Package: ahMLE Check: whether package can be installed New result: NOTE Found the following notes/warnings: SystemRequirements specified C++11: support will be removed soon See ‘/home/hornik/tmp/CRAN_recheck/ahMLE.Rcheck/00install.out’ for details. Used C++ compiler: ‘g++-15 (Debian 15.2.0-11) 15.2.0’ Package: bayesCureRateModel Check: for code/documentation mismatches New result: WARNING Codoc mismatches from Rd file 'Surv.Rd': Surv Code: function(time, time2, event, type = c("right", "left", "interval", "counting", "interval2"), origin = 0) Docs: function(time, time2, event, type = c("right", "left", "interval", "counting", "interval2", "mstate"), origin = 0) Mismatches in argument default values: Name: 'type' Code: c("right", "left", "interval", "counting", "interval2") Docs: c("right", "left", "interval", "counting", "interval2", "mstate") Package: crane Check: tests New result: ERROR Running ‘testthat.R’ [212s/108s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(crane) Loading required package: gtsummary > > test_check("crane") Starting 2 test processes. > test-tbl_shift.R: i Converting column "ANRIND" to a factor. Saving _problems/test-tbl_survfit_quantiles-106.R [ FAIL 1 | WARN 0 | SKIP 41 | PASS 76 ] ══ Skipped tests (41) ══════════════════════════════════════════════════════════ • On CRAN (41): 'test-add_blank_rows.R:73:1', 'test-add_blank_rows.R:99:1', 'test-add_difference_row.R:10:1', 'test-add_difference_row.R:52:1', 'test-add_hierarchical_count_row.R:1:1', 'test-add_hierarchical_count_row.R:37:1', 'test-modify_zero_recode.R:1:1', 'test-tbl_hierarchical_rate_and_count.R:1:1', 'test-tbl_hierarchical_rate_by_grade.R:1:1', 'test-tbl_listing.R:6:1', 'test-tbl_listing.R:12:1', 'test-tbl_listing.R:31:1', 'test-tbl_listing.R:42:1', 'test-tbl_listing.R:57:1', 'test-tbl_listing.R:70:1', 'test-tbl_listing.R:89:1', 'test-tbl_listing.R:98:1', 'test-tbl_roche_summary.R:14:1', 'test-tbl_roche_summary.R:85:1', 'test-tbl_shift.R:23:1', 'test-tbl_shift.R:53:1', 'test-tbl_shift.R:72:1', 'test-tbl_shift.R:89:1', 'test-tbl_shift.R:124:1', 'test-tbl_shift.R:159:1', 'test-tbl_survfit_quantiles.R:3:1', 'test-tbl_survfit_quantiles.R:53:1', 'test-tbl_survfit_quantiles.R:73:1', 'test-tbl_survfit_quantiles.R:109:1', 'test-tbl_baseline_chg.R:12:1', 'test-tbl_baseline_chg.R:42:1', 'test-tbl_baseline_chg.R:56:1', 'test-tbl_baseline_chg.R:73:1', 'test-tbl_baseline_chg.R:104:1', 'test-tbl_baseline_chg.R:155:1', 'test-tbl_baseline_chg.R:170:1', 'test-tbl_survfit_times.R:3:1', 'test-tbl_survfit_times.R:57:1', 'test-tbl_survfit_times.R:79:1', 'test-theme_gtsummary_roche.R:1:1', 'test-theme_gtsummary_roche.R:8:1' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-tbl_survfit_quantiles.R:87:3'): tbl_survfit_quantiles(method.args) ── Error in `tbl_survfit_quantiles(data = cards::ADTTE, by = "TRTA", method.args = list(conf.int = 0.9, conf.type = "logit"))`: There was an error evaluating the model `survfit(formula = survival::Surv(time = AVAL, event = 1 - CNSR, type = "right", origin = 0) ~ T ...` Caused by error in `ifelse()`: ! argument "no" is missing, with no default Backtrace: ▆ 1. ├─testthat::expect_equal(...) at test-tbl_survfit_quantiles.R:87:3 2. │ └─testthat::quasi_label(enquo(object), label) 3. │ └─rlang::eval_bare(expr, quo_get_env(quo)) 4. ├─dplyr::select(...) 5. ├─dplyr::mutate(...) 6. ├─dplyr::filter(...) 7. ├─dplyr::filter(...) 8. ├─base::getElement(...) 9. ├─gtsummary::gather_ard(...) 10. │ └─gtsummary:::check_class(x, "gtsummary") 11. ├─crane::tbl_survfit_quantiles(...) 12. │ ├─cards::update_ard_fmt_fun(...) 13. │ │ └─cards:::check_class(x, "card") 14. │ ├─cardx::ard_survival_survfit(...) 15. │ └─cardx:::ard_survival_survfit.data.frame(...) 16. │ ├─cardx::ard_survival_survfit(...) 17. │ ├─cardx::construct_model(...) 18. │ └─cardx:::construct_model.data.frame(...) 19. │ ├─rlang::try_fetch(...) 20. │ │ ├─base::tryCatch(...) 21. │ │ │ └─base (local) tryCatchList(expr, classes, parentenv, handlers) 22. │ │ │ └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]]) 23. │ │ │ └─base (local) doTryCatch(return(expr), name, parentenv, handler) 24. │ │ └─base::withCallingHandlers(...) 25. │ ├─withr::with_namespace(...) 26. │ │ └─base::force(code) 27. │ └─rlang::eval_tidy(call_to_run, env = env) 28. ├─survival::survfit(...) 29. ├─survival::survfit.formula(...) 30. │ └─survival::survfitKM(...) 