options(na.action=na.exclude) #preserve length of missings library(survival) # # Check out using a "user specified" distribution # mydist <- c(survreg.distributions$extreme, survreg.distributions$weibull[-1]) mydist$name <- "Weibull2" mydist$dist <- NULL fit1 <- survreg(Surv(time, status) ~ age + ph.ecog, lung) fit2 <- survreg(Surv(time, status) ~ age + ph.ecog, lung, dist=mydist) all.equal(fit1$coef, fit2$coef) all.equal(fit1$var, fit2$var) # # And with an data set containing interval censoring # idat <- read.table('data.interval', skip=3, header=T, sep=',') fit1 <- survreg(Surv(ltime, rtime, type='interval2') ~ age + ecog.ps, idat) fit2 <- survreg(Surv(ltime, rtime, type='interval2') ~ age + ecog.ps, data=idat, dist=mydist) all.equal(fit1$coef, fit2$coef) all.equal(fit1$var, fit2$var) all.equal(fit1$log, fit2$log)