill’, ‘filearray’, ‘fixtuRes’, ‘future.batchtools’, ‘future.mirai’, ‘gdalraster’, ‘googleCloudStorageR’, ‘h3r’, ‘ieegio’, ‘jinjar’, ‘JuliaCall’, ‘magrittr’, ‘missRanger’, ‘papaja’, ‘prereg’, ‘qs2’, ‘rpymat’, ‘shidashi’, ‘shiny.semantic’, ‘tarchetypes’, ‘targets’, ‘threeBrain’, ‘tidySEM’ also installing the dependencies ‘pkgfilecache’, ‘pbdZMQ’, ‘RcppInt64’, ‘freesurferformats’, ‘readNSx’, ‘rpyANTs’, ‘IRkernel’, ‘h3lib’, ‘semantic.assets’, ‘tinylabels’, ‘rmdfiltr’ begin installing package ‘pkgfilecache’ begin installing package ‘pbdZMQ’ begin installing package ‘RcppInt64’ begin installing package ‘readNSx’ begin installing package ‘h3lib’ begin installing package ‘semantic.assets’ begin installing package ‘tinylabels’ begin installing package ‘rmdfiltr’ begin installing package ‘autometric’ begin installing package ‘clustermq’ begin installing package ‘magrittr’ begin installing package ‘future.batchtools’ begin installing package ‘googleCloudStorageR’ begin installing package ‘qs2’ begin installing package ‘filearray’ begin installing package ‘jinjar’ begin installing package ‘anticlust’ begin installing package ‘future.mirai’ begin installing package ‘JuliaCall’ begin installing package ‘prereg’ begin installing package ‘missRanger’ begin installing package ‘credentials’ * installing *source* package ‘rmdfiltr’ ... ** this is package ‘rmdfiltr’ version ‘0.1.5’ ** package ‘rmdfiltr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rmdfiltr) * installing *source* package ‘prereg’ ... ** this is package ‘prereg’ version ‘0.6.0’ ** package ‘prereg’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (prereg) * installing *source* package ‘pkgfilecache’ ... ** this is package ‘pkgfilecache’ version ‘0.1.5’ ** package ‘pkgfilecache’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pkgfilecache) begin installing package ‘freesurferformats’ * installing *source* package ‘magrittr’ ... ** this is package ‘magrittr’ version ‘2.0.4’ ** package ‘magrittr’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-3) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmprwjo15/R.INSTALL418d625328127/magrittr/src' gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c pipe.c -o pipe.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c utils.c -o utils.o gcc-15 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o magrittr.so pipe.o utils.o -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmprwjo15/R.INSTALL418d625328127/magrittr/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-magrittr/00new/magrittr/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (magrittr) begin installing package ‘crew’ begin installing package ‘dipsaus’ begin installing package ‘shidashi’ begin installing package ‘distill’ begin installing package ‘dggridR’ begin installing package ‘assertr’ begin installing package ‘fixtuRes’ begin installing package ‘tidySEM’ begin installing package ‘targets’ * installing *source* package ‘tinylabels’ ... ** this is package ‘tinylabels’ version ‘0.2.5’ ** package ‘tinylabels’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tinylabels) begin installing package ‘papaja’ * installing *source* package ‘missRanger’ ... ** this is package ‘missRanger’ version ‘2.6.1’ ** package ‘missRanger’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (missRanger) * installing *source* package ‘credentials’ ... ** this is package ‘credentials’ version ‘2.0.3’ ** package ‘credentials’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (credentials) * installing *source* package ‘future.mirai’ ... ** this is package ‘future.mirai’ version ‘0.10.1’ ** package ‘future.mirai’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (future.mirai) * installing *source* package ‘autometric’ ... ** this is package ‘autometric’ version ‘0.1.2’ ** package ‘autometric’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-3) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpnESRmT/R.INSTALL418c31b1191ab/autometric/src' gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c autometric.c -o autometric.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c export.c -o export.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c metrics.c -o metrics.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c metrics_linux.c -o metrics_linux.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c metrics_mac.c -o metrics_mac.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c metrics_windows.c -o metrics_windows.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c thread.c -o thread.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c timers.c -o timers.o gcc-15 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o autometric.so autometric.o export.o metrics.o metrics_linux.o metrics_mac.o metrics_windows.o thread.o timers.o -lpthread -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpnESRmT/R.INSTALL418c31b1191ab/autometric/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-autometric/00new/autometric/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (autometric) * installing *source* package ‘semantic.assets’ ... ** this is package ‘semantic.assets’ version ‘1.1.0’ ** package ‘semantic.assets’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (semantic.assets) begin installing package ‘shiny.semantic’ * installing *source* package ‘googleCloudStorageR’ ... ** this is package ‘googleCloudStorageR’ version ‘0.7.0’ ** package ‘googleCloudStorageR’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (googleCloudStorageR) * installing *source* package ‘shidashi’ ... ** this is package ‘shidashi’ version ‘0.1.6’ ** package ‘shidashi’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (shidashi) * installing *source* package ‘assertr’ ... ** this is package ‘assertr’ version ‘3.0.1’ ** package ‘assertr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (assertr) * installing *source* package ‘h3lib’ ... ** this is package ‘h3lib’ version ‘0.1.4’ ** package ‘h3lib’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-3) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpI5eF1M/R.INSTALL418cd325b6e3f/h3lib/src' gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c algos.c -o algos.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c baseCells.c -o baseCells.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c bbox.c -o bbox.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c coordijk.c -o coordijk.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c directedEdge.c -o directedEdge.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c faceijk.c -o faceijk.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c h3Assert.c -o h3Assert.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c h3Index.c -o h3Index.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c iterators.c -o iterators.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c latLng.c -o latLng.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c linkedGeo.c -o linkedGeo.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c localij.c -o localij.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c mathExtensions.c -o mathExtensions.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c polyfill.c -o polyfill.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c polygon.c -o polygon.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vec2d.c -o vec2d.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vec3d.c -o vec3d.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vertex.c -o vertex.