31. │ └─survival::survfit_confint(...) 32. │ └─base::ifelse(se == 0, 1 - 1/(1 + exp(log(p/(1 - p)) + se2))) 33. └─rlang (local) ``(``) 34. └─handlers[[1L]](cnd) 35. └─cli::cli_abort(message = msg, parent = e, call = get_cli_abort_call()) 36. └─rlang::abort(...) [ FAIL 1 | WARN 0 | SKIP 41 | PASS 76 ] Error: ! Test failures. Execution halted Package: em Check: whether package can be installed New result: NOTE Found the following notes/warnings: SystemRequirements specified C++11: support will be removed soon See ‘/home/hornik/tmp/CRAN_recheck/em.Rcheck/00install.out’ for details. Used C++ compiler: ‘g++-15 (Debian 15.2.0-11) 15.2.0’ Package: flexsurv Check: re-building of vignette outputs New result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘standsurv.Rmd’ using rmarkdown [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘standsurv.Rmd’ --- re-building ‘flexsurv.Rnw’ using knitr --- finished re-building ‘flexsurv.Rnw’ --- re-building ‘multistate.Rnw’ using knitr Quitting from multistate.Rnw:809-821 [unnamed-chunk-30] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error in `dplyr::rename()`: ! Can't rename columns that don't exist. x Column `lower..s0.` doesn't exist. --- Backtrace: x 1. +-flexsurv::ajfit_flexsurvmix(bosfs, start = "No BOS") 2. | \-ajlong %>% ... 3. +-dplyr::rename(...) 4. \-dplyr:::rename.data.frame(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'multistate.Rnw' failed with diagnostics: Can't rename columns that don't exist. ✖ Column `lower..s0.` doesn't exist. --- failed re-building ‘multistate.Rnw’ --- re-building ‘distributions.Rnw’ using Sweave --- finished re-building ‘distributions.Rnw’ --- re-building ‘flexsurv-examples.Rnw’ using Sweave Loading required package: survival Forming integrated rmst function... Forming integrated mean function... Loading required package: TH.data Loading required package: MASS Attaching package: ‘TH.data’ The following object is masked from ‘package:MASS’: geyser --- finished re-building ‘flexsurv-examples.Rnw’ SUMMARY: processing the following file failed: ‘multistate.Rnw’ Error: Vignette re-building failed. Execution halted Package: JointAI Check: for code/documentation mismatches New result: WARNING Codoc mismatches from Rd file 'Surv.Rd': Surv Code: function(time, time2, event, type = c("right", "left", "interval", "counting", "interval2"), origin = 0) Docs: function(time, time2, event, type = c("right", "left", "interval", "counting", "interval2", "mstate"), origin = 0) Mismatches in argument default values: Name: 'type' Code: c("right", "left", "interval", "counting", "interval2") Docs: c("right", "left", "interval", "counting", "interval2", "mstate") Package: lnmixsurv Check: whether package can be installed New result: WARNING Found the following significant warnings: Warning: SystemRequirements: invalid C++ specification ‘C++’ See ‘/home/hornik/tmp/CRAN_recheck/lnmixsurv.Rcheck/00install.out’ for details. Used C++ compiler: ‘g++-15 (Debian 15.2.0-11) 15.2.0’ Package: ordinalgmifs Check: whether package can be installed New result: NOTE Found the following notes/warnings: SystemRequirements specified C++11: support will be removed soon See ‘/home/hornik/tmp/CRAN_recheck/ordinalgmifs.Rcheck/00install.out’ for details. Used C compiler: ‘gcc-15 (Debian 15.2.0-11) 15.2.0’ Package: PenCoxFrail Check: whether package can be installed New result: WARNING Found the following significant warnings: Warning: SystemRequirements: invalid C++ specification ‘C++’ See ‘/home/hornik/tmp/CRAN_recheck/PenCoxFrail.Rcheck/00install.out’ for details. Used C++ compiler: ‘g++-15 (Debian 15.2.0-11) 15.2.0’ Package: rms Check: for code/documentation mismatches New result: WARNING Codoc mismatches from Rd file 'importexport.Rd': Surv Code: function(time, time2, event, type = c("right", "left", "interval", "counting", "interval2"), origin = 0) Docs: function(time, time2, event, type = c("right", "left", "interval", "counting", "interval2", "mstate"), origin = 0) Mismatches in argument default values: Name: 'type' Code: c("right", "left", "interval", "counting", "interval2") Docs: c("right", "left", "interval", "counting", "interval2", "mstate") Package: survSAKK Check: tests New result: ERROR Running ‘testthat.R’ [9s/9s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(survSAKK) > > test_check("survSAKK") Saving _problems/test-surv.plot-9.R Saving _problems/test-surv.plot-45.R Saving _problems/test-surv.plot-61.R Saving _problems/test-surv.plot-68.R Saving _problems/test-surv.plot-73.R Saving _problems/test-surv.plot-77.R Saving _problems/test-surv.plot-81.R Saving _problems/test-surv.plot-88.R Saving _problems/test-surv.plot-95.R Saving _problems/test-surv.plot-102.R Saving _problems/test-surv.plot-106.R Saving _problems/test-surv.plot-110.R Saving _problems/test-surv.plot-114.R Saving _problems/test-surv.plot-126.R Saving _problems/test-surv.plot-132.R Saving _problems/test-surv.plot-138.R Saving _problems/test-surv.plot-144.R Saving _problems/test-surv.plot-150.R Saving _problems/test-surv.plot-156.R Saving _problems/test-surv.plot-162.R Saving _problems/test-surv.plot-170.R Saving _problems/test-surv.plot-177.R Saving _problems/test-surv.plot-181.R Saving _problems/test-surv.plot-185.R Saving _problems/test-surv.plot-189.R Saving _problems/test-surv.plot-196.R Saving _problems/test-surv.plot-201.R Saving _problems/test-surv.plot-207.R Saving _problems/test-surv.plot-213.R Saving _problems/test-surv.plot-219.R Saving _problems/test-surv.plot-224.R Saving _problems/test-surv.plot-229.R Saving _problems/test-surv.plot-234.R Saving _problems/test-surv.plot-239.R Saving _problems/test-surv.plot-244.R Saving _problems/test-surv.plot-249.R Saving _problems/test-surv.plot-260.R Saving _problems/test-surv.plot-272.R Saving _problems/test-surv.plot-281.R Saving _problems/test-surv.plot-291.R Saving _problems/test-surv.plot-295.R Saving _problems/test-surv.plot-303.R Saving _problems/test-surv.plot-310.R Saving _problems/test-surv.plot-317.R Saving _problems/test-surv.plot-324.R Saving _problems/test-surv.plot-330.R Saving _problems/test-surv.plot-336.R Saving _problems/test-surv.plot-342.R Saving _problems/test-surv.plot-349.R Saving _problems/test-surv.plot-355.R Saving _problems/test-surv.plot-362.R Saving _problems/test-surv.plot-370.R Saving _problems/test-surv.plot-377.R Saving _problems/test-surv.plot-385.R Saving _problems/test-surv.plot-392.R Saving _problems/test-surv.plot-399.R Saving _problems/test-surv.plot-405.R Saving _problems/test-surv.plot-412.R Saving _problems/test-surv.plot-427.R Saving _problems/test-surv.plot-461.R Saving _problems/test-surv.plot-473.R Saving _problems/test-surv.plot-479.R Saving _problems/test-surv.plot-485.R Saving _problems/test-surv.plot-492.R Saving _problems/test-surv.plot-499.R Saving _problems/test-surv.plot-507.R Saving _problems/test-surv.plot-514.R Saving _problems/test-surv.plot-521.R Saving _problems/test-surv.plot-564.R Saving _problems/test-surv.plot-572.R Saving _problems/test-surv.plot-581.R Saving _problems/test-surv.plot-592.R Saving _problems/test-surv.plot-598.R Saving _problems/test-surv.plot-604.R Saving _problems/test-surv.plot-610.R Saving _problems/test-surv.plot-617.R Saving _problems/test-surv.plot-625.R [ FAIL 77 | WARN 17 | SKIP 0 | PASS 22 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-surv.plot.R:9:3'): surv.plot can plot without error ────────── Expected `surv.plot(fit = survObject)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:42:3'): surv.plot handles default color assignment ── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:61:11'): Convert y unit into percent. ──────────── Expected `surv.plot(fit = survObject, y.unit = "percent")` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:65:3'): Convert y unit into percent and check label ── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:73:3'): Ensure `segment.quanitle` is handles without error. ── Expected `surv.plot(fit = survObject, segment.quantile = 0.5, segment.type = 1)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:77:3'): Ensure `segment.quanitle` is handles without error. ── Expected `surv.plot(fit = survObject, segment.quantile = 0.5, segment.type = 2)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:81:3'): Ensure `segment.quanitle` is handles without error. ── Expected `surv.plot(fit = survObject, segment.quantile = 0.5, segment.type = 3)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:85:3'): Ensure several `segment.quanitle` and different positions are handles without error. ── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:92:3'): Ensure several `segment.quanitle` and different positions are handles