* using log directory ‘/srv/hornik/tmp/CRAN/synthesis.Rcheck’ * using R Under development (unstable) (2024-06-27 r86848) * using platform: x86_64-pc-linux-gnu * R was compiled by Debian clang version 18.1.8 (1) Debian flang-new version 18.1.8 (1) * running under: Debian GNU/Linux trixie/sid * using session charset: UTF-8 * checking for file ‘synthesis/DESCRIPTION’ ... OK * this is package ‘synthesis’ version ‘1.2.5’ * package encoding: UTF-8 * checking CRAN incoming feasibility ... [4s/5s] NOTE Maintainer: ‘Ze Jiang ’ New submission Package was archived on CRAN Possibly misspelled words in DESCRIPTION: Jiang (12:181, 12:267, 12:377) Rashid (12:388) Sharma (12:192, 12:278, 12:418) CRAN repository db overrides: X-CRAN-Comment: Archived on 2024-06-27 as issues were not corrected in time. Resubmission still Suggests: NPRED Suggests or Enhances not in mainstream repositories: WASP * checking package namespace information ... OK * checking package dependencies ... NOTE Package suggested but not available for checking: ‘WASP’ * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘synthesis’ can be installed ... [1s/1s] OK * checking package directory ... OK * checking for future file timestamps ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [0s/0s] OK * checking whether the package can be loaded with stated dependencies ... [0s/0s] OK * checking whether the package can be unloaded cleanly ... [0s/0s] OK * checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK * checking whether the namespace can be unloaded cleanly ... [0s/0s] OK * checking loading without being on the library search path ... [0s/0s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [3s/3s] OK * checking Rd files ... [0s/0s] OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... [1s/1s] OK * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... [0s/0s] OK Running ‘testthat.R’ [0s/0s] * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [321s/314s] ERROR Error(s) in re-building vignettes: ... --- re-building ‘synthesis.Rmd’ using rmarkdown * installing *source* package ‘colorspace’ ... ** package ‘colorspace’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 18.1.8 (1)’ clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c colorspace.c -o colorspace.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-18 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o colorspace.so colorspace.o init.o -L/home/hornik/tmp/R/lib -lR installing to /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/00LOCK-colorspace/00new/colorspace/libs ** R ** data *** moving datasets to lazyload DB ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (colorspace) * installing *source* package ‘viridisLite’ ... ** package ‘viridisLite’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (viridisLite) * installing *source* package ‘RColorBrewer’ ... ** package ‘RColorBrewer’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (RColorBrewer) * installing *source* package ‘labeling’ ... ** package ‘labeling’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (labeling) * installing *source* package ‘farver’ ... ** package ‘farver’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Debian clang version 18.1.8 (1)’ clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c ColorSpace.cpp -o ColorSpace.o ColorSpace.cpp:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 4 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c Comparison.cpp -o Comparison.o clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c Conversion.cpp -o Conversion.o Conversion.cpp:8:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 8 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c encode.cpp -o encode.o In file included from encode.cpp:1: ./encode.h:8:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 8 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c farver.cpp -o farver.o In file included from farver.cpp:1: ./farver.h:6:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 6 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c init.cpp -o init.o In file included from init.cpp:1: ./farver.h:6:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 6 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o farver.so ColorSpace.o Comparison.o Conversion.o encode.o farver.o init.o -L/home/hornik/tmp/R/lib -lR installing to /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/00LOCK-farver/00new/farver/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (farver) * installing *source* package ‘timechange’ ... ** package ‘timechange’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 18.1.8 (1)’ using C++ compiler: ‘Debian clang version 18.1.8 (1)’ clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I. -I./cctz/src/ -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c common.cpp -o common.o In file included from common.cpp:2: In file included from ./common.h:14: In file included from ./tzone.h:8: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11.hpp:3: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I. -I./cctz/src/ -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c cpp11.cpp -o cpp11.o In file included from cpp11.cpp:5: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/declarations.hpp:13: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11.hpp:3: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I. -I./cctz/src/ -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c get.cpp -o get.o In file included from get.cpp:2: In file included from ./common.h:14: In file included from ./tzone.h:8: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11.hpp:3: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I. -I./cctz/src/ -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c parse.c -o parse.o clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I. -I./cctz/src/ -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c round.cpp -o round.o In file included from round.cpp:4: In file included from ./common.h:14: In file included from ./tzone.h:8: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11.hpp:3: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I. -I./cctz/src/ -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c tzone.cpp -o tzone.o In file included from tzone.cpp:2: In file included from ./tzone.h:8: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11.hpp:3: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I. -I./cctz/src/ -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c update.cpp -o update.o In file included from update.cpp:17: In file included from ./common.h:14: In file included from ./tzone.h:8: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11.hpp:3: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I. -I./cctz/src/ -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c cctz/src/time_zone_fixed.cc -o cctz/src/time_zone_fixed.o clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I. -I./cctz/src/ -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c cctz/src/time_zone_if.cc -o cctz/src/time_zone_if.o clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I. -I./cctz/src/ -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c cctz/src/time_zone_impl.cc -o cctz/src/time_zone_impl.o clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I. -I./cctz/src/ -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c cctz/src/time_zone_info.cc -o cctz/src/time_zone_info.o clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I. -I./cctz/src/ -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c cctz/src/time_zone_libc.cc -o cctz/src/time_zone_libc.o clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I. -I./cctz/src/ -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c cctz/src/time_zone_lookup.cc -o cctz/src/time_zone_lookup.o clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I. -I./cctz/src/ -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c cctz/src/time_zone_posix.cc -o cctz/src/time_zone_posix.o clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I. -I./cctz/src/ -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c cctz/src/zone_info_source.cc -o cctz/src/zone_info_source.o ar rcs libcctz.a ./cctz/src/time_zone_fixed.o ./cctz/src/time_zone_if.o ./cctz/src/time_zone_impl.o ./cctz/src/time_zone_info.o ./cctz/src/time_zone_libc.o ./cctz/src/time_zone_lookup.o ./cctz/src/time_zone_posix.o ./cctz/src/zone_info_source.o clang++-18 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o timechange.so common.o cpp11.o get.o parse.o round.o tzone.o update.o -L. -lcctz -L/home/hornik/tmp/R/lib -lR installing to /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/00LOCK-timechange/00new/timechange/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (timechange) * installing *source* package ‘generics’ ... ** package ‘generics’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (generics) * installing *source* package ‘backports’ ... ** package ‘backports’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 18.1.8 (1)’ clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c dotsElt.c -o dotsElt.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c dotsLength.c -o dotsLength.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c dotsNames.c -o dotsNames.