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vertexGraph.c -o vertexGraph.o gcc-15 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o h3lib.so algos.o baseCells.o bbox.o coordijk.o directedEdge.o faceijk.o h3Assert.o h3Index.o init.o iterators.o latLng.o linkedGeo.o localij.o mathExtensions.o polyfill.o polygon.o vec2d.o vec3d.o vertex.o vertexGraph.o -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpI5eF1M/R.INSTALL418cd325b6e3f/h3lib/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-h3lib/00new/h3lib/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (h3lib) begin installing package ‘h3r’ * installing *source* package ‘future.batchtools’ ... ** this is package ‘future.batchtools’ version ‘0.20.0’ ** package ‘future.batchtools’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (future.batchtools) * installing *source* package ‘pbdZMQ’ ... ** this is package ‘pbdZMQ’ version ‘0.3-14’ ** package ‘pbdZMQ’ successfully unpacked and MD5 sums checked ** using staged installation checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.25... yes checking for zmq... yes checking for zmq_4_1_6... checking for zmq... yes ****************** Results of pbdZMQ package configure ***************** >> GET_PKG_CONFIG = yes >> GET_SYSTEM_ZMQ = yes >> GET_SYSTEM_ZMQ_430 = yes >> PKG_CONFIG = /usr/bin/pkg-config >> SYSTEM_ZMQ_INCLUDEDIR = /usr/include >> SYSTEM_ZMQ_LIBDIR = /usr/lib/x86_64-linux-gnu >> ENABLE_INTERNAL_ZMQ = no >> INTERNAL_ZMQ_INCLUDEDIR = ./zmqsrc/include >> INTERNAL_ZMQ_LIBDIR = ./ >> EXTERNAL_ZMQ_INCLUDE = >> EXTERNAL_ZMQ_LDFLAGS = >> ZMQ_INCLUDE = -I/usr/include >> ZMQ_LDFLAGS = -L/usr/lib/x86_64-linux-gnu -lzmq >> EXT_LIBS = >> ZMQ_POLLER = select ************************************************************************ configure: creating ./config.status config.status: creating src/Makevars configure: creating ./config.status config.status: creating src/Makevars config.status: creating src/build_zmq configure: creating ./config.status config.status: creating src/Makevars config.status: creating src/build_zmq config.status: creating R/zzz.r ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-3) 15.2.0’ using C++ compiler: ‘g++-15 (Debian 15.2.0-3) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpHcTlWn/R.INSTALL418b71628787a/pbdZMQ/src' gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I/usr/include -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c R_zmq_context.c -o R_zmq_context.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I/usr/include -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c R_zmq_socket.c -o R_zmq_socket.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I/usr/include -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c R_zmq_sendrecv.c -o R_zmq_sendrecv.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I/usr/include -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c R_zmq_utility.c -o R_zmq_utility.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I/usr/include -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c R_zmq_message.c -o R_zmq_message.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I/usr/include -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c R_zmq_transfer.c -o R_zmq_transfer.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I/usr/include -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c shellexec_wcc.c -o shellexec_wcc.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I/usr/include -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c R_zmq_poll.c -o R_zmq_poll.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I/usr/include -fpic -g -O2 -Wall -pedantic -mtune=native -c R_cxx_dummy.cc -o R_cxx_dummy.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I/usr/include -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c zzz.c -o zzz.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o pbdZMQ.so R_zmq_context.o R_zmq_socket.o R_zmq_sendrecv.o R_zmq_utility.o R_zmq_message.o R_zmq_transfer.o shellexec_wcc.o R_zmq_poll.o R_cxx_dummy.o zzz.o -L/usr/lib/x86_64-linux-gnu -lzmq -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpHcTlWn/R.INSTALL418b71628787a/pbdZMQ/src' installing via 'install.libs.R' to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-pbdZMQ/00new/pbdZMQ ** R ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pbdZMQ) begin installing package ‘IRkernel’ * installing *source* package ‘distill’ ... ** this is package ‘distill’ version ‘1.6’ ** package ‘distill’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (distill) * installing *source* package ‘fixtuRes’ ... ** this is package ‘fixtuRes’ version ‘0.1.3’ ** package ‘fixtuRes’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (fixtuRes) * installing *source* package ‘shiny.semantic’ ... ** this is package ‘shiny.semantic’ version ‘0.5.1’ ** package ‘shiny.semantic’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (shiny.semantic) * installing *source* package ‘JuliaCall’ ... ** this is package ‘JuliaCall’ version ‘0.17.6’ ** package ‘JuliaCall’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-3) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpTKKodz/R.INSTALL418e2519a4103/JuliaCall/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c JuliaCall.cpp -o JuliaCall.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c libjulia.cpp -o libjulia.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o JuliaCall.so JuliaCall.o RcppExports.o libjulia.o -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpTKKodz/R.INSTALL418e2519a4103/JuliaCall/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-JuliaCall/00new/JuliaCall/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (JuliaCall) * installing *source* package ‘h3r’ ... ** this is package ‘h3r’ version ‘0.1.2’ ** package ‘h3r’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-3) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp6iOIRx/R.INSTALL4253451cdad8e/h3r/src' gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/h3lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c h3rDirectedEdges.c -o h3rDirectedEdges.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/h3lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c h3rHierarchy.c -o h3rHierarchy.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/h3lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c h3rIndexing.c -o h3rIndexing.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/h3lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c h3rInspection.c -o h3rInspection.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/h3lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c h3rMiscellaneous.c -o h3rMiscellaneous.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/h3lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c h3rRegions.c -o h3rRegions.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/h3lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c h3rTraversal.c -o h3rTraversal.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/h3lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c h3rUtils.c -o h3rUtils.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/h3lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c h3rVertexes.c -o h3rVertexes.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/h3lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-15 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o h3r.so h3rDirectedEdges.o h3rHierarchy.o h3rIndexing.o h3rInspection.o h3rMiscellaneous.o h3rRegions.o h3rTraversal.o h3rUtils.o h3rVertexes.o init.o -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp6iOIRx/R.INSTALL4253451cdad8e/h3r/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-h3r/00new/h3r/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (h3r) * installing *source* package ‘IRkernel’ ... ** this is package ‘IRkernel’ version ‘1.3.2’ ** package ‘IRkernel’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (IRkernel) begin installing package ‘rpymat’ * installing *source* package ‘papaja’ ... ** this is package ‘papaja’ version ‘0.1.3’ ** package ‘papaja’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (papaja) * installing *source* package ‘RcppInt64’ ... ** this is package ‘RcppInt64’ version ‘0.0.5’ ** package ‘RcppInt64’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-3) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpAqJMOw/R.INSTALL418b031b1858e/RcppInt64/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c int64.cpp -o int64.