* installing *source* package ‘sundialr’ ...
** using staged installation
checking whether the C++ compiler works... yes
checking for C++ compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether the compiler supports GNU C++... yes
checking whether clang++-19 -std=gnu++17 accepts -g... yes
checking for clang++-19 -std=gnu++17 option to enable C++11 features... none needed
checking how to run the C++ preprocessor... clang++-19 -std=gnu++17 -E
checking whether the compiler supports GNU C++... (cached) yes
checking whether clang++-19 -std=gnu++17 accepts -g... (cached) yes
checking for clang++-19 -std=gnu++17 option to enable C++11 features... (cached) none needed
checking for cmake... /usr/bin/cmake
set CMAKE_BIN=/usr/bin/cmake
trying URL 'https://github.com/LLNL/sundials/releases/download/v7.2.0/sundials-7.2.0.tar.gz'
Content type 'application/octet-stream' length 94348468 bytes (90.0 MB)
===================
downloaded 34.9 MB

Warning in download.file(url = "https://github.com/LLNL/sundials/releases/download/v7.2.0/sundials-7.2.0.tar.gz",  :
  downloaded length 36582199 != reported length 94348468
Warning in download.file(url = "https://github.com/LLNL/sundials/releases/download/v7.2.0/sundials-7.2.0.tar.gz",  :
  URL 'https://objects.githubusercontent.com/github-production-release-asset-2e65be/105918649/555777cc-d942-4795-ac9b-989816606d53?X-Amz-Algorithm=AWS4-HMAC-SHA256&X-Amz-Credential=releaseassetproduction%2F20241215%2Fus-east-1%2Fs3%2Faws4_request&X-Amz-Date=20241215T202614Z&X-Amz-Expires=300&X-Amz-Signature=717b3dd3aaa7c32ea9dd9d6ee6383fdb52dedb22bbd936206fca0b3e09e05985&X-Amz-SignedHeaders=host&response-content-disposition=attachment%3B%20filename%3Dsundials-7.2.0.tar.gz&response-content-type=application%2Foctet-stream': Timeout of 60 seconds was reached
Error in download.file(url = "https://github.com/LLNL/sundials/releases/download/v7.2.0/sundials-7.2.0.tar.gz",  : 
  download from 'https://github.com/LLNL/sundials/releases/download/v7.2.0/sundials-7.2.0.tar.gz' failed
Execution halted

gzip: stdin: unexpected end of file
/usr/bin/tar: Unexpected EOF in archive
/usr/bin/tar: Unexpected EOF in archive
/usr/bin/tar: Error is not recoverable: exiting now
Warning in utils::untar(tarfile = "sundials-7.2.0.tar.gz") :
  '/usr/bin/tar -xf 'sundials-7.2.0.tar.gz'' returned error code 2
set CC=clang-19
set CFLAGS=-I/usr/local/include -fpic -g -O3 -Wall -pedantic
set CXX=clang++-19
set CXXFLAGS=-std=gnu++11 -I/usr/local/include -fpic -g -O3 -Wall -pedantic -Wno-error=enum-constexpr-conversion
set LDFLAGS=-Wl,-O1
-- The C compiler identification is Clang 19.1.5
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/clang-19 - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- SUNDIALS_GIT_VERSION: 
-- Building SUNDIALS in 'Release' mode.
-- Looking for sys/types.h
-- Looking for sys/types.h - found
-- Looking for stdint.h
-- Looking for stdint.h - found
-- Looking for stddef.h
-- Looking for stddef.h - found
-- Check size of int64_t
-- Check size of int64_t - done
-- Using int64_t for indices
-- C standard set to 99
-- C extensions set to ON
-- Performing Test SUNDIALS_C_COMPILER_HAS_BUILTIN_EXPECT
-- Performing Test SUNDIALS_C_COMPILER_HAS_BUILTIN_EXPECT - Success
-- Performing Test SUNDIALS_C_COMPILER_HAS_ATTRIBUTE_ASSUME
-- Performing Test SUNDIALS_C_COMPILER_HAS_ATTRIBUTE_ASSUME - Success
-- Performing Test SUNDIALS_C_COMPILER_HAS_ATTRIBUTE_UNUSED
-- Performing Test SUNDIALS_C_COMPILER_HAS_ATTRIBUTE_UNUSED - Success
-- Looking for POSIX timers... found
-- Performing Test COMPILER_HAS_DEPRECATED_MSG
-- Performing Test COMPILER_HAS_DEPRECATED_MSG - Success
-- Appending C RELEASE flags
-- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY
-- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success
-- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY
-- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY - Success
-- Performing Test COMPILER_HAS_DEPRECATED_ATTR
-- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success
-- Added NVECTOR_SERIAL module
-- Added NVECTOR_MANYVECTOR module
-- Added SUNMATRIX_BAND module
-- Added SUNMATRIX_DENSE module
-- Added SUNMATRIX_SPARSE module
-- Added SUNLINSOL_BAND module
-- Added SUNLINSOL_DENSE module
-- Added SUNLINSOL_PCG module
-- Added SUNLINSOL_SPBCGS module
-- Added SUNLINSOL_SPFGMR module
-- Added SUNLINSOL_SPGMR module
-- Added SUNLINSOL_SPTFQMR module
-- Added SUNNONLINSOL_NEWTON module
-- Added SUNNONLINSOL_FIXEDPOINT module
-- Added ARKODE module
-- Configuring done (3.0s)
-- Generating done (0.1s)
CMake Warning:
  Manually-specified variables were not used by the project:

