test_that("ssdGSA works", { ssdGSA(Data = data_matrix_entrezID, Gene_sets = gene_sets, Direction_matrix = direction_matrix, GSA_weight = "group_weighted", # options are: "equal_weighted" and "group_weighted" GSA_weighted_by = "sum.ES", # options are: "sum.ES", "avg.ES", and "median.ES" GSA_method = "gsva", # options are: gsva", "ssgsea", "zscore", "avg.exprs", and "median.exprs" min.sz = 6, # GSVA parameter max.sz = 2000, # GSVA parameter mx.diff = TRUE # GSVA parameter ) })