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c nanotime.cpp -o nanotime.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o RcppInt64.so RcppExports.o int64.o nanotime.o -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpAqJMOw/R.INSTALL418b031b1858e/RcppInt64/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-RcppInt64/00new/RcppInt64/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (RcppInt64) begin installing package ‘gdalraster’ * installing *source* package ‘anticlust’ ... ** this is package ‘anticlust’ version ‘0.8.10-1’ ** package ‘anticlust’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-3) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmph43Mtc/R.INSTALL418eb43353a63/anticlust/src' gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c anticlust_init.c -o anticlust_init.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c bicriterion_iterated_local_search_call.c -o bicriterion_iterated_local_search_call.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c categorical-contraints.c -o categorical-contraints.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c dispersion_anticlustering.c -o dispersion_anticlustering.o dispersion_anticlustering.c: In function ‘dispersion_anticlustering’: dispersion_anticlustering.c:213:25: warning: ‘best_partner’ may be used uninitialized [-Wmaybe-uninitialized] 213 | swap(n, i, best_partner, PTR_NODES); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ dispersion_anticlustering.c:137:16: note: ‘best_partner’ was declared here 137 | size_t best_partner; | ^~~~~~~~~~~~ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c distance-anticlustering.c -o distance-anticlustering.o distance-anticlustering.c: In function ‘distance_anticlustering_’: distance-anticlustering.c:270:33: warning: ‘best_partner’ may be used uninitialized [-Wmaybe-uninitialized] 270 | swap(n, i, best_partner, PTR_NODES); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ distance-anticlustering.c:187:16: note: ‘best_partner’ was declared here 187 | size_t best_partner; | ^~~~~~~~~~~~ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c fast-kmeans-anticlustering.c -o fast-kmeans-anticlustering.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c free-memory.c -o free-memory.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c kmeans-anticlustering.c -o kmeans-anticlustering.o kmeans-anticlustering.c: In function ‘kmeans_anticlustering’: kmeans-anticlustering.c:241:25: warning: ‘best_partner’ may be used uninitialized [-Wmaybe-uninitialized] 241 | swap(n, i, best_partner, PTR_NODES); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmeans-anticlustering.c:177:16: note: ‘best_partner’ was declared here 177 | size_t best_partner; | ^~~~~~~~~~~~ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c misc-array-methods.c -o misc-array-methods.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c set-up-data-structures.c -o set-up-data-structures.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c three-phase-dispersion.c -o three-phase-dispersion.o three-phase-dispersion.c: In function ‘SearchAlgorithmDisperion’: three-phase-dispersion.c:443:12: warning: unused variable ‘elapsed_time’ [-Wunused-variable] 443 | double elapsed_time = (double) (end_time - start_time)/CLOCKS_PER_SEC; | ^~~~~~~~~~~~ three-phase-dispersion.c: In function ‘DirectPerturbationDispersion’: three-phase-dispersion.c:651:13: warning: ‘selectedElement’ may be used uninitialized [-Wmaybe-uninitialized] 651 | adding(selectedElement, k, s, min_distance_tuple, min_distance_per_cluster); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ three-phase-dispersion.c:549:30: note: ‘selectedElement’ was declared here 549 | int new_ind, ind1, ind2, selectedElement, minElement; | ^~~~~~~~~~~~~~~ three-phase-dispersion.c:654:15: warning: ‘selectedGroup’ may be used uninitialized [-Wmaybe-uninitialized] 654 | Rd[selectedGroup] = -1; | ^ three-phase-dispersion.c:610:13: note: ‘selectedGroup’ was declared here 610 | int selectedGroup; | ^~~~~~~~~~~~~ three-phase-dispersion.c: In function ‘CrossoverDispersion’: three-phase-dispersion.c:809:20: warning: ‘selectedGroup’ may be used uninitialized [-Wmaybe-uninitialized] 809 | if (s2[j] == selectedGroup) { | ^ three-phase-dispersion.c:698:15: note: ‘selectedGroup’ was declared here 698 | int i, j, selectedGroup; | ^~~~~~~~~~~~~ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c three_phase_search_dynamic_population_size.c -o three_phase_search_dynamic_population_size.o three_phase_search_dynamic_population_size.c: In function ‘DirectPerturbationDiversity’: three_phase_search_dynamic_population_size.c:605:17: warning: ‘selectedGroup’ may be used uninitialized [-Wmaybe-uninitialized] 605 | s[Rd[selectedGroup]] = i; | ^ three_phase_search_dynamic_population_size.c:573:13: note: ‘selectedGroup’ was declared here 573 | int selectedGroup; | ^~~~~~~~~~~~~ three_phase_search_dynamic_population_size.c:627:26: warning: ‘groupWithMaxAvgCon’ may be used uninitialized [-Wmaybe-uninitialized] 627 | if (SizeGroup[groupWithMaxAvgCon] < UB[groupWithMaxAvgCon]) { | ^ three_phase_search_dynamic_population_size.c:612:13: note: ‘groupWithMaxAvgCon’ was declared here 612 | int groupWithMaxAvgCon; | ^~~~~~~~~~~~~~~~~~ three_phase_search_dynamic_population_size.c: In function ‘process_partition’: three_phase_search_dynamic_population_size.c:668:12: warning: ‘selectedGroup’ may be used uninitialized [-Wmaybe-uninitialized] 668 | if (s1[i] == selectedGroup) { | ^ three_phase_search_dynamic_population_size.c:655:12: note: ‘selectedGroup’ was declared here 655 | int i, selectedGroup, processedCount, selectedElement; | ^~~~~~~~~~~~~ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c variance-objective.c -o variance-objective.o gcc-15 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o anticlust.so anticlust_init.o bicriterion_iterated_local_search_call.o categorical-contraints.o dispersion_anticlustering.o distance-anticlustering.o fast-kmeans-anticlustering.o free-memory.o kmeans-anticlustering.o misc-array-methods.o set-up-data-structures.o three-phase-dispersion.o three_phase_search_dynamic_population_size.o variance-objective.o -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmph43Mtc/R.INSTALL418eb43353a63/anticlust/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-anticlust/00new/anticlust/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (anticlust) * installing *source* package ‘freesurferformats’ ... ** this is package ‘freesurferformats’ version ‘1.0.0’ ** package ‘freesurferformats’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (freesurferformats) * installing *source* package ‘readNSx’ ... ** this is package ‘readNSx’ version ‘0.0.5’ ** package ‘readNSx’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-3) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpa0sQP6/R.INSTALL418be766db5ff/readNSx/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c cpp11.cpp -o cpp11.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c rawToSEXP.cpp -o rawToSEXP.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c readBCI2R.cpp -o readBCI2R.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c readNSxDataPacket.cpp -o readNSxDataPacket.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o readNSx.so cpp11.o rawToSEXP.o readBCI2R.o readNSxDataPacket.o -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpa0sQP6/R.INSTALL418be766db5ff/readNSx/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-readNSx/00new/readNSx/libs ** R ** inst ** byte-compile and prepare package for lazy loading R6Class LazyH5Internal: finalize() method is public, but it should be private as of R6 2.4.0. This code will continue to work, but in a future version of R6, finalize() will be required to be private. ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (readNSx) * installing *source* package ‘crew’ ... ** this is package ‘crew’ version ‘1.2.1’ ** package ‘crew’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (crew) * installing *source* package ‘rpymat’ ... ** this is package ‘rpymat’ version ‘0.1.8’ ** package ‘rpymat’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rpymat) begin installing package ‘rpyANTs’ * installing *source* package ‘rpyANTs’ ... ** this is package ‘rpyANTs’ version ‘0.0.5’ ** package ‘rpyANTs’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rpyANTs) * installing *source* package ‘tidySEM’ ... ** this is package ‘tidySEM’ version ‘0.2.9’ ** package ‘tidySEM’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tidySEM) * installing *source* package ‘targets’ ... ** this is package ‘targets’ version ‘1.11.4’ ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (targets) begin installing package ‘tarchetypes’ * installing *source* package ‘qs2’ ... ** this is package ‘qs2’ version ‘0.1.5’ ** package ‘qs2’ successfully unpacked and MD5 sums checked ** using staged installation checking for pkg-config... /usr/bin/pkg-config checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C++ compiler... yes checking whether g++-15 -std=gnu++17 accepts -g... yes C++ compiler: g++-15 -std=gnu++17 zstd 1.5.7 library detected -- skipping zstd compilation Fixed blocksize Not using TBB configure: creating ./config.status config.status: creating src/Makevars ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-3) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp4KHkIO/R.INSTALL418e0e847f54/qs2/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DRCPP_USE_UNWIND_PROTECT -DRCPP_NO_RTTI -DRCPP_NO_SUGAR -I../inst/include -I. -DIS_UTF8_LOCALE=1 -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/stringfish/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DRCPP_PARALLEL_USE_TBB=0 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DRCPP_USE_UNWIND_PROTECT -DRCPP_NO_RTTI -DRCPP_NO_SUGAR -I../inst/include -I. -DIS_UTF8_LOCALE=1 -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/stringfish/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DRCPP_PARALLEL_USE_TBB=0 -fpic -g -O2 -Wall -pedantic -mtune=native -c qx_functions.cpp -o qx_functions.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o qs2.so RcppExports.o qx_functions.o -L. -lzstd -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp4KHkIO/R.INSTALL418e0e847f54/qs2/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-qs2/00new/qs2/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (qs2) * installing *source* package ‘tarchetypes’ ... ** this is package ‘tarchetypes’ version ‘0.13.1’ ** package ‘tarchetypes’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tarchetypes) * installing *source* package ‘dipsaus’ ... ** this is package ‘dipsaus’ version ‘0.3.1’ ** package ‘dipsaus’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-3) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp2VnnAS/R.INSTALL4226162d26480/dipsaus/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c forelse.cpp -o forelse.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c rcpp_arrayShift.cpp -o rcpp_arrayShift.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c rcpp_baselineArray.cpp -o rcpp_baselineArray.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c rcpp_collapse.cpp -o rcpp_collapse.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c rcpp_fastCov.cpp -o rcpp_fastCov.o rcpp_fastCov.cpp: In member function ‘virtual void FastCov::operator()(std::size_t, std::size_t)’: rcpp_fastCov.cpp:47:24: warning: comparison of integer expressions of different signedness: ‘R_xlen_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 47 | for(jj = begin; jj < end; jj++, pt_cm2++){ | ~~~^~~~~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c rcpp_median.cpp -o rcpp_median.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c utils.cpp -o utils.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o dipsaus.so RcppExports.o forelse.o rcpp_arrayShift.o rcpp_baselineArray.o rcpp_collapse.o rcpp_fastCov.o rcpp_median.o utils.o -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp2VnnAS/R.INSTALL4226162d26480/dipsaus/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-dipsaus/00new/dipsaus/libs ** R ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (dipsaus) begin installing package ‘threeBrain’ * installing *source* package ‘clustermq’ ... ** this is package ‘clustermq’ version ‘0.9.9’ ** package ‘clustermq’ successfully unpacked and MD5 sums checked ** using staged installation * system has libzmq -> linking system library * libzmq without DRAFT API found -> disabling crash monitor feature ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-3) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpgnEyvx/R.INSTALL418d449c7844b/clustermq/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -isystem /usr/include/mit-krb5 -I/usr/include/pgm-5.3 -I/usr/include/libxml2 -I/usr/include/x86_64-linux-gnu -fPIC -Icppzmq -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c CMQMaster.cpp -o CMQMaster.o In file included from CMQMaster.cpp:2: CMQMaster.h: In member function ‘bool CMQMaster::close(int)’: CMQMaster.h:65:26: warning: variable ‘n’ set but not used [-Wunused-but-set-variable] 65 | auto n = recv_multipart(sock, std::back_inserter(msgs)); | ^ CMQMaster.h:62:21: warning: unused variable ‘rc’ [-Wunused-variable] 62 | int rc = zmq::poll(pitems, time_left); | ^~ CMQMaster.h: In member function ‘SEXPREC* CMQMaster::recv(int)’: CMQMaster.h:107:18: warning: variable ‘n’ set but not used [-Wunused-but-set-variable] 107 | auto n = recv_multipart(sock, std::back_inserter(msgs)); | ^ CMQMaster.h:109:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 109 | } while(data_offset >= msgs.size()); | ~~~~~~~~~~~~^~~~~~~~~~~~~~ CMQMaster.h: In member function ‘void CMQMaster::proxy_submit_cmd(SEXP, int)’: CMQMaster.h:152:14: warning: variable ‘n’ set but not used [-Wunused-but-set-variable] 152 | auto n = recv_multipart(sock, std::back_inserter(msgs)); | ^ CMQMaster.h: In member function ‘int CMQMaster::register_peer(std::vector&)’: CMQMaster.h:341:25: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 341 | if (msgs.size() > ++cur_i) { | ~~~~~~~~~~~~^~~~~~~~~ CMQMaster.h:356:26: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, CMQMaster::worker_t>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 356 | if (peers.size() > prev_size && w.status == wlife_t::active) { | ~~~~~~~~~~~~~^~~~~~~~~~~ CMQMaster.h:361:25: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 361 | if (msgs.size() > cur_i+2) { | ~~~~~~~~~~~~^~~~~~~~~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -isystem /usr/include/mit-krb5 -I/usr/include/pgm-5.3 -I/usr/include/libxml2 -I/usr/include/x86_64-linux-gnu -fPIC -Icppzmq -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c CMQProxy.cpp -o CMQProxy.o In file included from CMQProxy.h:3, from CMQProxy.cpp:2: CMQMaster.h: In member function ‘bool CMQMaster::close(int)’: CMQMaster.h:65:26: warning: variable ‘n’ set but not used [-Wunused-but-set-variable] 65 | auto n = recv_multipart(sock, std::back_inserter(msgs)); | ^ CMQMaster.h:62:21: warning: unused variable ‘rc’ [-Wunused-variable] 62 | int rc = zmq::poll(pitems, time_left); | ^~ CMQMaster.h: In member function ‘SEXPREC* CMQMaster::recv(int)’: CMQMaster.h:107:18: warning: variable ‘n’ set but not used [-Wunused-but-set-variable] 107 | auto n = recv_multipart(sock, std::back_inserter(msgs)); | ^ CMQMaster.h:109:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 109 | } while(data_offset >= msgs.size()); | ~~~~~~~~~~~~^~~~~~~~~~~~~~ CMQMaster.h: In member function ‘void CMQMaster::proxy_submit_cmd(SEXP, int)’: CMQMaster.h:152:14: warning: variable ‘n’ set but not used [-Wunused-but-set-variable] 152 | auto n = recv_multipart(sock, std::back_inserter(msgs)); | ^ CMQMaster.h: In member function ‘int CMQMaster::register_peer(std::vector&)’: CMQMaster.h:341:25: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 341 | if (msgs.size() > ++cur_i) { | ~~~~~~~~~~~~^~~~~~~~~ CMQMaster.h:356:26: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, CMQMaster::worker_t>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 356 | if (peers.size() > prev_size && w.status == wlife_t::active) { | ~~~~~~~~~~~~~^~~~~~~~~~~ CMQMaster.h:361:25: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 361 | if (msgs.size() > cur_i+2) { | ~~~~~~~~~~~~^~~~~~~~~ CMQProxy.h: In member function ‘SEXPREC* CMQProxy::proxy_receive_cmd()’: CMQProxy.h:54:14: warning: variable ‘n’ set but not used [-Wunused-but-set-variable] 54 | auto n = recv_multipart(to_master, std::back_inserter(msgs)); | ^ CMQProxy.h:55:14: warning: unused variable ‘status’ [-Wunused-variable] 55 | auto status = msg2wlife_t(msgs[1]); | ^~~~~~ CMQProxy.h: In member function ‘bool CMQProxy::process_one()’: CMQProxy.h:116:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 116 | for (int i=0; i::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 139 | for (int i=0; i::operator_mmap(std::size_t, std::size_t) [with T = Rcomplex; B = double; std::size_t = long unsigned int]’: load.cpp:543:19: required from ‘void FARRSubsetter::operator()(std::size_t, std::size_t) [with T = Rcomplex; B = double; std::size_t = long unsigned int]’ 543 | this->operator_mmap(begin, end); | ~~~~~~^~~~~~~~~~~~~ load.cpp:540:10: required from here 540 | void operator()(std::size_t begin, std::size_t end) { | ^~~~~~~~ load.cpp:342:37: warning: comparison of integer expressions of different signedness: ‘R_xlen_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 342 | for(R_xlen_t ii = begin; ii < end; ii++){ | ~~~^~~~~ load.cpp: In instantiation of ‘void FARRSubsetter::operator_fread(std::size_t, std::size_t) [with T = Rcomplex; B = double; std::size_t = long unsigned int]’: load.cpp:545:19: required from ‘void FARRSubsetter::operator()(std::size_t, std::size_t) [with T = Rcomplex; B = double; std::size_t = long unsigned int]’ 545 | this->operator_fread(begin, end); | ~~~~~~^~~~~~~~~~~~~~ load.cpp:540:10: required from here 540 | void operator()(std::size_t begin, std::size_t end) { | ^~~~~~~~ load.cpp:443:37: warning: comparison of integer expressions of different signedness: ‘R_xlen_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 443 | for(R_xlen_t ii = begin; ii < end; ii++){ | ~~~^~~~~ load.cpp: In instantiation of ‘void FARRSubsetter::operator_mmap(std::size_t, std::size_t) [with T = int; B = unsigned char; std::size_t = long unsigned int]’: load.cpp:543:19: required from ‘void FARRSubsetter::operator()(std::size_t, std::size_t) [with T = int; B = unsigned char; std::size_t = long unsigned int]’ 543 | this->operator_mmap(begin, end); | ~~~~~~^~~~~~~~~~~~~ load.cpp:540:10: required from here 540 | void operator()(std::size_t begin, std::size_t end) { | ^~~~~~~~ load.cpp:342:37: warning: comparison of integer expressions of different signedness: ‘R_xlen_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 342 | for(R_xlen_t ii = begin; ii < end; ii++){ | ~~~^~~~~ load.cpp: In instantiation of ‘void FARRSubsetter::operator_fread(std::size_t, std::size_t) [with T = int; B = unsigned char; std::size_t = long unsigned int]’: load.cpp:545:19: required from ‘void FARRSubsetter::operator()(std::size_t, std::size_t) [with T = int; B = unsigned char; std::size_t = long unsigned int]’ 545 | this->operator_fread(begin, end); | ~~~~~~^~~~~~~~~~~~~~ load.cpp:540:10: required from here 540 | void operator()(std::size_t begin, std::size_t end) { | ^~~~~~~~ load.cpp:443:37: warning: comparison of integer expressions of different signedness: ‘R_xlen_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 443 | for(R_xlen_t ii = begin; ii < end; ii++){ | ~~~^~~~~ load.cpp: In instantiation of ‘void FARRSubsetter::operator_mmap(std::size_t, std::size_t) [with T = unsigned char; B = unsigned char; std::size_t = long unsigned int]’: load.cpp:543:19: required from ‘void FARRSubsetter::operator()(std::size_t, std::size_t) [with T = unsigned char; B = unsigned char; std::size_t = long unsigned int]’ 543 | this->operator_mmap(begin, end); | ~~~~~~^~~~~~~~~~~~~ load.cpp:540:10: required from here 540 | void operator()(std::size_t begin, std::size_t end) { | ^~~~~~~~ load.cpp:342:37: warning: comparison of integer expressions of different signedness: ‘R_xlen_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 342 | for(R_xlen_t ii = begin; ii < end; ii++){ | ~~~^~~~~ load.cpp: In instantiation of ‘void FARRSubsetter::operator_fread(std::size_t, std::size_t) [with T = unsigned char; B = unsigned char; std::size_t = long unsigned int]’: load.cpp:545:19: required from ‘void FARRSubsetter::operator()(std::size_t, std::size_t) [with T = unsigned char; B = unsigned char; std::size_t = long unsigned int]’ 545 | this->operator_fread(begin, end); | ~~~~~~^~~~~~~~~~~~~~ load.cpp:540:10: required from here 540 | void operator()(std::size_t begin, std::size_t end) { | ^~~~~~~~ load.cpp:443:37: warning: comparison of integer expressions of different signedness: ‘R_xlen_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 443 | for(R_xlen_t ii = begin; ii < end; ii++){ | ~~~^~~~~ load.cpp: In instantiation of ‘void FARRSubsetter::operator_mmap(std::size_t, std::size_t) [with T = double; B = float; std::size_t = long unsigned int]’: load.cpp:543:19: required from ‘void FARRSubsetter::operator()(std::size_t, std::size_t) [with T = double; B = float; std::size_t = long unsigned int]’ 543 | this->operator_mmap(begin, end); | ~~~~~~^~~~~~~~~~~~~ load.cpp:540:10: required from here 540 | void operator()(std::size_t begin, std::size_t end) { | ^~~~~~~~ load.cpp:342:37: warning: comparison of integer expressions of different signedness: ‘R_xlen_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 342 | for(R_xlen_t ii = begin; ii < end; ii++){ | ~~~^~~~~ load.cpp: In instantiation of ‘void FARRSubsetter::operator_fread(std::size_t, std::size_t) [with T = double; B = float; std::size_t = long unsigned int]’: load.cpp:545:19: required from ‘void FARRSubsetter::operator()(std::size_t, std::size_t) [with T = double; B = float; std::size_t = long unsigned int]’ 545 | this->operator_fread(begin, end); | ~~~~~~^~~~~~~~~~~~~~ load.cpp:540:10: required from here 540 | void operator()(std::size_t begin, std::size_t end) { | ^~~~~~~~ load.cpp:443:37: warning: comparison of integer expressions of different signedness: ‘R_xlen_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 443 | for(R_xlen_t ii = begin; ii < end; ii++){ | ~~~^~~~~ load.cpp: In instantiation of ‘void FARRSubsetter::operator_mmap(std::size_t, std::size_t) [with T = double; B = double; std::size_t = long unsigned int]’: load.cpp:543:19: required from ‘void FARRSubsetter::operator()(std::size_t, std::size_t) [with T = double; B = double; std::size_t = long unsigned int]’ 543 | this->operator_mmap(begin, end); | ~~~~~~^~~~~~~~~~~~~ load.cpp:540:10: required from here 540 | void operator()(std::size_t begin, std::size_t end) { | ^~~~~~~~ load.cpp:342:37: warning: comparison of integer expressions of different signedness: ‘R_xlen_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 342 | for(R_xlen_t ii = begin; ii < end; ii++){ | ~~~^~~~~ load.cpp: In instantiation of ‘void FARRSubsetter::operator_fread(std::size_t, std::size_t) [with T = double; B = double; std::size_t = long unsigned int]’: load.cpp:545:19: required from ‘void FARRSubsetter::operator()(std::size_t, std::size_t) [with T = double; B = double; std::size_t = long unsigned int]’ 545 | this->operator_fread(begin, end); | ~~~~~~^~~~~~~~~~~~~~ load.cpp:540:10: required from here 540 | void operator()(std::size_t begin, std::size_t end) { | ^~~~~~~~ load.cpp:443:37: warning: comparison of integer