suppressPackageStartupMessages(library(stars)) s5p = system.file("sentinel5p/S5P_NRTI_L2__NO2____20180717T120113_20180717T120613_03932_01_010002_20180717T125231.nc", package = "starsdata") if (s5p != "") { lat_ds = paste0("HDF5:\"", s5p, "\"://PRODUCT/latitude") lon_ds = paste0("HDF5:\"", s5p, "\"://PRODUCT/longitude") nit_ds = paste0("HDF5:\"", s5p, "\"://PRODUCT/SUPPORT_DATA/DETAILED_RESULTS/nitrogendioxide_summed_total_column") lat = read_stars(lat_ds) lon = read_stars(lon_ds) nit = read_stars(nit_ds) nit[[1]][nit[[1]] > 9e+36] = NA ll = setNames(c(lon, lat), c("x", "y")) nit.c0 = st_as_stars(nit, curvilinear = ll) # more direct method: nit.c = read_stars(s5p, sub = "//PRODUCT/SUPPORT_DATA/DETAILED_RESULTS/nitrogendioxide_summed_total_column", curvilinear = c("//PRODUCT/longitude", "//PRODUCT/latitude"), driver = NULL) if (inherits(nit.c[[1]], "units")) nit.c[[1]] = units::drop_units(nit.c[[1]]) nit.c[[1]][nit.c[[1]] > 9e+36] = NA all.equal(nit.c0, nit.c) st_crs(nit.c) = 4326 print(nit.c) if (FALSE && capabilities()["png"]) { png("nit1.png", 800, 800) plot(nit.c, breaks = "equal", reset = FALSE, axes = TRUE, as_points = TRUE, pch = 16) maps::map('world', add = TRUE, col = 'red') dev.off() png("nit2.png", 800, 800) plot(nit.c, breaks = "equal", reset = FALSE, axes = TRUE, as_points = FALSE, border = NA) maps::map('world', add = TRUE, col = 'red') dev.off() nit.c = stars:::st_downsample(nit.c, 8) print(nit.c) png("nit3.png", 800, 800) plot(nit.c, breaks = "equal", reset = FALSE, axes = TRUE, as_points = TRUE, pch = 16) maps::map('world', add = TRUE, col = 'red') dev.off() png("nit4.png", 800, 800) plot(nit.c, breaks = "equal", reset = FALSE, axes = TRUE, as_points = FALSE, border = NA) maps::map('world', add = TRUE, col = 'red') dev.off() } }