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-18 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o backports.so dotsElt.o dotsLength.o dotsNames.o init.o -L/home/hornik/tmp/R/lib -lR installing to /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/00LOCK-backports/00new/backports/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (backports) * installing *source* package ‘isoband’ ... ** package ‘isoband’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Debian clang version 18.1.8 (1)’ using C++11 clang++-18 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-error=enum-constexpr-conversion -DR_NO_REMAP -c clip-lines.cpp -o clip-lines.o clip-lines.cpp:1:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 1 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-error=enum-constexpr-conversion -DR_NO_REMAP -c init.cpp -o init.o clang++-18 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-error=enum-constexpr-conversion -DR_NO_REMAP -c isoband.cpp -o isoband.o isoband.cpp:6:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 6 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-error=enum-constexpr-conversion -DR_NO_REMAP -c polygon.cpp -o polygon.o clang++-18 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-error=enum-constexpr-conversion -DR_NO_REMAP -c separate-polygons.cpp -o separate-polygons.o separate-polygons.cpp:1:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 1 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-error=enum-constexpr-conversion -DR_NO_REMAP -c test-clip-lines.cpp -o test-clip-lines.o clang++-18 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-error=enum-constexpr-conversion -DR_NO_REMAP -c test-runner.cpp -o test-runner.o clang++-18 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-error=enum-constexpr-conversion -DR_NO_REMAP -c test-separate-polygons.cpp -o test-separate-polygons.o clang++-18 -std=gnu++11 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o isoband.so clip-lines.o init.o isoband.o polygon.o separate-polygons.o test-clip-lines.o test-runner.o test-separate-polygons.o -L/home/hornik/tmp/R/lib -lR installing to /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/00LOCK-isoband/00new/isoband/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (isoband) * installing *source* package ‘gtable’ ... ** package ‘gtable’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (gtable) * installing *source* package ‘plyr’ ... ** package ‘plyr’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 18.1.8 (1)’ using C++ compiler: ‘Debian clang version 18.1.8 (1)’ clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o In file included from RcppExports.cpp:4: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/Rcpp/include/Rcpp.h:27: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/Rcpp/include/RcppCommon.h:30: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/Rcpp/include/Rcpp/r/headers.h:26:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 26 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c loop_apply.c -o loop_apply.o clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c split-numeric.cpp -o split-numeric.o In file included from split-numeric.cpp:1: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/Rcpp/include/Rcpp.h:27: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/Rcpp/include/RcppCommon.h:30: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/Rcpp/include/Rcpp/r/headers.h:26:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 26 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o plyr.so RcppExports.o loop_apply.o split-numeric.o -L/home/hornik/tmp/R/lib -lR installing to /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/00LOCK-plyr/00new/plyr/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (plyr) * installing *source* package ‘RcppArmadillo’ ... ** package ‘RcppArmadillo’ successfully unpacked and MD5 sums checked ** using staged installation checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C++... yes checking whether clang++-18 -std=gnu++17 accepts -g... yes checking for clang++-18 -std=gnu++17 option to enable C++11 features... none needed checking how to run the C++ preprocessor... clang++-18 -std=gnu++17 -E checking whether the compiler supports GNU C++... (cached) yes checking whether clang++-18 -std=gnu++17 accepts -g... (cached) yes checking for clang++-18 -std=gnu++17 option to enable C++11 features... (cached) none needed checking whether we have a suitable tempdir... /tmp/RtmpMkVC4I/working_dir checking whether R CMD SHLIB can already compile programs using OpenMP... yes checking LAPACK_LIBS... system LAPACK found configure: creating ./config.status config.status: creating inst/include/RcppArmadillo/config/RcppArmadilloConfigGenerated.h config.status: creating src/Makevars ** libs using C++ compiler: ‘Debian clang version 18.1.8 (1)’ clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c RcppArmadillo.cpp -o RcppArmadillo.o In file included from RcppArmadillo.cpp:21: In file included from ../inst/include/RcppArmadillo/Lighter:34: In file included from ../inst/include/RcppArmadillo/interface/RcppArmadilloForward.h:25: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/Rcpp/include/RcppCommon.h:30: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/Rcpp/include/Rcpp/r/headers.h:26:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 26 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o In file included from RcppExports.cpp:4: In file included from ./../inst/include/RcppArmadillo.h:29: In file included from ../inst/include/RcppArmadillo/interface/RcppArmadilloForward.h:25: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/Rcpp/include/RcppCommon.h:30: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/Rcpp/include/Rcpp/r/headers.h:26:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 26 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c fastLm.cpp -o fastLm.o In file included from fastLm.cpp:22: In file included from ../inst/include/RcppArmadillo/Lighter:34: In file included from ../inst/include/RcppArmadillo/interface/RcppArmadilloForward.h:25: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/Rcpp/include/RcppCommon.h:30: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/Rcpp/include/Rcpp/r/headers.h:26:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 26 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o RcppArmadillo.so RcppArmadillo.o RcppExports.o fastLm.o -llapack -L/home/hornik/tmp/R/lib -lRblas -L/usr/lib/llvm-18/lib -lFortran_main -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R/lib -lR installing to /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/00LOCK-RcppArmadillo/00new/RcppArmadillo/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (RcppArmadillo) * installing *source* package ‘goftest’ ... ** package ‘goftest’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 18.1.8 (1)’ clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c ADinf.c -o ADinf.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c AnDarl.c -o AnDarl.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-18 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o goftest.so ADinf.o AnDarl.o init.o -L/home/hornik/tmp/R/lib -lR installing to /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/00LOCK-goftest/00new/goftest/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (goftest) * installing *source* package ‘deSolve’ ... ** package ‘deSolve’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 18.1.8 (1)’ using Fortran compiler: ‘Debian flang-new version 18.1.8 (1)’ clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c DLLutil.c -o DLLutil.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c R_init_deSolve.c -o R_init_deSolve.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c brent.c -o brent.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c call_daspk.c -o call_daspk.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c call_euler.c -o call_euler.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c call_iteration.c -o call_iteration.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c call_lsoda.c -o call_lsoda.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c call_radau.c -o call_radau.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c call_rk4.c -o call_rk4.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c call_rkAuto.c -o call_rkAuto.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c call_rkFixed.c -o call_rkFixed.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c call_rkImplicit.c -o call_rkImplicit.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c call_zvode.c -o call_zvode.o flang-new-18 -fpic -g -O2 -c daux.f -o daux.o flang-new-18 -fpic -g -O2 -c ddaspk.f -o ddaspk.o ./ddaspk.f:2631:7: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #2: incompatible dummy data object shapes CALL DCOPY (NEQ, PHI(1,1), 1, Y, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./ddaspk.f:2584:7: previous reference to 'dcopy' CALL DCOPY (NEQ, Y, 1, PHI(1,1), 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./ddaspk.f:2632:7: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #2: incompatible dummy data object shapes CALL DCOPY (NEQ, PHI(1,2), 1, YPRIME, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./ddaspk.f:2584:7: previous reference to 'dcopy' CALL DCOPY (NEQ, Y, 1, PHI(1,1), 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./ddaspk.f:3849:7: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #4: incompatible dummy data object shapes CALL DCOPY (NEQ, R, 1, DELTA, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./ddaspk.f:2584:7: previous reference to 'dcopy' CALL DCOPY (NEQ, Y, 1, PHI(1,1), 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./ddaspk.f:4036:7: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #4: incompatible dummy data object shapes CALL DCOPY (NEQ, YNEW, 1, Y, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./ddaspk.f:2584:7: previous reference to 'dcopy' CALL DCOPY (NEQ, Y, 1, PHI(1,1), 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./ddaspk.f:4037:7: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #4: incompatible dummy data object shapes CALL DCOPY (NEQ, YPNEW, 1, YPRIME, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./ddaspk.f:2584:7: previous reference to 'dcopy' CALL DCOPY (NEQ, Y, 1, PHI(1,1), 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./ddaspk.f:4984:9: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #4: incompatible dummy data object shapes CALL DCOPY (NEQ, SAVR, 1, DELTA, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./ddaspk.f:2584:7: previous reference to 'dcopy' CALL DCOPY (NEQ, Y, 1, PHI(1,1), 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./ddaspk.f:5109:7: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #4: incompatible dummy data object shapes CALL DCOPY (NEQ, DELTA, 1, SAVR, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./ddaspk.f:2584:7: previous reference to 'dcopy' CALL DCOPY (NEQ, Y, 1, PHI(1,1), 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./ddaspk.f:5169:7: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #4: incompatible dummy data object shapes CALL DCOPY (NEQ, SAVR, 1, DELTA, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./ddaspk.f:2584:7: previous reference to 'dcopy' CALL DCOPY (NEQ, Y, 1, PHI(1,1), 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./ddaspk.f:5363:7: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #4: incompatible dummy data object shapes CALL DCOPY(NEQ, YNEW, 1, Y, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./ddaspk.f:2584:7: previous reference to 'dcopy' CALL DCOPY (NEQ, Y, 1, PHI(1,1), 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./ddaspk.f:5364:7: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #4: incompatible dummy data object shapes CALL DCOPY(NEQ, YPNEW, 1, YPRIME, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./ddaspk.f:2584:7: previous reference to 'dcopy' CALL