expressions of different signedness: ‘R_xlen_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 443 | for(R_xlen_t ii = begin; ii < end; ii++){ | ~~~^~~~~ load.cpp: In instantiation of ‘void FARRSubsetter::operator_mmap(std::size_t, std::size_t) [with T = int; B = int; std::size_t = long unsigned int]’: load.cpp:543:19: required from ‘void FARRSubsetter::operator()(std::size_t, std::size_t) [with T = int; B = int; std::size_t = long unsigned int]’ 543 | this->operator_mmap(begin, end); | ~~~~~~^~~~~~~~~~~~~ load.cpp:540:10: required from here 540 | void operator()(std::size_t begin, std::size_t end) { | ^~~~~~~~ load.cpp:342:37: warning: comparison of integer expressions of different signedness: ‘R_xlen_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 342 | for(R_xlen_t ii = begin; ii < end; ii++){ | ~~~^~~~~ load.cpp: In instantiation of ‘void FARRSubsetter::operator_fread(std::size_t, std::size_t) [with T = int; B = int; std::size_t = long unsigned int]’: load.cpp:545:19: required from ‘void FARRSubsetter::operator()(std::size_t, std::size_t) [with T = int; B = int; std::size_t = long unsigned int]’ 545 | this->operator_fread(begin, end); | ~~~~~~^~~~~~~~~~~~~~ load.cpp:540:10: required from here 540 | void operator()(std::size_t begin, std::size_t end) { | ^~~~~~~~ load.cpp:443:37: warning: comparison of integer expressions of different signedness: ‘R_xlen_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 443 | for(R_xlen_t ii = begin; ii < end; ii++){ | ~~~^~~~~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c map.cpp -o map.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c mapreduce.cpp -o mapreduce.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c save.cpp -o save.o save.cpp: In instantiation of ‘void FARRAssigner::operator()(std::size_t, std::size_t) [with T = unsigned char; std::size_t = long unsigned int]’: save.cpp:358:10: required from here 358 | void operator()(std::size_t begin, std::size_t end) { | ^~~~~~~~ save.cpp:364:41: warning: comparison of integer expressions of different signedness: ‘R_xlen_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 364 | for(R_xlen_t iter = begin; iter < end; iter++){ | ~~~~~^~~~~ save.cpp: In instantiation of ‘void FARRAssigner::operator()(std::size_t, std::size_t) [with T = float; std::size_t = long unsigned int]’: save.cpp:358:10: required from here 358 | void operator()(std::size_t begin, std::size_t end) { | ^~~~~~~~ save.cpp:364:41: warning: comparison of integer expressions of different signedness: ‘R_xlen_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 364 | for(R_xlen_t iter = begin; iter < end; iter++){ | ~~~~~^~~~~ save.cpp: In instantiation of ‘void FARRAssigner::operator()(std::size_t, std::size_t) [with T = double; std::size_t = long unsigned int]’: save.cpp:358:10: required from here 358 | void operator()(std::size_t begin, std::size_t end) { | ^~~~~~~~ save.cpp:364:41: warning: comparison of integer expressions of different signedness: ‘R_xlen_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 364 | for(R_xlen_t iter = begin; iter < end; iter++){ | ~~~~~^~~~~ save.cpp: In instantiation of ‘void FARRAssigner::operator()(std::size_t, std::size_t) [with T = int; std::size_t = long unsigned int]’: save.cpp:358:10: required from here 358 | void operator()(std::size_t begin, std::size_t end) { | ^~~~~~~~ save.cpp:364:41: warning: comparison of integer expressions of different signedness: ‘R_xlen_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 364 | for(R_xlen_t iter = begin; iter < end; iter++){ | ~~~~~^~~~~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c serialize.cpp -o serialize.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c threadSettings.cpp -o threadSettings.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c utils.cpp -o utils.o utils.cpp: In function ‘void set_buffer(SEXP, int, size_t, int)’: utils.cpp:42:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 42 | if( buf_bytes > buffer_bytes ){ | ~~~~~~~~~~^~~~~~~~~~~~~~ g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o filearray.so RcppExports.o collapse.o conversion.o core.o interfaces.o load.o map.o mapreduce.o save.o serialize.o threadSettings.o utils.o -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpbXU3RA/R.INSTALL418db5c759b9b/filearray/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-filearray/00new/filearray/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (filearray) begin installing package ‘ieegio’ * installing *source* package ‘threeBrain’ ... ** this is package ‘threeBrain’ version ‘1.2.0’ ** package ‘threeBrain’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (threeBrain) * installing *source* package ‘ieegio’ ... ** this is package ‘ieegio’ version ‘0.0.5’ ** package ‘ieegio’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ieegio) * installing *source* package ‘gdalraster’ ... ** this is package ‘gdalraster’ version ‘2.2.1’ ** package ‘gdalraster’ successfully unpacked and MD5 sums checked ** using staged installation configure: CC: gcc-15 configure: CXX: g++-15 -std=gnu++17 checking for gdal-config... /usr/bin/gdal-config checking gdal-config usability... yes configure: GDAL: 3.11.3 checking GDAL version >= 3.1.0... yes checking GDAL version != 3.6.0... yes checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C++... yes checking whether g++-15 -std=gnu++17 accepts -g... yes checking for g++-15 -std=gnu++17 option to enable C++11 features... none needed checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for gdal.h... yes checking GDAL: linking with --libs only... yes checking GDAL: checking whether GEOS is available at runtime:... yes configure: pkg-config proj exists, will use it configure: PROJ data directory: /usr/share/proj checking GDAL: checking whether PROJ is available at runtime:... yes configure: Package CPP flags: -I/usr/include/gdal configure: Package LIBS: -L/usr/lib/x86_64-linux-gnu -lgdal configure: creating ./config.status config.status: creating src/Makevars ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-3) 15.2.0’ using C++17 make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpLYTqms/R.INSTALL427ab693677f4/gdalraster/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/include/gdal -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/nanoarrow/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/tmp/CRAN_recheck/Library/RcppInt64/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/include/gdal -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/nanoarrow/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/tmp/CRAN_recheck/Library/RcppInt64/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c cmb_table.cpp -o cmb_table.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/include/gdal -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/nanoarrow/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/tmp/CRAN_recheck/Library/RcppInt64/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c gdal_dt.cpp -o gdal_dt.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/include/gdal -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/nanoarrow/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/tmp/CRAN_recheck/Library/RcppInt64/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c gdal_exp.cpp -o gdal_exp.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/include/gdal -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/nanoarrow/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/tmp/CRAN_recheck/Library/RcppInt64/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c gdal_vsi.cpp -o gdal_vsi.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/include/gdal -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/nanoarrow/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/tmp/CRAN_recheck/Library/RcppInt64/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c gdalalg.cpp -o gdalalg.