    BUILD_TESTING


-- Build files have been written to: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/src/sundials-build
[  1%] Building C object src/sundials/CMakeFiles/sundials_core_obj_static.dir/sundials_adaptcontroller.c.o
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Install the project...
-- Install configuration: "Release"

Install shared components

-- Installing: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/lib/libsundials_core.a
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/sundials/sundials_adaptcontroller.h
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/sundials/sundials_band.h
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/sundials/sundials_base.hpp
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/sundials/sundials_context.h
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/sundials/sundials_context.hpp
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/sundials/sundials_convertibleto.hpp
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/sundials/sundials_core.h
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/sundials/sundials_core.hpp
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/sundials/sundials_dense.h
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/sundials/sundials_direct.h
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/sundials/sundials_errors.h
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/sundials/sundials_futils.h
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/sundials/sundials_iterative.h
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/sundials/sundials_linearsolver.h
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/sundials/sundials_linearsolver.hpp
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/sundials/sundials_logger.h
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/sundials/sundials_math.h
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/sundials/sundials_matrix.h
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/sundials/sundials_matrix.hpp
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/sundials/sundials_memory.h
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/sundials/sundials_memory.hpp
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/sundials/sundials_mpi_types.h
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/sundials/sundials_nonlinearsolver.h
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/sundials/sundials_nonlinearsolver.hpp
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/sundials/sundials_nvector.h
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/sundials/sundials_nvector.hpp
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/sundials/sundials_profiler.h
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/sundials/sundials_profiler.hpp
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/sundials/sundials_stepper.h
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/sundials/sundials_types_deprecated.h
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/sundials/sundials_types.h
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/sundials/sundials_version.h
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/sundials/priv/sundials_context_impl.h
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/sundials/priv/sundials_errors_impl.h

Install NVECTOR_SERIAL

-- Installing: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/lib/libsundials_nvecserial.a
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/nvector/nvector_serial.h

Install NVECTOR_MANYVECTOR

-- Installing: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/lib/libsundials_nvecmanyvector.a
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/nvector/nvector_manyvector.h

Install SUNMATRIX_BAND

-- Installing: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/lib/libsundials_sunmatrixband.a
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/sunmatrix/sunmatrix_band.h

Install SUNMATRIX_DENSE

-- Installing: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/lib/libsundials_sunmatrixdense.a
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/sunmatrix/sunmatrix_dense.h

Install SUNMATRIX_SPARSE

-- Installing: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/lib/libsundials_sunmatrixsparse.a
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/sunmatrix/sunmatrix_sparse.h

Install SUNLINSOL_BAND

-- Installing: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/lib/libsundials_sunlinsolband.a
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/sunlinsol/sunlinsol_band.h

Install SUNLINSOL_DENSE

-- Installing: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/lib/libsundials_sunlinsoldense.a
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/sunlinsol/sunlinsol_dense.h

Install SUNLINSOL_PCG

-- Installing: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/lib/libsundials_sunlinsolpcg.a
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/sunlinsol/sunlinsol_pcg.h

Install SUNLINSOL_SPBCGS

-- Installing: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/lib/libsundials_sunlinsolspbcgs.a
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/sunlinsol/sunlinsol_spbcgs.h

Install SUNLINSOL_SPFGMR

-- Installing: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/lib/libsundials_sunlinsolspfgmr.a
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/sunlinsol/sunlinsol_spfgmr.h

Install SUNLINSOL_SPGMR

-- Installing: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/lib/libsundials_sunlinsolspgmr.a
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/sunlinsol/sunlinsol_spgmr.h

Install SUNLINSOL_SPTFQMR

-- Installing: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/lib/libsundials_sunlinsolsptfqmr.a
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/sunlinsol/sunlinsol_sptfqmr.h

Install SUNNONLINSOL_NEWTON

-- Installing: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/lib/libsundials_sunnonlinsolnewton.a
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/sunnonlinsol/sunnonlinsol_newton.h