DCOPY (NEQ, Y, 1, PHI(1,1), 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./ddaspk.f:5443:7: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #4: incompatible dummy data object shapes CALL DCOPY(NEQ, SAVR, 1, R, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./ddaspk.f:2584:7: previous reference to 'dcopy' CALL DCOPY (NEQ, Y, 1, PHI(1,1), 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./ddaspk.f:6028:25: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #2: incompatible dummy data object shapes IF (NRSTS .GT. 0) CALL DCOPY (NEQ, WM(LDL), 1, WM(LR),1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./ddaspk.f:2584:7: previous reference to 'dcopy' CALL DCOPY (NEQ, Y, 1, PHI(1,1), 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./ddaspk.f:6245:7: warning: Reference to the procedure 'dscal' has an implicit interface that is distinct from another reference: incompatible dummy argument #3: incompatible dummy data object shapes CALL DSCAL (NEQ, TEM, V(1,1), 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./ddaspk.f:5444:7: previous reference to 'dscal' CALL DSCAL (NEQ, RSQRTN, WT, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./ddaspk.f:6286:13: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #2: incompatible dummy data object shapes CALL DCOPY (NEQ, V(1,1), 1, DL, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./ddaspk.f:2584:7: previous reference to 'dcopy' CALL DCOPY (NEQ, Y, 1, PHI(1,1), 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./ddaspk.f:6316:9: warning: Reference to the procedure 'dscal' has an implicit interface that is distinct from another reference: incompatible dummy argument #3: incompatible dummy data object shapes CALL DSCAL (NEQ, TEM, V(1,LL+1), 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./ddaspk.f:5444:7: previous reference to 'dscal' CALL DSCAL (NEQ, RSQRTN, WT, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./ddaspk.f:6338:13: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #2: incompatible dummy data object shapes CALL DCOPY (NEQ, V(1,1), 1, DL, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./ddaspk.f:2584:7: previous reference to 'dcopy' CALL DCOPY (NEQ, Y, 1, PHI(1,1), 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c deSolve_utils.c -o deSolve_utils.o flang-new-18 -fpic -g -O2 -c dintdy2.f -o dintdy2.o flang-new-18 -fpic -g -O2 -c dlinpk.f -o dlinpk.o flang-new-18 -fpic -g -O2 -c dlsoder.f -o dlsoder.o flang-new-18 -fpic -g -O2 -c dsparsk.f -o dsparsk.o flang-new-18 -fpic -g -O2 -c dvode.f -o dvode.o ./dvode.f:433:7: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #2: incompatible dummy data object shapes CALL DCOPY (N, Y, 1, RWORK(LYH), 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./dvode.f:394:7: previous reference to 'dcopy' CALL DCOPY (N, RWORK(LWM), 1, RWORK(LSAVF), 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./dvode.f:617:7: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #4: incompatible dummy data object shapes CALL DCOPY (N, RWORK(LYH), 1, Y, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./dvode.f:394:7: previous reference to 'dcopy' CALL DCOPY (N, RWORK(LWM), 1, RWORK(LSAVF), 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./dvode.f:701:7: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #4: incompatible dummy data object shapes CALL DCOPY (N, RWORK(LYH), 1, Y, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./dvode.f:394:7: previous reference to 'dcopy' CALL DCOPY (N, RWORK(LWM), 1, RWORK(LSAVF), 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./dvode.f:1094:7: warning: Reference to the procedure 'dscal' has an implicit interface that is distinct from another reference: incompatible dummy argument #3: incompatible dummy data object shapes CALL DSCAL (N, R, DKY, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^ ./dvode.f:454:7: previous reference to 'dscal' CALL DSCAL (N, H0, RWORK(LF0), 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./dvode.f:1420:7: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #2: incompatible dummy data object shapes CALL DCOPY (N, ACOR, 1, YH(1,LMAX), 1 ) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./dvode.f:394:7: previous reference to 'dcopy' CALL DCOPY (N, RWORK(LWM), 1, RWORK(LSAVF), 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./dvode.f:1524:7: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #2: incompatible dummy data object shapes CALL DCOPY (N, ACOR, 1, YH(1,LMAX), 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./dvode.f:394:7: previous reference to 'dcopy' CALL DCOPY (N, RWORK(LWM), 1, RWORK(LSAVF), 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./dvode.f:1551:7: warning: Reference to the procedure 'dscal' has an implicit interface that is distinct from another reference: incompatible dummy argument #3: incompatible dummy data object shapes CALL DSCAL (N, R, ACOR, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^ ./dvode.f:454:7: previous reference to 'dscal' CALL DSCAL (N, H0, RWORK(LF0), 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./dvode.f:1945:9: warning: Reference to the procedure 'daxpy' has an implicit interface that is distinct from another reference: incompatible dummy argument #3: incompatible dummy data object shapes CALL DAXPY (N, EL(J), YH(1,LP1), 1, YH(1,J), 1 ) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./dvode.f:1416:9: previous reference to 'daxpy' CALL DAXPY (N, EL(J), ACOR, 1, YH(1,J), 1 ) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./dvode.f:2091:7: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #4: incompatible dummy data object shapes CALL DCOPY (N, YH(1,1), 1, Y, 1 ) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./dvode.f:394:7: previous reference to 'dcopy' CALL DCOPY (N, RWORK(LWM), 1, RWORK(LSAVF), 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./dvode.f:2128:7: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #2: incompatible dummy data object shapes CALL DCOPY (N, SAVF, 1, ACOR, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./dvode.f:394:7: previous reference to 'dcopy' CALL DCOPY (N, RWORK(LWM), 1, RWORK(LSAVF), 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./dvode.f:2144:9: warning: Reference to the procedure 'dscal' has an implicit interface that is distinct from another reference: incompatible dummy argument #3: incompatible dummy data object shapes CALL DSCAL (N, CSCALE, Y, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./dvode.f:454:7: previous reference to 'dscal' CALL DSCAL (N, H0, RWORK(LF0), 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./dvode.f:2147:7: warning: Reference to the procedure 'daxpy' has an implicit interface that is distinct from another reference: incompatible dummy argument #5: incompatible dummy data object shapes CALL DAXPY (N, ONE, Y, 1, ACOR, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./dvode.f:1416:9: previous reference to 'daxpy' CALL DAXPY (N, EL(J), ACOR, 1, YH(1,J), 1 ) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ flang-new-18 -fpic -g -O2 -c errmsg.f -o errmsg.o ./errmsg.f:19:9: warning: Reference to the procedure 'dblepr' has an implicit interface that is distinct from another reference: incompatible dummy argument #3: incompatible dummy data object shapes call dblepr(msg, -1, DBL, 2) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./errmsg.f:11:9: previous reference to 'dblepr' call dblepr(msg, -1, DBL, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^ clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c ex_Aquaphy.c -o ex_Aquaphy.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c ex_CCL4model.c -o ex_CCL4model.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c ex_ChemicalDAE.c -o ex_ChemicalDAE.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c ex_SCOC.c -o ex_SCOC.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c forcings.c -o forcings.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c lags.c -o lags.o flang-new-18 -fpic -g -O2 -c opkda1.f -o opkda1.o ./opkda1.f:887:2: warning: Compiler directive was ignored Cdir$ ivdep ^^^^^^^^^^ ./opkda1.f:986:2: warning: Compiler directive was ignored Cdir$ ivdep ^^^^^^^^^^ ./opkda1.f:1048:2: warning: Compiler directive was ignored Cdir$ ivdep ^^^^^^^^^^ ./opkda1.f:4183:2: warning: Compiler directive was ignored CDIR$ IVDEP ^^^^^^^^^^ ./opkda1.f:4304:2: warning: Compiler directive was ignored CDIR$ IVDEP ^^^^^^^^^^ ./opkda1.f:4472:2: warning: Compiler directive was ignored CDIR$ IVDEP ^^^^^^^^^^ ./opkda1.f:5222:7: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #2: incompatible dummy data object shapes CALL DCOPY (NG, GX, 1, G1, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./opkda1.f:5043:7: previous reference to 'dcopy' CALL DCOPY (NGC, GX, 1, G0, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./opkda1.f:5229:7: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #2: incompatible dummy data object shapes CALL DCOPY (NG, GX, 1, G1, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./opkda1.f:5043:7: previous reference to 'dcopy' CALL DCOPY (NGC, GX, 1, G0, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./opkda1.f:5234:7: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #2: incompatible dummy data object shapes CALL DCOPY (NG, GX, 1, G0, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./opkda1.f:5043:7: previous reference to 'dcopy' CALL DCOPY (NGC, GX, 1, G0, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./opkda1.f:5244:7: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #2: incompatible dummy data object shapes CALL DCOPY (NG, G1, 1, GX, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./opkda1.f:5043:7: previous reference to 'dcopy' CALL DCOPY (NGC, GX, 1, G0, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./opkda1.f:5259:7: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #2: incompatible dummy data object shapes CALL DCOPY (NG, G1, 1, GX, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./opkda1.f:5043:7: previous reference to 'dcopy' CALL DCOPY (NGC, GX, 1, G0, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./opkda1.f:5268:7: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #2: incompatible dummy data object shapes 420 CALL DCOPY (NG, G1, 1, GX, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./opkda1.f:5043:7: previous reference to 'dcopy' CALL DCOPY (NGC, GX, 1, G0, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./opkda1.f:5540:2: warning: Compiler directive was ignored CDIR$ IVDEP ^^^^^^^^^^ ./opkda1.f:5641:2: warning: Compiler directive was ignored CDIR$ IVDEP ^^^^^^^^^^ ./opkda1.f:5703:2: warning: Compiler directive was ignored CDIR$ IVDEP ^^^^^^^^^^ ./opkda1.f:5963:7: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #4: incompatible dummy data object shapes CALL DCOPY (N, X, 1, WM(LB), 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./opkda1.f:5043:7: previous reference to 'dcopy' CALL DCOPY (NGC, GX, 1, G0, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./opkda1.f:5987:7: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #4: incompatible dummy data object shapes CALL DCOPY (N, X, 1, WM(LB), 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./opkda1.f:5043:7: previous reference to 'dcopy' CALL DCOPY (NGC, GX, 1, G0, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./opkda1.f:6010:7: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #4: incompatible dummy data object shapes CALL DCOPY (N, X, 1, WM(LR), 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./opkda1.f:5043:7: previous reference to 'dcopy' CALL DCOPY (NGC, GX, 1, G0, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./opkda1.f:6030:7: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #4: incompatible dummy data object shapes CALL DCOPY (N, X, 1, WM(LR), 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./opkda1.f:5043:7: previous reference to 'dcopy' CALL DCOPY (NGC, GX, 1, G0, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./opkda1.f:6048:7: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #4: incompatible dummy data object shapes CALL DCOPY (N, X, 1, WM(LB), 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./opkda1.f:5043:7: previous reference to 'dcopy' CALL DCOPY (NGC, GX, 1, G0, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./opkda1.f:6185:7: warning: Reference to the procedure 'dscal' has an implicit interface that is distinct from another reference: incompatible dummy argument #3: incompatible dummy data object shapes CALL DSCAL (N, TEM, V(1,1), 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./opkda1.f:5964:7: previous reference to 'dscal' CALL DSCAL (N, RSQRTN, EWT, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./opkda1.f:6234:9: warning: Reference to the procedure 'dscal' has an implicit interface that is distinct from another reference: incompatible dummy argument #3: incompatible dummy data object shapes CALL DSCAL (N, TEM, V(1,LL+1), 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./opkda1.f:5964:7: previous reference to 'dscal' CALL DSCAL (N, RSQRTN, EWT, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./opkda1.f:6636:7: warning: Reference to the procedure 'dscal' has an implicit interface that is distinct from another reference: incompatible dummy argument #3: incompatible dummy data object shapes CALL DSCAL (N, TEM, V(1,1), 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./opkda1.f:5964:7: previous reference to 'dscal' CALL DSCAL (N, RSQRTN, EWT, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./opkda1.f:6673:13: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #2: incompatible dummy data object shapes CALL DCOPY (N, V(1,1), 1, DL, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./opkda1.f:5043:7: previous reference to 'dcopy' CALL DCOPY (NGC, GX, 1, G0, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./opkda1.f:6703:9: warning: Reference to the procedure 'dscal' has an implicit interface that is distinct from another reference: incompatible dummy argument #3: incompatible dummy data object shapes CALL DSCAL (N, TEM, V(1,LL+1), 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./opkda1.f:5964:7: previous reference to 'dscal' CALL DSCAL (N, RSQRTN, EWT, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./opkda1.f:6872:7: warning: Reference to the procedure 'daxpy' has an implicit interface that is distinct from another reference: incompatible dummy argument #3: incompatible dummy data object shapes CALL DAXPY (N, ALPHA, P, 1, X, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./opkda1.f:6264:9: previous reference to 'daxpy' CALL DAXPY (N, B(I), V(1,I), 1, X, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./opkda1.f:6874:7: warning: Reference to the procedure 'daxpy' has an implicit interface that is distinct from another reference: incompatible dummy argument #3: incompatible dummy data object shapes CALL DAXPY (N, ALPHA, W, 1, R, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./opkda1.f:6264:9: previous reference to 'daxpy' CALL DAXPY (N, B(I), V(1,I), 1, X, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./opkda1.f:7027:7: warning: Reference to the procedure 'daxpy' has an implicit interface that is distinct from another reference: incompatible dummy argument #3: incompatible dummy data object shapes CALL DAXPY (N, ALPHA, P, 1, X, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./opkda1.f:6264:9: previous reference to 'daxpy' CALL DAXPY (N, B(I), V(1,I), 1, X, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./opkda1.f:7029:7: warning: Reference to the procedure 'daxpy' has an implicit interface that is distinct from another reference: incompatible dummy argument #3: incompatible dummy data object shapes CALL DAXPY (N, ALPHA, W, 1, R, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./opkda1.f:6264:9: previous reference to 'daxpy' CALL DAXPY (N, B(I), V(1,I), 1, X, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./opkda1.f:7317:16: warning: Reference to the procedure 'daxpy' has an implicit interface that is distinct from another reference: incompatible dummy argument #5: incompatible dummy data object shapes CALL DAXPY (N-K, T, A(K+1,K), 1, A(K+1,J), 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./opkda1.f:6264:9: previous reference to 'daxpy' CALL DAXPY (N, B(I), V(1,I), 1, X, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./opkda1.f:7458:13: warning: Reference to the procedure 'daxpy' has an implicit interface that is distinct from another reference: incompatible dummy argument #5: incompatible dummy data object shapes CALL DAXPY (K-1, T, A(1,K), 1, B(1), 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./opkda1.f:6264:9: previous reference to 'daxpy' CALL DAXPY (N, B(I), V(1,I), 1, X, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./opkda1.f:7686:13: warning: Reference to the procedure 'daxpy' has an implicit interface that is distinct from another reference: incompatible dummy argument #5: incompatible dummy data object shapes CALL DAXPY (K-1, T, A(1,K), 1, B(1), 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./opkda1.f:6264:9: previous reference to 'daxpy' CALL DAXPY (N, B(I), V(1,I), 1, X, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ flang-new-18 -fpic -g -O2 -c opkdmain.f -o opkdmain.o flang-new-18 -fpic -g -O2 -c radau5.f -o radau5.o flang-new-18 -fpic -g -O2 -c radau5a.f -o radau5a.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rk_auto.c -o rk_auto.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rk_fixed.c -o rk_fixed.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rk_implicit.c -o rk_implicit.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rk_util.c -o rk_util.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rprintf.c -o rprintf.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c twoDmap.c -o twoDmap.o flang-new-18 -fpic -g -O2 -c zvode.f -o zvode.o ./zvode.f:1363:7: warning: Reference to the procedure 'zcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #2: incompatible dummy data object shapes CALL ZCOPY (N, Y, 1, ZWORK(LYH), 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./zvode.f:1327:7: previous reference to 'zcopy' CALL ZCOPY (N, ZWORK(LWM), 1, ZWORK(LSAVF), 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./zvode.f:1540:7: warning: Reference to the procedure 'zcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #4: incompatible dummy data object shapes CALL ZCOPY (N, ZWORK(LYH), 1, Y, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./zvode.f:1327:7: previous reference to 'zcopy' CALL ZCOPY (N, ZWORK(LWM), 1, ZWORK(LSAVF), 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./zvode.f:1614:7: warning: Reference to the procedure 'zcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #4: incompatible dummy data object shapes CALL ZCOPY (N, ZWORK(LYH), 1, Y, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./zvode.f:1327:7: previous reference to 'zcopy' CALL ZCOPY (N, ZWORK(LWM), 1, ZWORK(LSAVF), 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./zvode.f:2318:7: warning: Reference to the procedure 'zcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #2: incompatible dummy data object shapes CALL ZCOPY (N, ACOR, 1, YH(1,LMAX), 1 ) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./zvode.f:1327:7: previous reference to 'zcopy' CALL ZCOPY (N, ZWORK(LWM), 1, ZWORK(LSAVF), 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./zvode.f:2422:7: warning: Reference to the procedure 'zcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #2: incompatible dummy data object shapes CALL ZCOPY (N, ACOR, 1, YH(1,LMAX), 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./zvode.f:1327:7: previous reference to 'zcopy' CALL ZCOPY (N, ZWORK(LWM), 1, ZWORK(LSAVF), 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./zvode.f:2985:7: warning: Reference to the procedure 'zcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #4: incompatible dummy data object shapes CALL ZCOPY (N, YH(1,1), 1, Y, 1 ) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./zvode.f:1327:7: previous reference to 'zcopy' CALL ZCOPY (N, ZWORK(LWM), 1, ZWORK(LSAVF), 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./zvode.f:3022:7: warning: Reference to the procedure 'zcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #2: incompatible dummy data object shapes CALL ZCOPY (N, SAVF, 1, ACOR, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./zvode.f:1327:7: previous reference to 'zcopy' CALL ZCOPY (N, ZWORK(LWM), 1, ZWORK(LSAVF), 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./zvode.f:3207:23: warning: Reference to the procedure 'zcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #2: incompatible dummy data object shapes IF (JSV .EQ. 1) CALL ZCOPY (LENP, WM, 1, WM(LOCJS), 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./zvode.f:1327:7: previous reference to 'zcopy' CALL ZCOPY (N, ZWORK(LWM), 1, ZWORK(LSAVF), 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./zvode.f:3233:23: warning: Reference to the procedure 'zcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #2: incompatible dummy data object shapes IF (JSV .EQ. 1) CALL ZCOPY (LENP, WM, 1, WM(LOCJS), 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./zvode.f:1327:7: previous reference to 'zcopy' CALL ZCOPY (N, ZWORK(LWM), 1, ZWORK(LSAVF), 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./zvode.f:3239:7: warning: Reference to the procedure 'zcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #4: incompatible dummy data object shapes CALL ZCOPY (LENP, WM(LOCJS), 1, WM, 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./zvode.f:1327:7: previous reference to 'zcopy' CALL ZCOPY (N, ZWORK(LWM), 1, ZWORK(LSAVF), 1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ clang-18 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o deSolve.so DLLutil.o R_init_deSolve.o brent.o call_daspk.o call_euler.o call_iteration.o call_lsoda.o call_radau.o call_rk4.o call_rkAuto.o call_rkFixed.o call_rkImplicit.o call_zvode.o daux.o ddaspk.o deSolve_utils.o dintdy2.o dlinpk.o dlsoder.o dsparsk.o dvode.o errmsg.o ex_Aquaphy.o ex_CCL4model.o ex_ChemicalDAE.o ex_SCOC.o forcings.o lags.o opkda1.o opkdmain.o radau5.o radau5a.o rk_auto.o rk_fixed.o rk_implicit.o rk_util.o rprintf.o twoDmap.o zvode.o -L/home/hornik/tmp/R/lib -lRblas -L/usr/lib/llvm-18/lib -lFortran_main -lFortranRuntime -lFortranDecimal -lm -L/usr/lib/llvm-18/lib -lFortran_main -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R/lib -lR installing to /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/00LOCK-deSolve/00new/deSolve/libs ** R ** data *** moving datasets to lazyload DB ** demo ** inst ** byte-compile and prepare package for lazy loading Creating a new generic function for ‘matplot’ in package ‘deSolve’ ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (deSolve) * installing *source* package ‘contfrac’ ... ** package ‘contfrac’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 18.1.8 (1)’ clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c contfrac.c -o contfrac.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c contfrac_init.c -o contfrac_init.o clang-18 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o contfrac.so contfrac.o contfrac_init.o -L/home/hornik/tmp/R/lib -lR installing to /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/00LOCK-contfrac/00new/contfrac/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (contfrac) * installing *source* package ‘elliptic’ ... ** package ‘elliptic’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (elliptic) * installing *source* package ‘bit’ ... ** package ‘bit’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 18.1.8 (1)’ clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c attrutil.c -o attrutil.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bit.c -o bit.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c chunkutil.c -o chunkutil.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c clone.c -o clone.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c integerutil.c -o integerutil.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c merge.c -o merge.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rle.c -o rle.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c sort.c -o sort.o clang-18 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o bit.so attrutil.o bit.o chunkutil.o clone.o init.o integerutil.o merge.o rle.o sort.o -L/home/hornik/tmp/R/lib -lR installing to /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/00LOCK-bit/00new/bit/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bit) * installing *source* package ‘tzdb’ ... ** package ‘tzdb’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Debian clang version 18.1.8 (1)’ clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -DINSTALL=dummy -DAUTO_DOWNLOAD=0 -DHAS_REMOTE_API=0 -DUSE_OS_TZDB=0 -DONLY_C_LOCALE=1 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c api.cpp -o api.o In file included from api.cpp:2: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :9:9: note: previous definition is here 9 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -DINSTALL=dummy -DAUTO_DOWNLOAD=0 -DHAS_REMOTE_API=0 -DUSE_OS_TZDB=0 -DONLY_C_LOCALE=1 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c cpp11.cpp -o cpp11.o In file included from cpp11.cpp:5: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/declarations.hpp:13: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11.hpp:3: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :9:9: note: previous definition is here 9 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -DINSTALL=dummy -DAUTO_DOWNLOAD=0 -DHAS_REMOTE_API=0 -DUSE_OS_TZDB=0 -DONLY_C_LOCALE=1 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c names.cpp -o names.o In file included from names.cpp:2: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/strings.hpp:6: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :9:9: note: previous definition is here 9 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -DINSTALL=dummy -DAUTO_DOWNLOAD=0 -DHAS_REMOTE_API=0 -DUSE_OS_TZDB=0 -DONLY_C_LOCALE=1 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c path.cpp -o path.o In file included from path.cpp:2: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/strings.hpp:6: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :9:9: note: previous definition is here 9 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -DINSTALL=dummy -DAUTO_DOWNLOAD=0 -DHAS_REMOTE_API=0 -DUSE_OS_TZDB=0 -DONLY_C_LOCALE=1 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c tz.cpp -o tz.o clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -DINSTALL=dummy -DAUTO_DOWNLOAD=0 -DHAS_REMOTE_API=0 -DUSE_OS_TZDB=0 -DONLY_C_LOCALE=1 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c version.cpp -o version.o In file included from version.cpp:2: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/strings.hpp:6: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :9:9: note: previous definition is here 9 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o tzdb.so api.o cpp11.o names.o path.o tz.o version.o -L/home/hornik/tmp/R/lib -lR installing to /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/00LOCK-tzdb/00new/tzdb/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tzdb) * installing *source* package ‘tidyselect’ ... ** package ‘tidyselect’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tidyselect) * installing *source* package ‘hms’ ... ** package ‘hms’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (hms) * installing *source* package ‘svglite’ ... ** package ‘svglite’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Debian clang version 18.1.8 (1)’ using C++11 clang++-18 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/systemfonts/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-error=enum-constexpr-conversion -DR_NO_REMAP -c cpp11.cpp -o cpp11.o In file included from cpp11.cpp:5: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/declarations.hpp:13: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11.hpp:3: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/systemfonts/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-error=enum-constexpr-conversion -DR_NO_REMAP -c devSVG.cpp -o devSVG.o In file included from devSVG.cpp:24: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/list.hpp:5: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++11 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o svglite.so cpp11.o devSVG.o -lpng -lz -L/home/hornik/tmp/R/lib -lR installing to /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/00LOCK-svglite/00new/svglite/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (svglite) * installing *source* package ‘lmom’ ... ** package ‘lmom’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 18.1.8 (1)’ using Fortran compiler: ‘Debian flang-new version 18.1.8 (1)’ flang-new-18 -fpic -g -O2 -c d1mach.f -o d1mach.o flang-new-18 -fpic -g -O2 -c dqagie.f -o dqagie.o flang-new-18 -fpic -g -O2 -c dqagse.f -o dqagse.o flang-new-18 -fpic -g -O2 -c dqelg.f -o dqelg.o flang-new-18 -fpic -g -O2 -c dqk15i.f -o dqk15i.o flang-new-18 -fpic -g -O2 -c dqk21.f -o dqk21.o flang-new-18 -fpic -g -O2 -c dqpsrt.f -o dqpsrt.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c lmomc.c -o lmomc.o flang-new-18 -fpic -g -O2 -c lmoments.f -o lmoments.o flang-new-18 -fpic -g -O2 -c samlm.f -o samlm.o clang-18 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o lmom.so d1mach.o dqagie.o dqagse.o dqelg.o dqk15i.o dqk21.o dqpsrt.o init.o lmomc.o lmoments.o samlm.o -L/usr/lib/llvm-18/lib -lFortran_main -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R/lib -lR installing to /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/00LOCK-lmom/00new/lmom/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (lmom) * installing *source* package ‘multitaper’ ... ** package ‘multitaper’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 18.1.8 (1)’ using Fortran compiler: ‘Debian flang-new version 18.1.8 (1)’ flang-new-18 -fpic -g -O2 -c djt.f -o djt.o flang-new-18 -fpic -g -O2 -c dpss.f90 -o dpss.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c multitaper_init.c -o multitaper_init.o flang-new-18 -fpic -g -O2 -c sine.f -o sine.o clang-18 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o multitaper.so djt.o dpss.o multitaper_init.o sine.o -llapack -L/home/hornik/tmp/R/lib -lRblas -L/usr/lib/llvm-18/lib -lFortran_main -lFortranRuntime -lFortranDecimal -lm -L/usr/lib/llvm-18/lib -lFortran_main -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R/lib -lR installing to /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/00LOCK-multitaper/00new/multitaper/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (multitaper) ERROR: dependency ‘survival’ is not available for package ‘fitdistrplus’ * removing ‘/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/fitdistrplus’ * installing *source* package ‘bookdown’ ... ** package ‘bookdown’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bookdown) * installing *source* package ‘gridGraphics’ ... ** package ‘gridGraphics’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (gridGraphics) * installing *source* package ‘FNN’ ... ** package ‘FNN’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 18.1.8 (1)’ using C++ compiler: ‘Debian clang version 18.1.8 (1)’ clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -Iinclude -DUSING_R -DUSING_RPRINT -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c ANN.cpp -o ANN.o clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -Iinclude -DUSING_R -DUSING_RPRINT -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c KNN_ANN.cpp -o KNN_ANN.o KNN_ANN.cpp:37:21: error: use of undeclared identifier 'error' 37 | if(data_pts==NULL) error("Cannot allocate memroy for data matrix!