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/include/gdal -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/nanoarrow/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/tmp/CRAN_recheck/Library/RcppInt64/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c gdalraster.cpp -o gdalraster.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/include/gdal -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/nanoarrow/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/tmp/CRAN_recheck/Library/RcppInt64/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c gdalvector.cpp -o gdalvector.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/include/gdal -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/nanoarrow/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/tmp/CRAN_recheck/Library/RcppInt64/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c geom_api.cpp -o geom_api.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/include/gdal -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/nanoarrow/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/tmp/CRAN_recheck/Library/RcppInt64/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c ogr_util.cpp -o ogr_util.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/include/gdal -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/nanoarrow/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/tmp/CRAN_recheck/Library/RcppInt64/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c progress_r.cpp -o progress_r.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/include/gdal -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/nanoarrow/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/tmp/CRAN_recheck/Library/RcppInt64/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c rcpp_util.cpp -o rcpp_util.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/include/gdal -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/nanoarrow/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/tmp/CRAN_recheck/Library/RcppInt64/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c running_stats.cpp -o running_stats.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/include/gdal -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/nanoarrow/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/tmp/CRAN_recheck/Library/RcppInt64/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c srs_api.cpp -o srs_api.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/include/gdal -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/nanoarrow/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/tmp/CRAN_recheck/Library/RcppInt64/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c transform.cpp -o transform.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/include/gdal -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/nanoarrow/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/tmp/CRAN_recheck/Library/RcppInt64/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c vsifile.cpp -o vsifile.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o gdalraster.so RcppExports.o cmb_table.o gdal_dt.o gdal_exp.o gdal_vsi.o gdalalg.o gdalraster.o gdalvector.o geom_api.o ogr_util.o progress_r.o rcpp_util.o running_stats.o srs_api.o transform.o vsifile.o -L/usr/lib/x86_64-linux-gnu -lgdal -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpLYTqms/R.INSTALL427ab693677f4/gdalraster/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-gdalraster/00new/gdalraster/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (gdalraster) * installing *source* package ‘dggridR’ ... ** this is package ‘dggridR’ version ‘3.1.0’ ** package ‘dggridR’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-3) 15.2.0’ using C++ compiler: ‘g++-15 (Debian 15.2.0-3) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpUsJgrj/R.INSTALL4226c70d102e5/dggridR/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgAddressBase.cpp -o DgAddressBase.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgApSeq.cpp -o DgApSeq.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgBase.cpp -o DgBase.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgBoundedHexC2RF2D.cpp -o DgBoundedHexC2RF2D.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgBoundedHexC3C2RF2D.cpp -o DgBoundedHexC3C2RF2D.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgBoundedHexC3RF2D.cpp -o DgBoundedHexC3RF2D.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgBoundedIDGG.cpp -o DgBoundedIDGG.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgBoundedIDGGS.cpp -o DgBoundedIDGGS.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgBoundedRF2D.cpp -o DgBoundedRF2D.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgBoundedRFBase0.cpp -o DgBoundedRFBase0.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgBoundedRFS2D.cpp -o DgBoundedRFS2D.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgCell.cpp -o DgCell.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgColor.cpp -o DgColor.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgConverterBase.cpp -o DgConverterBase.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgDVec2D.cpp -o DgDVec2D.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgDVec3D.cpp -o DgDVec3D.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgDiscRFS2D.cpp -o DgDiscRFS2D.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgDistanceBase.cpp -o DgDistanceBase.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgDmdD4Grid2D.cpp -o DgDmdD4Grid2D.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgDmdD4Grid2DS.cpp -o DgDmdD4Grid2DS.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgDmdD8Grid2D.cpp -o DgDmdD8Grid2D.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgDmdD8Grid2DS.cpp -o DgDmdD8Grid2DS.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgDmdIDGG.cpp -o DgDmdIDGG.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgEllipsoidRF.cpp -o DgEllipsoidRF.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgGeoSphRF.cpp -o DgGeoSphRF.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgGridTopo.cpp -o DgGridTopo.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgHexC1Grid2D.cpp -o DgHexC1Grid2D.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgHexC2Grid2D.cpp -o DgHexC2Grid2D.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgHexC3Grid2D.cpp -o DgHexC3Grid2D.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgHexGrid2DS.cpp -o DgHexGrid2DS.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgHexIDGG.cpp -o DgHexIDGG.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgHexIDGGS.cpp -o DgHexIDGGS.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgIDGG.cpp -o DgIDGG.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgIDGGBase.cpp -o DgIDGGBase.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgIDGGS.cpp -o DgIDGGS.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgIDGGS3H.cpp -o DgIDGGS3H.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgIDGGS43H.cpp -o DgIDGGS43H.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgIDGGS4D.cpp -o DgIDGGS4D.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgIDGGS4H.cpp -o DgIDGGS4H.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgIDGGS4T.cpp -o DgIDGGS4T.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgIDGGSBase.cpp -o DgIDGGSBase.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgIDGGutil.cpp -o DgIDGGutil.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgIVec2D.cpp -o DgIVec2D.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgIVec3D.cpp -o DgIVec3D.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgIcosaMap.cpp -o DgIcosaMap.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgInAIGenFile.cpp -o DgInAIGenFile.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgInGDALFile.cpp -o DgInGDALFile.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgInLocTextFile.cpp -o DgInLocTextFile.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgInShapefile.cpp -o DgInShapefile.