* using log directory 'd:/RCompile/CRANincoming/R-devel/tableParser.Rcheck' * using R Under development (unstable) (2026-01-16 r89305 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 14.3.0 GNU Fortran (GCC) 14.3.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'tableParser/DESCRIPTION' ... OK * this is package 'tableParser' version '1.0.1' * package encoding: UTF-8 * checking CRAN incoming feasibility ... NOTE Maintainer: 'Ingmar Böschen ' New submission Possibly misspelled words in DESCRIPTION: DOCX (8:124) HML (8:114) JATS (8:79) JATSdecoder (8:932) NISO (8:74) tabulapdf (8:315) * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'tableParser' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking for future file timestamps ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [25s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking examples ... ERROR Running examples in 'tableParser-Ex.R' failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: guessCaptionFootnote > ### Title: guessCaptionFootnote > ### Aliases: guessCaptionFootnote > > ### ** Examples > > ## Download an example DOCX file from tableParser's github repo to temp directory > d<-'https://github.com/ingmarboeschen/tableParser/raw/refs/heads/main/tableExamples.docx' > download.file(d,paste0(tempdir(),"/","tableExamples.docx")) trying URL 'https://github.com/ingmarboeschen/tableParser/raw/refs/heads/main/tableExamples.docx' Content type 'application/octet-stream' length 9048 bytes ================================================== downloaded 9048 bytes > > ## Download an example HTML file from tableParser's github repo to temp directory > h<-'https://github.com/ingmarboeschen/tableParser/raw/refs/heads/main/tableExamples.html' > download.file(h,paste0(tempdir(),"/","tableExamples.html")) trying URL 'https://github.com/ingmarboeschen/tableParser/raw/refs/heads/main/tableExamples.html' Content type 'text/plain; charset=utf-8' length 50013 bytes (48 KB) ================================================== downloaded 48 KB > > ## Extract table captions and footnotes > # DOCX file > guessCaptionFootnote(paste0(tempdir(),"/","tableExamples.docx")) Warning in utils::unzip(tempZip, "word/document.xml", exdir = tempdir()) : zip file is corrupt Error in file(con, "r") : invalid 'description' argument Calls: guessCaptionFootnote -> readLines -> file Execution halted * checking PDF version of manual ... [19s] OK * checking HTML version of manual ... OK * DONE Status: 1 ERROR, 1 NOTE