without error. ── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:99:3'): Ensure several `segment.quanitle` and different positions are handles without error. ── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:106:3'): Ensure `segment.timpoint` is handles without error. ── Expected `surv.plot(fit = survObject, segment.timepoint = 360, segment.type = 1)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:110:3'): Ensure `segment.timpoint` is handles without error. ── Expected `surv.plot(fit = survObject, segment.timepoint = 360, segment.type = 2)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:114:3'): Ensure `segment.timpoint` is handles without error. ── Expected `surv.plot(fit = survObject, segment.timepoint = 360, segment.type = 3)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:124:3'): surv.plot throws error for invalid risktable parameter ── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:130:3'): surv.plot throws error for invalid risktable parameter ── Expected `surv.plot(fit = survObject, segment.timepoint = 0.5, segment.annotation = "left")` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:136:3'): surv.plot throws error for invalid risktable parameter ── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:142:3'): surv.plot throws error for invalid risktable parameter ── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:148:3'): surv.plot throws error for invalid risktable parameter ── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:154:3'): surv.plot throws error for invalid risktable parameter ── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:161:3'): Check if risktable colour can be modified ── Expected `surv.plot(fit = survObject, risktable.col = c("red", "yellow"))` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:170:3'): Ensure that legend can be modified manually ── Expected `surv.plot(fit = survObject, legend.name = "legend")` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:177:3'): Check logrank statistics ──────────────── Expected `surv.plot(fit = survObject, stat = "logrank")` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:181:3'): Check coxph statistics ────────────────── Expected `surv.plot(fit = survObject, stat = "coxph", stat.position = "bottomleft")` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:185:3'): Check coxph_logrank statistics ────────── Expected `surv.plot(fit = survObject, stat = "coxph_logrank", stat.position = "topright")` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:189:3'): Check coxph_logrank statistics ────────── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:195:3'): Check if defined theme is executed ────── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:200:3'): Check if defined theme is executed ────── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:205:3'): Check if defined theme is executed ────── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:211:3'): Check if defined theme is executed ────── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:217:3'): Check if defined theme is executed ────── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:223:3'): Check if defined theme is executed ────── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:228:3'): Check if defined theme is executed ────── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:233:3'): Check if defined theme is executed ────── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:238:3'): Check if defined theme is executed ────── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:243:3'): Check if defined theme is executed ────── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:248:3'): Check if defined theme is executed ────── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:260:3'): Setting an invalid grid argument. ─────── Expected `surv.plot(fit = survObject, grid = TRUE)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:272:3'): Check if risktable.title gives a valid output. ── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:281:3'): Check if conf.band.col gives a valid output. ── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:291:3'): Check if conf.band.col gives a valid output. ── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:295:3'): Check if conf.band.col gives a valid output. ── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:301:3'): Check