\n"); | ^ KNN_ANN.cpp:98:21: error: use of undeclared identifier 'error' 98 | if(data_pts==NULL) error("Cannot allocate memroy for data matrix!\n"); | ^ KNN_ANN.cpp:99:22: error: use of undeclared identifier 'error' 99 | if(query_pts==NULL) error("Cannot allocate memroy for query data matrix!\n"); | ^ KNN_ANN.cpp:151:21: error: use of undeclared identifier 'error' 151 | if(data_pts==NULL) error("Cannot allocate memroy for data matrix!\n"); | ^ KNN_ANN.cpp:212:21: error: use of undeclared identifier 'error' 212 | if(data_pts==NULL) error("Cannot allocate memroy for data matrix!\n"); | ^ KNN_ANN.cpp:213:22: error: use of undeclared identifier 'error' 213 | if(query_pts==NULL) error("Cannot allocate memroy for query data matrix!\n"); | ^ KNN_ANN.cpp:267:21: error: use of undeclared identifier 'error' 267 | if(data_pts==NULL) error("Cannot allocate memroy for data matrix!\n"); | ^ KNN_ANN.cpp:315:21: error: use of undeclared identifier 'error' 315 | if(data_pts==NULL) error("Cannot allocate memroy for data matrix!\n"); | ^ KNN_ANN.cpp:367:18: error: use of undeclared identifier 'error' 367 | if(X_pts==NULL) error("Cannot allocate memroy for X vector!\n"); | ^ KNN_ANN.cpp:368:18: error: use of undeclared identifier 'error' 368 | if(Y_pts==NULL) error("Cannot allocate memroy for Y vector!\n"); | ^ KNN_ANN.cpp:440:18: error: use of undeclared identifier 'error' 440 | if(X_pts==NULL) error("Cannot allocate memroy for X vector!\n"); | ^ KNN_ANN.cpp:441:18: error: use of undeclared identifier 'error' 441 | if(Y_pts==NULL) error("Cannot allocate memroy for Y vector!\n"); | ^ 12 errors generated. make: *** [/home/hornik/tmp/R/etc/Makeconf:202: KNN_ANN.o] Error 1 ERROR: compilation failed for package ‘FNN’ * removing ‘/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/FNN’ * installing *source* package ‘sp’ ... ** package ‘sp’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 18.1.8 (1)’ clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c Rcentroid.c -o Rcentroid.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c gcdist.c -o gcdist.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c pip.c -o pip.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c pip2.c -o pip2.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c sp_xports.c -o sp_xports.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c surfaceArea.c -o surfaceArea.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c zerodist.c -o zerodist.o clang-18 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o sp.so Rcentroid.o gcdist.o init.o pip.o pip2.o sp_xports.o surfaceArea.o zerodist.o -L/home/hornik/tmp/R/lib -lR installing to /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/00LOCK-sp/00new/sp/libs ** R ** data ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (sp) * installing *source* package ‘munsell’ ... ** package ‘munsell’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (munsell) * installing *source* package ‘Lmoments’ ... ** package ‘Lmoments’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Debian clang version 18.1.8 (1)’ using C++11 clang++-18 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/Rcpp/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-error=enum-constexpr-conversion -DR_NO_REMAP -c Lmoments.cpp -o Lmoments.o In file included from Lmoments.cpp:1: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/RcppArmadillo/include/RcppArmadillo.h:29: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:25: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/Rcpp/include/RcppCommon.h:30: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/Rcpp/include/Rcpp/r/headers.h:26:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 26 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/Rcpp/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-error=enum-constexpr-conversion -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o In file included from RcppExports.cpp:4: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/RcppArmadillo/include/RcppArmadillo.h:29: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:25: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/Rcpp/include/RcppCommon.h:30: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/Rcpp/include/Rcpp/r/headers.h:26:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 26 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++11 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o Lmoments.so Lmoments.o RcppExports.o -llapack -L/home/hornik/tmp/R/lib -lRblas -L/usr/lib/llvm-18/lib -lFortran_main -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R/lib -lR installing to /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/00LOCK-Lmoments/00new/Lmoments/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Lmoments) * installing *source* package ‘hypergeo’ ... ** package ‘hypergeo’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (hypergeo) * installing *source* package ‘progress’ ... ** package ‘progress’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (progress) * installing *source* package ‘bit64’ ... ** package ‘bit64’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 18.1.8 (1)’ clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bsearch.c -o bsearch.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c cache.c -o cache.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c hash64.c -o hash64.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c integer64.c -o integer64.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c sort64.c -o sort64.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c sortuse64.c -o sortuse64.o clang-18 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o bit64.so bsearch.o cache.o hash64.o init.o integer64.o sort64.o sortuse64.o -lm -L/home/hornik/tmp/R/lib -lR installing to /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/00LOCK-bit64/00new/bit64/libs ** R ** data ** exec ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bit64) * installing *source* package ‘lubridate’ ... ** package ‘lubridate’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 18.1.8 (1)’ clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c datetime.c -o datetime.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c period.c -o period.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c tparse.c -o tparse.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c utils.c -o utils.o clang-18 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o lubridate.so datetime.o init.o period.o tparse.o utils.o -L/home/hornik/tmp/R/lib -lR installing to /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/00LOCK-lubridate/00new/lubridate/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (lubridate) * installing *source* package ‘checkmate’ ... ** package ‘checkmate’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 18.1.8 (1)’ clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c all_missing.c -o all_missing.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c any_infinite.c -o any_infinite.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c any_missing.c -o any_missing.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c any_nan.c -o any_nan.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c checks.c -o checks.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c find_nchar.c -o find_nchar.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c guess_type.c -o guess_type.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c helper.c -o helper.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c integerish.c -o integerish.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c is_sorted.c -o is_sorted.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c qassert.c -o qassert.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c which_first.c -o which_first.o clang-18 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o checkmate.so all_missing.o any_infinite.o any_missing.o any_nan.o checks.o find_nchar.o guess_type.o helper.o init.o integerish.o is_sorted.o qassert.o which_first.o -L/home/hornik/tmp/R/lib -lR installing to /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/00LOCK-checkmate/00new/checkmate/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (checkmate) * installing *source* package ‘reshape’ ... ** package ‘reshape’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (reshape) * installing *source* package ‘dplyr’ ... ** package ‘dplyr’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Debian clang version 18.1.8 (1)’ clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c chop.cpp -o chop.o In file included from chop.cpp:1: ./dplyr.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 4 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c filter.cpp -o filter.o In file included from filter.cpp:1: ./dplyr.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 4 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c funs.cpp -o funs.o In file included from funs.cpp:1: ./dplyr.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 4 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c group_by.cpp -o group_by.o In file included from group_by.cpp:1: ./dplyr.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 4 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c group_data.cpp -o group_data.o In file included from group_data.cpp:1: ./dplyr.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 4 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c imports.cpp -o imports.o In file included from imports.cpp:1: ./dplyr.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 4 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c init.cpp -o init.o In file included from init.cpp:1: ./dplyr.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 4 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c mask.cpp -o mask.o In file included from mask.cpp:1: ./dplyr.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 4 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c mutate.cpp -o mutate.o In file included from mutate.cpp:1: ./dplyr.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 4 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c reconstruct.cpp -o reconstruct.o In file included from reconstruct.cpp:1: ./dplyr.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 4 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c slice.cpp -o slice.o In file included from slice.cpp:1: ./dplyr.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 4 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c summarise.cpp -o summarise.o In file included from summarise.cpp:1: ./dplyr.