* using log directory 'd:/RCompile/CRANincoming/R-devel/spatstat.model.Rcheck' * using R Under development (unstable) (2023-10-22 r85388 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 12.3.0 GNU Fortran (GCC) 12.3.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'spatstat.model/DESCRIPTION' ... OK * this is package 'spatstat.model' version '3.2-7' * checking CRAN incoming feasibility ... [18s] Note_to_CRAN_maintainers Maintainer: 'Adrian Baddeley ' * checking package namespace information ... OK * checking package dependencies ... NOTE Depends: includes the non-default packages: 'spatstat.data', 'spatstat.geom', 'spatstat.random', 'spatstat.explore', 'nlme', 'rpart' Adding so many packages to the search path is excessive and importing selectively is preferable. * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'spatstat.model' can be installed ... OK * used C compiler: 'gcc.exe (GCC) 12.3.0' * checking installed package size ... OK * checking package directory ... OK * checking for future file timestamps ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking whether startup messages can be suppressed ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [70s] OK * checking Rd files ... NOTE checkRd: (-1) cdf.test.mppm.Rd:48: Lost braces 48 | pixel values when code{covariate} is a pixel image. | ^ checkRd: (-1) cdf.test.mppm.Rd:129: Lost braces 129 | how pixel values will be handled when code{covariate} is a pixel image. | ^ checkRd: (-1) ppm.ppp.Rd:470-472: Lost braces in \itemize; meant \describe ? checkRd: (-1) ppm.ppp.Rd:473-481: Lost braces in \itemize; meant \describe ? checkRd: (-1) ppm.ppp.Rd:482-485: Lost braces in \itemize; meant \describe ? checkRd: (-1) quadrat.test.mppm.Rd:67: Lost braces 67 | In the second case, fit the model code{fit2 <- mppm(P, ~id)} | ^ checkRd: (-1) rex.Rd:49: Lost braces 49 | Thus, the default values \code{r=2} and {k=1} imply that the errors in | ^ * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking R/sysdata.rda ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking pragmas in C/C++ headers and code ... OK * checking compilation flags used ... OK * checking compiled code ... OK * checking installed files from 'inst/doc' ... OK * checking examples ... [98s] OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... [87s] OK Running 'testsAtoC.R' Running 'testsD.R' Running 'testsEtoF.R' Running 'testsGtoJ.R' Running 'testsK.R' Running 'testsL.R' [30s] Running 'testsM.R' Running 'testsNtoO.R' Running 'testsP1.R' Running 'testsP2.R' Running 'testsQ.R' Running 'testsR1.R' Running 'testsR2.R' [12s] Running 'testsS.R' Running 'testsT.R' Running 'testsUtoZ.R' * checking PDF version of manual ... [46s] OK * checking HTML version of manual ... [69s] OK * DONE Status: 2 NOTEs