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgInShapefileAtt.cpp -o DgInShapefileAtt.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgInputStream.cpp -o DgInputStream.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgLocBase.cpp -o DgLocBase.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgLocList.cpp -o DgLocList.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgLocVector.cpp -o DgLocVector.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgLocation.cpp -o DgLocation.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgOutAIGenFile.cpp -o DgOutAIGenFile.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgOutChildrenFile.cpp -o DgOutChildrenFile.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgOutGdalFile.cpp -o DgOutGdalFile.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgOutGeoJSONFile.cpp -o DgOutGeoJSONFile.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgOutKMLfile.cpp -o DgOutKMLfile.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgOutLocFile.cpp -o DgOutLocFile.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgOutLocTextFile.cpp -o DgOutLocTextFile.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgOutNeighborsFile.cpp -o DgOutNeighborsFile.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgOutPRCellsFile.cpp -o DgOutPRCellsFile.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgOutPRPtsFile.cpp -o DgOutPRPtsFile.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgOutPtsText.cpp -o DgOutPtsText.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgOutRandPtsText.cpp -o DgOutRandPtsText.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgOutShapefile.cpp -o DgOutShapefile.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgOutputStream.cpp -o DgOutputStream.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgParamList.cpp -o DgParamList.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgPolygon.cpp -o DgPolygon.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgProjFuller.cpp -o DgProjFuller.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgProjGnomonicRF.cpp -o DgProjGnomonicRF.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgProjISEA.cpp -o DgProjISEA.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgProjTriRF.cpp -o DgProjTriRF.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgRFBase.cpp -o DgRFBase.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgRFNetwork.cpp -o DgRFNetwork.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgRandom.cpp -o DgRandom.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgSeriesConverter.cpp -o DgSeriesConverter.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgSqrD4Grid2D.cpp -o DgSqrD4Grid2D.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgSqrD4Grid2DS.cpp -o DgSqrD4Grid2DS.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgSqrD8Grid2D.cpp -o DgSqrD8Grid2D.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgSqrD8Grid2DS.cpp -o DgSqrD8Grid2DS.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgSuperfund.cpp -o DgSuperfund.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgTriGrid2D.cpp -o DgTriGrid2D.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgTriGrid2DS.cpp -o DgTriGrid2DS.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgTriIDGG.cpp -o DgTriIDGG.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DgUtil.cpp -o DgUtil.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Rwrapper.cpp -o Rwrapper.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c adjlon.cpp -o adjlon.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c dbfopen.c -o dbfopen.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c dglib.cpp -o dglib.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c pj_auth.cpp -o pj_auth.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c pj_mlfn.cpp -o pj_mlfn.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c pj_msfn.cpp -o pj_msfn.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c pj_phi2.cpp -o pj_phi2.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c pj_qsfn.cpp -o pj_qsfn.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c pj_tsfn.cpp -o pj_tsfn.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c safileio.c -o safileio.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c sbnsearch.c -o sbnsearch.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c shpopen.c -o shpopen.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c shptree.c -o shptree.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c shputils.c -o shputils.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c test.cpp -o test.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c util.cpp -o util.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o dggridR.so DgAddressBase.o DgApSeq.o DgBase.o DgBoundedHexC2RF2D.o DgBoundedHexC3C2RF2D.o DgBoundedHexC3RF2D.o DgBoundedIDGG.o DgBoundedIDGGS.o DgBoundedRF2D.o DgBoundedRFBase0.o DgBoundedRFS2D.o DgCell.o DgColor.o DgConverterBase.o DgDVec2D.o DgDVec3D.o DgDiscRFS2D.o DgDistanceBase.o DgDmdD4Grid2D.o DgDmdD4Grid2DS.o DgDmdD8Grid2D.o DgDmdD8Grid2DS.o DgDmdIDGG.o DgEllipsoidRF.o DgGeoSphRF.o DgGridTopo.o DgHexC1Grid2D.o DgHexC2Grid2D.o DgHexC3Grid2D.o DgHexGrid2DS.o DgHexIDGG.o DgHexIDGGS.o DgIDGG.o DgIDGGBase.o DgIDGGS.o DgIDGGS3H.o DgIDGGS43H.o DgIDGGS4D.o DgIDGGS4H.o DgIDGGS4T.o DgIDGGSBase.o DgIDGGutil.o DgIVec2D.o DgIVec3D.o DgIcosaMap.o DgInAIGenFile.o DgInGDALFile.o DgInLocTextFile.o DgInShapefile.o DgInShapefileAtt.o DgInputStream.o DgLocBase.o DgLocList.o DgLocVector.o DgLocation.o DgOutAIGenFile.o DgOutChildrenFile.o DgOutGdalFile.o DgOutGeoJSONFile.o DgOutKMLfile.o DgOutLocFile.o DgOutLocTextFile.o DgOutNeighborsFile.o DgOutPRCellsFile.o DgOutPRPtsFile.o DgOutPtsText.o DgOutRandPtsText.o DgOutShapefile.o DgOutputStream.o DgParamList.o DgPolygon.o DgProjFuller.o DgProjGnomonicRF.o DgProjISEA.o DgProjTriRF.o DgRFBase.o DgRFNetwork.o DgRandom.o DgSeriesConverter.o DgSqrD4Grid2D.o DgSqrD4Grid2DS.o DgSqrD8Grid2D.o DgSqrD8Grid2DS.o DgSuperfund.o DgTriGrid2D.o DgTriGrid2DS.o DgTriIDGG.o DgUtil.o RcppExports.o Rwrapper.o adjlon.o dbfopen.o dglib.o pj_auth.o pj_mlfn.o pj_msfn.o pj_phi2.o pj_qsfn.o pj_tsfn.o safileio.o sbnsearch.o shpopen.o shptree.o shputils.o test.o util.o -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpUsJgrj/R.INSTALL4226c70d102e5/dggridR/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-dggridR/00new/dggridR/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (dggridR) checking targets_1.11.4.tar.gz ... checking gittargets_0.0.7.tar.gz ... checking geotargets_0.3.1.tar.gz ... checking jagstargets_1.2.2.tar.gz ... checking ravepipeline_0.0.3.tar.gz ... checking sqltargets_0.2.1.tar.gz ... checking tarchetypes_0.13.1.tar.gz ... checking tarchives_0.1.1.tar.gz ... checking data.validator_0.2.1.tar.gz ... checking chopin_0.9.9.tar.gz ... checking knitr_1.50.tar.gz ... checking repana_2.2.1.tar.gz ... checking worcs_0.1.19.tar.gz ... Depends: Package: targets Depends: R (>= 3.5.0) Imports: base64url (>= 1.4), callr (>= 3.7.0), cli (>= 2.0.2), codetools (>= 0.2.16), data.table (>= 1.16.0), igraph (>= 2.0.0), knitr (>= 1.34), prettyunits (>= 1.1.0), ps (>= 1.8.0), R6 (>= 2.4.1), rlang (>= 1.0.0), secretbase (>= 0.5.0), stats, tibble (>= 3.0.1), tidyselect (>= 1.1.0), tools, utils, vctrs (>= 0.2.4), yaml (>= 2.2.1) Timings: user system elapsed targets 152.92 9.384 178.017 Results: Check status summary: OK Source packages 1 Reverse depends 12 Check results summary: targets ... OK rdepends_chopin ... OK rdepends_data.validator ... OK rdepends_geotargets ... OK rdepends_gittargets ... OK rdepends_jagstargets ... OK rdepends_knitr ... OK rdepends_ravepipeline ... OK rdepends_repana ... OK rdepends_sqltargets ... OK rdepends_tarchetypes ... OK rdepends_tarchives ... OK rdepends_worcs ... OK Check results changes: Package: knitr Check: DESCRIPTION meta-information Old result: NOTE New result: OK