* using log directory ‘/srv/hornik/tmp/CRAN_pretest/swdpwr.Rcheck’ * using R Under development (unstable) (2024-09-28 r87201) * using platform: x86_64-pc-linux-gnu * R was compiled by Debian clang version 18.1.8 (9) Debian flang-new version 18.1.8 (9) * running under: Debian GNU/Linux trixie/sid * using session charset: UTF-8 * checking for file ‘swdpwr/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘swdpwr’ version ‘1.10’ * package encoding: UTF-8 * checking CRAN incoming feasibility ... [4s/6s] NOTE Maintainer: ‘Jiachen Chen ’ No Authors@R field in DESCRIPTION. Please add one, modifying Authors@R: c(person(given = "Jiachen", family = "Chen", role = c("cre", "aut"), email = "jiachen.chen322@gmail.com"), person(given = "Xin", family = "Zhou", role = "aut"), person(given = "Fan", family = "Li", role = "aut"), person(given = "Donna", family = "Spiegelman.", role = "aut")) as necessary. Found the following (possibly) invalid URLs: URL: https://ysph.yale.edu/cmips/research/software/swdpwr/ From: DESCRIPTION Status: 404 Message: Not Found * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking serialization versions ... OK * checking whether package ‘swdpwr’ can be installed ... [12s/11s] OK * used C compiler: ‘Debian clang version 18.1.8 (11)’ * used Fortran compiler: ‘Debian flang-new version 18.1.8 (11)’ * checking package directory ... OK * checking for future file timestamps ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [1s/1s] OK * checking whether the package can be loaded with stated dependencies ... [1s/1s] OK * checking whether the package can be unloaded cleanly ... [1s/1s] OK * checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK * checking whether the namespace can be unloaded cleanly ... [1s/1s] OK * checking loading without being on the library search path ... [1s/1s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... WARNING Foreign function calls without 'PACKAGE' argument: .Fortran("computeparameter", ...) .Fortran("computeparameter", ...) .Fortran("computeparameter", ...) .Fortran("computeparameter", ...) .Fortran("legendrehandle", ...) .Fortran("legendrehandle", ...) .Fortran("LinearPowertimewrapper", ...) .Fortran("computeparameterlog", ...) .Fortran("computeparameterlog", ...) .Fortran("computeparameterlog", ...) .Fortran("computeparameterlog", ...) .Fortran("legendrehandle", ...) .Fortran("legendrehandle", ...) .Fortran("LogPowertimewrapper", ...) .Fortran("HERZO", ...) .Fortran("HERZO", ...) .Fortran("computeparameterlogit", ...) .Fortran("computeparameterlogit", ...) .Fortran("computeparameterlogit", ...) .Fortran("computeparameterlogit", ...) .Fortran("LogitPowertimewrapper", ...) .Fortran("computeparameter", ...) .Fortran("computeparameter", ...) .Fortran("computeparameter", ...) .Fortran("legendrehandle", ...) .Fortran("legendrehandle", ...) .Fortran("LinearPowernotimewrapper", ...) .Fortran("computeparameterlog", ...) .Fortran("computeparameterlog", ...) .Fortran("computeparameterlog", ...) .Fortran("legendrehandle", ...) .Fortran("legendrehandle", ...) .Fortran("LogPowernotimewrapper", ...) .Fortran("HERZO", ...) .Fortran("HERZO", ...) .Fortran("computeparameterlogit", ...) .Fortran("computeparameterlogit", ...) .Fortran("computeparameterlogit", ...) .Fortran("LogitPowernotimewrapper", ...) .Fortran("computeparameter", ...) .Fortran("computeparameter", ...) .Fortran("computeparameter", ...) .Fortran("computeparameter", ...) .Fortran("LinearPowerGEEwrapper", ...) .Fortran("computeparameterGEElog", ...) .Fortran("computeparameterGEElog", ...) .Fortran("computeparameterGEElog", ...) .Fortran("computeparameterGEElog", ...) .Fortran("LogPowerGEEwrapper", ...) .Fortran("computeparameterGEElogit", ...) .Fortran("computeparameterGEElogit", ...) .Fortran("computeparameterGEElogit", ...) .Fortran("computeparameterGEElogit", ...) .Fortran("LogitPowerGEEwrapper", ...) .Fortran("computeparameter", ...) .Fortran("computeparameter", ...) .Fortran("computeparameter", ...) .Fortran("computeparameter", ...) .Fortran("LinearPowerGEEnotimewrapper", ...) .Fortran("computeparameterGEElog", ...) .Fortran("computeparameterGEElog", ...) .Fortran("computeparameterGEElog", ...) .Fortran("computeparameterGEElog", ...) .Fortran("LogPowerGEEnotimewrapper", ...) .Fortran("computeparameterGEElogit", ...) .Fortran("computeparameterGEElogit", ...) .Fortran("computeparameterGEElogit", ...) .Fortran("computeparameterGEElogit", ...) .Fortran("LogitPowerGEEnotimewrapper", ...) .Fortran("computeparameter", ...) .Fortran("computeparameter", ...) .Fortran("computeparameter", ...) .Fortran("computeparameter", ...) .Fortran("ContinuousPowerGEEtimewrapper", ...) .Fortran("computeparameter", ...) .Fortran("computeparameter", ...) .Fortran("computeparameter", ...) .Fortran("computeparameter", ...) .Fortran("ContinuousPowerGEEnotimewrapper", ...) See chapter ‘System and foreign language interfaces’ in the ‘Writing R Extensions’ manual. * checking R code for possible problems ... [7s/7s] OK * checking Rd files ... [0s/0s] OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... ERROR Warning: parse error in file 'lines': 4: unexpected symbol 85: #specify meanresponse_start, meanresponse_end0 and effectsize_beta assuming time effects. 86: As an ^ ** will not attempt to run examples * checking line endings in C/C++/Fortran sources/headers ... OK * checking pragmas in C/C++ headers and code ... OK * checking compilation flags used ... OK * checking compiled code ... OK * checking usage of KIND in Fortran files ... OK * checking examples ... SKIPPED * checking PDF version of manual ... [3s/2s] OK * checking HTML version of manual ... [0s/0s] OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 1 ERROR, 1 WARNING, 1 NOTE