#' #' Header for all (concatenated) test files #' #' Require spatstat.explore #' Obtain environment variable controlling tests. #' #' $Revision: 1.5 $ $Date: 2020/04/30 05:31:37 $ require(spatstat.explore) FULLTEST <- (nchar(Sys.getenv("SPATSTAT_TEST", unset="")) > 0) ALWAYS <- TRUE cat(paste("--------- Executing", if(FULLTEST) "** ALL **" else "**RESTRICTED** subset of", "test code -----------\n")) ## ## tests/rhohat.R ## ## Test all combinations of options for rhohatCalc ## ## $Revision: 1.6 $ $Date: 2022/05/22 08:03:48 $ local({ if(FULLTEST) { X <- rpoispp(function(x,y){exp(3+3*x)}) Z <- as.im(function(x,y) { x }, Window(X)) f <- funxy(function(x,y) { y + 1 }, Window(X)) ## rhohat.ppp ## done in example(rhohat): ## rhoA <- rhohat(X, "x") ## rhoB <- rhohat(X, "x", method="reweight") ## rhoC <- rhohat(X, "x", method="transform") ## alternative smoother (if package locfit available) rhoA <- rhohat(X, "x", smoother="local") rhoB <- rhohat(X, "x", smoother="local", method="reweight") rhoC <- rhohat(X, "x", smoother="local", method="transform") #' code blocks rhoD <- rhohat(X, "y", positiveCI=TRUE) rhoE <- rhohat(X, Z, positiveCI=TRUE) #' weights rhoF <- rhohat(X, Z, weights=f(X)) rhoG <- rhohat(X, Z, weights=f) rhoH <- rhohat(X, Z, weights=as.im(f)) lam <- as.im(function(x,y) {exp(3+2*x)}, W=Window(Z)) ## Baseline rhoAb <- rhohat(X, "x", baseline=lam) rhoBb <- rhohat(X, "x", method="reweight", baseline=lam) rhoCb <- rhohat(X, "x", method="transform", baseline=lam) ## Horvitz-Thompson rhoAH <- rhohat(X, "x", horvitz=TRUE) rhoBH <- rhohat(X, "x", method="reweight", horvitz=TRUE) rhoCH <- rhohat(X, "x", method="transform", horvitz=TRUE) ## class support plot(rhoA) plot(rhoA, rho ~ x, shade=NULL) plot(rhoA, log(rho) ~ x, shade=NULL) plot(rhoA, log(.) ~ x) ## rho2hat r2xy <- rho2hat(X, "x", "y") r2xyw <- rho2hat(X, "x", "y", method="reweight") print(r2xyw) plot(r2xy, do.points=TRUE) xcoord <- function(x,y) x ycoord <- function(x,y) y xim <- as.im(xcoord, W=Window(X)) r2fi <- rho2hat(X, ycoord, xim) r2if <- rho2hat(X, xim, ycoord) } })