if short annotation works without an error. ── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:307:3'): Check if short annotation works without an error for one arm with segment.main given. ── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:314:3'): Check if short annotation works without an error for more than two arms. ── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:321:3'): Check if short annotation works without an error. ── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:328:3'): Check if short annotation works without an error. ── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:334:3'): Check if CI for segment can be omitted for one arm ── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:340:3'): Check for annotation with only one arm. ── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:346:3'): Check for annotation with only one arm. ── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:353:3'): Check for annotation with only one arm. ── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:359:3'): Check for annotation with only one arm. ── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:366:3'): Check for short annotation with only one arm and segment.main given. ── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:374:3'): Check for short annotation with more than two arms. ── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:381:3'): Check for short annotation with more than two arms in percent. ── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:389:3'): Check for annotation with only one arm. ── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:396:3'): Check for annotation with only one arm. ── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:403:3'): Check for annotation with only one arm. ── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:409:3'): Check for annotation with only one arm. ── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:425:3'): Check if CI with one arm can handle error. ── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:460:3'): Check if other quantile than median can be added. ── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:471:3'): Check several time points and position. ── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:477:3'): Check several time points and position. ── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:483:3'): Check several time points and position. ── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:489:3'): Check segment time point with short annotation with number of arms = 2. ── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:496:3'): Check that time point with short annotation works if arms != 2. ── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:503:3'): Check if time point label works for 'percent' and 'segment.main' given. ── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:511:3'): Check if time point label works for 'percent' and 'segment.main' not given. ── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:518:3'): Check segment time point with long annotation with number of arms = 2. ── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:560:3'): Check segment annotation if several segment timepoint are chosen and y.unit == 'percent'. ── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:568:3'): Check if `letter` on top left can be displayed. ── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:576:3'): Check segment Title if 'segment.main' was specified ── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:590:3'): Check 'stat,position' = 'left'. ───────── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:596:3'): Check 'stat,position' = 'right'. ──────── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:602:3'): Check 'stat,position' = 'bottomright'. ── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:608:3'): Check 'stat.position' = 'top'. ────────── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:614:3'): Check 'stat.fit' if 'reference.arm' is given. ── Expected `surv.plot(...)` to run silently. Actual noise: warnings. ── Failure ('test-surv.plot.R:621:3'): Check 'risktable.col'. ────────────────── Expected `surv.plot(...)` to run silently. Actual noise: warnings. [ FAIL 77 | WARN 17 | SKIP 0 | PASS 22 ] Error: ! Test failures. Execution halted