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 4 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o dplyr.so chop.o filter.o funs.o group_by.o group_data.o imports.o init.o mask.o mutate.o reconstruct.o slice.o summarise.o -L/home/hornik/tmp/R/lib -lR installing to /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/00LOCK-dplyr/00new/dplyr/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (dplyr) * installing *source* package ‘waveslim’ ... ** package ‘waveslim’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 18.1.8 (1)’ clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c dwt.c -o dwt.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c dwt2.c -o dwt2.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c dwt3.c -o dwt3.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c hosking.c -o hosking.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-18 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o waveslim.so dwt.o dwt2.o dwt3.o hosking.o init.o -L/home/hornik/tmp/R/lib -lR installing to /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/00LOCK-waveslim/00new/waveslim/libs ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (waveslim) * installing *source* package ‘scales’ ... ** package ‘scales’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (scales) * installing *source* package ‘lmomco’ ... ** package ‘lmomco’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (lmomco) * installing *source* package ‘vroom’ ... ** package ‘vroom’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 18.1.8 (1)’ using C++ compiler: ‘Debian clang version 18.1.8 (1)’ clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/progress/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c Iconv.cpp -o Iconv.o In file included from Iconv.cpp:1: In file included from ./Iconv.h:4: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :6:9: note: previous definition is here 6 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/progress/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c LocaleInfo.cpp -o LocaleInfo.o In file included from LocaleInfo.cpp:1: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/as.hpp:10: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :6:9: note: previous definition is here 6 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/progress/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c altrep.cc -o altrep.o In file included from altrep.cc:1: In file included from ./altrep.h:1: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :6:9: note: previous definition is here 6 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/progress/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c cpp11.cpp -o cpp11.o In file included from cpp11.cpp:4: In file included from ./vroom_types.h:1: In file included from ./vroom_errors.h:5: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/data_frame.hpp:10: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :6:9: note: previous definition is here 6 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/progress/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c delimited_index.cc -o delimited_index.o In file included from delimited_index.cc:1: In file included from ./delimited_index.h:18: In file included from ./utils.h:4: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :6:9: note: previous definition is here 6 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/progress/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c delimited_index_connection.cc -o delimited_index_connection.o In file included from delimited_index_connection.cc:1: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/function.hpp:9: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :6:9: note: previous definition is here 6 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/progress/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c fixed_width_index_connection.cc -o fixed_width_index_connection.o In file included from fixed_width_index_connection.cc:1: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/as.hpp:10: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :6:9: note: previous definition is here 6 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/progress/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c gen.cc -o gen.o In file included from gen.cc:1: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/strings.hpp:6: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :6:9: note: previous definition is here 6 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/progress/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c grisu3.c -o grisu3.o clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/progress/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c guess_type.cc -o guess_type.o In file included from guess_type.cc:1: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/list.hpp:5: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :6:9: note: previous definition is here 6 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/progress/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c iconv_file.cc -o iconv_file.o In file included from iconv_file.cc:2: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :6:9: note: previous definition is here 6 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/progress/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c index_collection.cc -o index_collection.o In file included from index_collection.cc:1: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/function.hpp:9: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :6:9: note: previous definition is here 6 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/progress/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c vroom.cc -o vroom.o In file included from vroom.cc:3: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :6:9: note: previous definition is here 6 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/progress/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c vroom_big_int.cc -o vroom_big_int.o In file included from vroom_big_int.cc:1: In file included from ./vroom_big_int.h:3: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/doubles.hpp:8: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :6:9: note: previous definition is here 6 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/progress/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c vroom_chr.cc -o vroom_chr.o In file included from vroom_chr.cc:1: In file included from ./vroom_chr.h:3: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/strings.hpp:6: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :6:9: note: previous definition is here 6 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/progress/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c vroom_date.cc -o vroom_date.o In file included from vroom_date.cc:1: In file included from ./vroom_date.h:3: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/doubles.hpp:8: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :6:9: note: previous definition is here 6 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/progress/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c vroom_dbl.cc -o vroom_dbl.o In file included from vroom_dbl.cc:1: In file included from ./vroom_dbl.h:1: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/doubles.hpp:8: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :6:9: note: previous definition is here 6 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/progress/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c vroom_dttm.cc -o vroom_dttm.o In file included from vroom_dttm.cc:1: In file included from ./vroom_dttm.h:3: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/doubles.hpp:8: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :6:9: note: previous definition is here 6 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/progress/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c vroom_errors.cpp -o vroom_errors.o In file included from vroom_errors.cpp:1: In file included from ./vroom_errors.h:5: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/data_frame.hpp:10: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :6:9: note: previous definition is here 6 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/progress/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c vroom_fct.cc -o vroom_fct.o In file included from vroom_fct.cc:1: In file included from ./vroom_fct.h:1: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/doubles.hpp:8: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :6:9: note: previous definition is here 6 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/progress/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c vroom_fwf.cc -o vroom_fwf.o In file included from vroom_fwf.cc:1: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/list.hpp:5: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :6:9: note: previous definition is here 6 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/progress/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c vroom_int.cc -o vroom_int.o In file included from vroom_int.cc:1: In file included from ./vroom_int.h:3: In file included from ./altrep.h:1: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :6:9: note: previous definition is here 6 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/progress/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c vroom_num.cc -o vroom_num.o In file included from vroom_num.cc:1: In file included from ./vroom_num.h:3: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/doubles.hpp:8: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :6:9: note: previous definition is here 6 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/progress/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c vroom_rle.cc -o vroom_rle.o In file included from vroom_rle.cc:1: In file included from ./vroom_rle.h:3: In file included from ./altrep.h:1: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :6:9: note: previous definition is here 6 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/progress/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c vroom_time.cc -o vroom_time.o In file included from vroom_time.cc:1: In file included from ./vroom_time.h:3: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/doubles.hpp:8: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :6:9: note: previous definition is here 6 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -Imio/include -DWIN32_LEAN_AND_MEAN -Ispdlog/include -DFMT_HEADER_ONLY -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/progress/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c