Install SUNNONLINSOL_FIXEDPOINT

-- Installing: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/lib/libsundials_sunnonlinsolfixedpoint.a
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/sunnonlinsol/sunnonlinsol_fixedpoint.h
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/sunmemory/sunmemory_system.h
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/sunadaptcontroller/sunadaptcontroller_imexgus.h
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/sunadaptcontroller/sunadaptcontroller_soderlind.h
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/sunadaptcontroller/sunadaptcontroller_mrihtol.h

Install ARKODE

-- Installing: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/lib/libsundials_arkode.a
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/arkode/arkode.h
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/arkode/arkode_arkstep.h
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/arkode/arkode_bandpre.h
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/arkode/arkode_bbdpre.h
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/arkode/arkode_butcher.h
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/arkode/arkode_butcher_dirk.h
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/arkode/arkode_butcher_erk.h
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/arkode/arkode_erkstep.h
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/arkode/arkode_forcingstep.h
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/arkode/arkode_ls.h
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/arkode/arkode_lsrkstep.h
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/arkode/arkode_mristep.h
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/arkode/arkode_splittingstep.h
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/arkode/arkode_sprk.h
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/arkode/arkode_sprkstep.h
-- Installing: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/sundials/sundials_export.h
-- Installing: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/sundials/sundials_config.h
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/sundials/LICENSE
-- Up-to-date: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/include/sundials/NOTICE
-- Installing: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/lib/cmake/sundials/SUNDIALSTargets.cmake
-- Installing: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/lib/cmake/sundials/SUNDIALSTargets-release.cmake
-- Installing: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/lib/cmake/sundials/SUNDIALSConfig.cmake
-- Installing: /srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/00_pkg_src/sundialr/inst/lib/cmake/sundials/SUNDIALSConfigVersion.cmake
configure: creating ./config.status
config.status: creating src/Makevars
** libs
using C++ compiler: ‘Debian clang version 19.1.5 (1)’
clang++-19  -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-19/include" -DNDEBUG -I../inst/include/ -I./inst/ -DHAVE_CONFIG_H -DARMA_USE_CXX11 -I./sundials/sundials  -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o
clang++-19  -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-19/include" -DNDEBUG -I../inst/include/ -I./inst/ -DHAVE_CONFIG_H -DARMA_USE_CXX11 -I./sundials/sundials  -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -DR_NO_REMAP -c check_retval.cpp -o check_retval.o
clang++-19  -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-19/include" -DNDEBUG -I../inst/include/ -I./inst/ -DHAVE_CONFIG_H -DARMA_USE_CXX11 -I./sundials/sundials  -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -DR_NO_REMAP -c cvode.cpp -o cvode.o
clang++-19  -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-19/include" -DNDEBUG -I../inst/include/ -I./inst/ -DHAVE_CONFIG_H -DARMA_USE_CXX11 -I./sundials/sundials  -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -DR_NO_REMAP -c cvodes.cpp -o cvodes.o
clang++-19  -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-19/include" -DNDEBUG -I../inst/include/ -I./inst/ -DHAVE_CONFIG_H -DARMA_USE_CXX11 -I./sundials/sundials  -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -DR_NO_REMAP -c cvsolve.cpp -o cvsolve.o
clang++-19  -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-19/include" -DNDEBUG -I../inst/include/ -I./inst/ -DHAVE_CONFIG_H -DARMA_USE_CXX11 -I./sundials/sundials  -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -DR_NO_REMAP -c ida.cpp -o ida.o
clang++-19  -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-19/include" -DNDEBUG -I../inst/include/ -I./inst/ -DHAVE_CONFIG_H -DARMA_USE_CXX11 -I./sundials/sundials  -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -DR_NO_REMAP -c rhs_func.cpp -o rhs_func.o
clang++-19 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-19/lib -Wl,-O1 -o sundialr.so RcppExports.o check_retval.o cvode.o cvodes.o cvsolve.o ida.o rhs_func.o -llapack -L/home/hornik/tmp/R-d-clang-19/lib -lRblas -L/usr/lib/llvm-19/lib -lFortranRuntime -lFortranDecimal -lm -L../inst/lib -L../inst/lib -lsundials_idas -lsundials_cvodes -lsundials_nvecserial -lsundials_sunlinsoldense -lsundials_sunmatrixdense -lsundials_core -lm -L/home/hornik/tmp/R-d-clang-19/lib -lR
/usr/bin/ld: cannot find -lsundials_idas: No such file or directory
/usr/bin/ld: cannot find -lsundials_cvodes: No such file or directory
clang++-19: error: linker command failed with exit code 1 (use -v to see invocation)
make: *** [/home/hornik/tmp/R-d-clang-19/share/make/shlib.mk:10: sundialr.so] Error 1
ERROR: compilation failed for package ‘sundialr’
* removing ‘/srv/hornik/tmp/CRAN_pretest/sundialr.Rcheck/sundialr’