* using log directory 'd:/RCompile/CRANincoming/R-devel/sparselink.Rcheck'
* using R Under development (unstable) (2025-05-22 r88223 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 14.2.0
    GNU Fortran (GCC) 14.2.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* checking for file 'sparselink/DESCRIPTION' ... OK
* this is package 'sparselink' version '0.0.1'
* package encoding: UTF-8
* checking CRAN incoming feasibility ... [11s] NOTE
Maintainer: 'Armin Rauschenberger <armin.rauschenberger@lih.lu>'

New submission

Found the following (possibly) invalid DOIs:
  DOI: X
    From: inst/CITATION
    Message: Invalid DOI
  DOI: doi.org/10.21105/joss.01761
    From: man/methods.Rd
    Status: 404
    Message: Not Found

The Title field should be in title case. Current version is:
  'Sparse regression for related problems'
In title case that is:
  'Sparse Regression for Related Problems'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking serialization versions ... OK
* checking whether package 'sparselink' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... NOTE
License components which are templates and need '+ file LICENSE':
  MIT
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... NOTE
Mismatches for methods registered for non-generic:
coef:
  function(object, ...)
coef.sparselink:
  function(object)

coef:
  function(object, ...)
coef.wrap_common:
  function(object)

coef:
  function(object, ...)
coef.wrap_glmtrans:
  function(object)

coef:
  function(object, ...)
coef.wrap_mgaussian:
  function(object)

coef:
  function(object, ...)
coef.wrap_separate:
  function(object)

coef:
  function(object, ...)
coef.wrap_spls:
  function(object)

coef:
  function(object, ...)
coef.wrap_xrnet:
  function(object)

predict:
  function(object, ...)
predict.wrap_common:
  function(object, newx)

predict:
  function(object, ...)
predict.wrap_glmtrans:
  function(object, newx)

predict:
  function(object, ...)
predict.wrap_mgaussian:
  function(object, newx)

predict:
  function(object, ...)
predict.wrap_separate:
  function(object, newx)

predict:
  function(object, ...)
predict.wrap_spls:
  function(object, newx)

predict:
  function(object, ...)
predict.wrap_xrnet:
  function(object, newx)
See section 'Registering S3 methods' in the 'Writing R Extensions'
manual.
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ... [72s] NOTE
Examples with CPU (user + system) or elapsed time > 10s
                    user system elapsed
coef.sparselink    16.51   2.50   19.06
predict.sparselink 15.59   2.16   17.77
sparselink         12.92   0.71   13.71
* checking for unstated dependencies in 'tests' ... OK
* checking tests ... OK
  Running 'testthat.R'
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... [22s] OK
* checking HTML version of manual ... OK
* DONE
Status: 4 NOTEs