vroom_write.cc -o vroom_write.o In file included from vroom_write.cc:7: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :6:9: note: previous definition is here 6 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o vroom.so Iconv.o LocaleInfo.o altrep.o cpp11.o delimited_index.o delimited_index_connection.o fixed_width_index_connection.o gen.o grisu3.o guess_type.o iconv_file.o index_collection.o vroom.o vroom_big_int.o vroom_chr.o vroom_date.o vroom_dbl.o vroom_dttm.o vroom_errors.o vroom_fct.o vroom_fwf.o vroom_int.o vroom_num.o vroom_rle.o vroom_time.o vroom_write.o -L/home/hornik/tmp/R/lib -lR installing to /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/00LOCK-vroom/00new/vroom/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (vroom) * installing *source* package ‘tidyr’ ... ** package ‘tidyr’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Debian clang version 18.1.8 (1)’ clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c cpp11.cpp -o cpp11.o In file included from cpp11.cpp:5: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/declarations.hpp:13: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11.hpp:3: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c melt.cpp -o melt.o In file included from melt.cpp:3: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c simplifyPieces.cpp -o simplifyPieces.o In file included from simplifyPieces.cpp:1: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/list.hpp:5: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o tidyr.so cpp11.o melt.o simplifyPieces.o -L/home/hornik/tmp/R/lib -lR installing to /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/00LOCK-tidyr/00new/tidyr/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tidyr) ERROR: dependency ‘mgcv’ is not available for package ‘ggplot2’ * removing ‘/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/ggplot2’ * installing *source* package ‘kableExtra’ ... ** package ‘kableExtra’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (kableExtra) * installing *source* package ‘readr’ ... ** package ‘readr’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 18.1.8 (1)’ using C++ compiler: ‘Debian clang version 18.1.8 (1)’ clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c Collector.cpp -o Collector.o In file included from Collector.cpp:1: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/list.hpp:5: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c CollectorGuess.cpp -o CollectorGuess.o In file included from CollectorGuess.cpp:1: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c Iconv.cpp -o Iconv.o In file included from Iconv.cpp:1: In file included from ./Iconv.h:4: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c LocaleInfo.cpp -o LocaleInfo.o In file included from LocaleInfo.cpp:1: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/as.hpp:10: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c Reader.cpp -o Reader.o In file included from Reader.cpp:1: In file included from ./Reader.h:1: In file included from ./Collector.h:3: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/doubles.hpp:8: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c Source.cpp -o Source.o In file included from Source.cpp:1: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/list.hpp:5: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c Tokenizer.cpp -o Tokenizer.o In file included from Tokenizer.cpp:1: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/as.hpp:10: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c TokenizerDelim.cpp -o TokenizerDelim.o In file included from TokenizerDelim.cpp:1: In file included from ./TokenizerDelim.h:3: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c TokenizerFwf.cpp -o TokenizerFwf.o In file included from TokenizerFwf.cpp:1: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/list.hpp:5: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c TokenizerWs.cpp -o TokenizerWs.o In file included from TokenizerWs.cpp:1: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c connection.cpp -o connection.o In file included from connection.cpp:1: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c cpp11.cpp -o cpp11.o In file included from cpp11.cpp:5: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/declarations.hpp:13: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11.hpp:3: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c datetime.cpp -o datetime.o In file included from datetime.cpp:1: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/doubles.hpp:8: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c grisu3.c -o grisu3.o clang-18 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c parse.cpp -o parse.o In file included from parse.cpp:1: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c read.cpp -o read.o In file included from read.cpp:3: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/environment.hpp:6: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c type_convert.cpp -o type_convert.o In file included from type_convert.cpp:1: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/list.hpp:5: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c write.cpp -o write.o In file included from write.cpp:1: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/list.hpp:5: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include' -I'/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/tzdb/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c write_delim.cpp -o write_delim.o In file included from write_delim.cpp:1: In file included from /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/list.hpp:5: /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o readr.so Collector.o CollectorGuess.o Iconv.o LocaleInfo.o Reader.o Source.o Tokenizer.o TokenizerDelim.o TokenizerFwf.o TokenizerWs.o connection.o cpp11.o datetime.o grisu3.o init.o parse.o read.o type_convert.o write.o write_delim.o -L/home/hornik/tmp/R/lib -lR installing to /tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/00LOCK-readr/00new/readr/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (readr) ERROR: dependency ‘ggplot2’ is not available for package ‘TLMoments’ * removing ‘/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/TLMoments’ ERROR: dependency ‘ggplot2’ is not available for package ‘cowplot’ * removing ‘/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/cowplot’ ERROR: dependencies ‘TLMoments’, ‘ggplot2’ are not available for package ‘SPEI’ * removing ‘/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/SPEI’ ERROR: dependency ‘ggplot2’ is not available for package ‘WASP’ * removing ‘/tmp/RtmpMkVC4I/RLIBS_2bab317c62ad57/WASP’ ** Processing: /srv/hornik/tmp/CRAN/synthesis.Rcheck/vign_test/synthesis/vignettes/synthesis_files/figure-html/mod1-1.png 864x672 pixels, 3x8 bits/pixel, RGB Input IDAT size = 53772 bytes Input file size = 53922 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 45965 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 45965 Output IDAT size = 45965 bytes (7807 bytes decrease) Output file size = 46043 bytes (7879 bytes = 14.61% decrease) ** Processing: /srv/hornik/tmp/CRAN/synthesis.Rcheck/vign_test/synthesis/vignettes/synthesis_files/figure-html/mod1-2.png 864x672 pixels, 3x8 bits/pixel, RGB Input IDAT size = 103659 bytes Input file size = 103881 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 95872 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 95872 Output IDAT size = 95872 bytes (7787 bytes decrease) Output file size = 95950 bytes (7931 bytes = 7.63% decrease) ** Processing: /srv/hornik/tmp/CRAN/synthesis.Rcheck/vign_test/synthesis/vignettes/synthesis_files/figure-html/mod1-3.png 864x672 pixels, 3x8 bits/pixel, RGB Input IDAT size = 131742 bytes Input file size = 132012 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 119583 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 119583 Output IDAT size = 119583 bytes (12159 bytes decrease) Output file size = 119661 bytes (12351 bytes = 9.36% decrease) ** Processing: /srv/hornik/tmp/CRAN/synthesis.Rcheck/vign_test/synthesis/vignettes/synthesis_files/figure-html/mod6-1.png 864x480 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 81443 bytes Input file size = 82409 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 79340 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 78576 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 64031 zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 63486 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 63486 Output IDAT size = 63486 bytes (17957 bytes decrease) Output file size = 63564 bytes (18845 bytes = 22.87% decrease) ** Processing: /srv/hornik/tmp/CRAN/synthesis.Rcheck/vign_test/synthesis/vignettes/synthesis_files/figure-html/mod2-1.png 864x672 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 21540 bytes Input file size = 22422 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20129 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 20113 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 20113 Output IDAT size = 20113 bytes (1427 bytes decrease) Output file size = 20191 bytes (2231 bytes = 9.95% decrease) ** Processing: /srv/hornik/tmp/CRAN/synthesis.Rcheck/vign_test/synthesis/vignettes/synthesis_files/figure-html/mod2-2.png 864x672 pixels, 3x8 bits/pixel, RGB Input IDAT size = 136303 bytes Input file size = 136573 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 123404 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 123404 Output IDAT size = 123404 bytes (12899 bytes decrease) Output file size = 123482 bytes (13091 bytes = 9.59% decrease) ** Processing: /srv/hornik/tmp/CRAN/synthesis.Rcheck/vign_test/synthesis/vignettes/synthesis_files/figure-html/mod3-1.png 864x384 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 21837 bytes Input file size = 22719 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19672 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 19627 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 19627 Output IDAT size = 19627 bytes (2210 bytes decrease) Output file size = 19705 bytes (3014 bytes = 13.27% decrease) Quitting from lines 228-254 [mod4] (synthesis.Rmd) Error: processing vignette 'synthesis.Rmd' failed with diagnostics: there is no package called 'WASP' --- failed re-building ‘synthesis.Rmd’ SUMMARY: processing the following file failed: ‘synthesis.Rmd’ Error: Vignette re-building failed. Execution halted * checking PDF version of manual ... [3s/3s] OK * checking HTML version of manual ... [1s/1s] OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 1 ERROR, 2 NOTEs