* using log directory 'd:/RCompile/CRANincoming/R-devel/spagmix.Rcheck'
* using R Under development (unstable) (2024-05-26 r86629 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 13.2.0
    GNU Fortran (GCC) 13.2.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* checking for file 'spagmix/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'spagmix' version '0.4-0'
* package encoding: UTF-8
* checking CRAN incoming feasibility ... NOTE
Maintainer: 'Tilman M. Davies <tilman.davies@otago.ac.nz>'

New submission

Package was archived on CRAN

Possibly misspelled words in DESCRIPTION:
  Spatio (3:31)

CRAN repository db overrides:
  X-CRAN-Comment: Archived on 2022-05-04 as requires archived package
    'RandomFields'.
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'spagmix' can be installed ... WARNING
Found the following significant warnings:
  Warning: replacing previous import 'spatstat.geom::weighted.median' by 'spatstat.univar::weighted.median' when loading 'spagmix'
  Warning: replacing previous import 'spatstat.geom::integral.density' by 'spatstat.univar::integral.density' when loading 'spagmix'
  Warning: replacing previous import 'spatstat.geom::as.breakpts' by 'spatstat.univar::as.breakpts' when loading 'spagmix'
  Warning: replacing previous import 'spatstat.geom::check.hist.lengths' by 'spatstat.univar::check.hist.lengths' when loading 'spagmix'
  Warning: replacing previous import 'spatstat.geom::hotrod' by 'spatstat.univar::hotrod' when loading 'spagmix'
  Warning: replacing previous import 'spatstat.geom::mean.ewcdf' by 'spatstat.univar::mean.ewcdf' when loading 'spagmix'
  Warning: replacing previous import 'spatstat.geom::breakpts.from.r' by 'spatstat.univar::breakpts.from.r' when loading 'spagmix'
  Warning: replacing previous import 'spatstat.geom::quantile.ewcdf' by 'spatstat.univar::quantile.ewcdf' when loading 'spagmix'
  Warning: replacing previous import 'spatstat.geom::whist' by 'spatstat.univar::whist' when loading 'spagmix'
  Warning: replacing previous import 'spatstat.geom::transformquantiles' by 'spatstat.univar::transformquantiles' when loading 'spagmix'
  Warning: replacing previous import 'spatstat.geom::make.even.breaks' by 'spatstat.univar::make.even.breaks' when loading 'spagmix'
  Warning: replacing previous import 'spatstat.geom::quantilefun.ecdf' by 'spatstat.univar::quantilefun.ecdf' when loading 'spagmix'
  Warning: replacing previous import 'spatstat.geom::weighted.quantile' by 'spatstat.univar::weighted.quantile' when loading 'spagmix'
  Warning: replacing previous import 'spatstat.geom::mean.ecdf' by 'spatstat.univar::mean.ecdf' when loading 'spagmix'
  Warning: replacing previous import 'spatstat.geom::print.ewcdf' by 'spatstat.univar::print.ewcdf' when loading 'spagmix'
  Warning: replacing previous import 'spatstat.geom::quantilefun.interpolatedCDF' by 'spatstat.univar::quantilefun.interpolatedCDF' when loading 'spagmix'
  Warning: replacing previous import 'spatstat.geom::quantilefun.ewcdf' by 'spatstat.univar::quantilefun.ewcdf' when loading 'spagmix'
  Warning: replacing previous import 'spatstat.geom::unnormdensity' by 'spatstat.univar::unnormdensity' when loading 'spagmix'
  Warning: replacing previous import 'spatstat.geom::integral' by 'spatstat.univar::integral' when loading 'spagmix'
  Warning: replacing previous import 'spatstat.geom::quantilefun' by 'spatstat.univar::quantilefun' when loading 'spagmix'
  Warning: replacing previous import 'spatstat.random::indefinteg' by 'spatstat.univar::indefinteg' when loading 'spagmix'
  Warning: replacing previous import 'spatstat.geom::ewcdf' by 'spatstat.univar::ewcdf' when loading 'spagmix'
  Warning: replacing previous import 'spatstat.geom::breakpts' by 'spatstat.univar::breakpts' when loading 'spagmix'
  Warning: replacing previous import 'spatstat.geom::weighted.var' by 'spatstat.univar::weighted.var' when loading 'spagmix'
  Warning: replacing previous import 'spatstat.univar::km.rs' by 'spatstat.explore::km.rs' when loading 'spagmix'
  Warning: replacing previous import 'spatstat.univar::StieltjesCalc.stepfun' by 'spatstat.explore::StieltjesCalc.stepfun' when loading 'spagmix'
  Warning: replacing previous import 'spatstat.univar::kaplan.meier' by 'spatstat.explore::kaplan.meier' when loading 'spagmix'
  Warning: replacing previous import 'spatstat.univar::reduced.sample' by 'spatstat.explore::reduced.sample' when loading 'spagmix'
  Warning: replacing previous import 'spatstat.univar::pkernel' by 'spatstat.explore::pkernel' when loading 'spagmix'
  Warning: replacing previous import 'spatstat.univar::match.kernel' by 'spatstat.explore::match.kernel' when loading 'spagmix'
  Warning: replacing previous import 'spatstat.univar::kernel.squint' by 'spatstat.explore::kernel.squint' when loading 'spagmix'
  Warning: replacing previous import 'spatstat.univar::kernel.moment' by 'spatstat.explore::kernel.moment' when loading 'spagmix'
  Warning: replacing previous import 'spatstat.univar::qkernel' by 'spatstat.explore::qkernel' when loading 'spagmix'
  Warning: replacing previous import 'spatstat.univar::km.rs.opt' by 'spatstat.explore::km.rs.opt' when loading 'spagmix'
  Warning: replacing previous import 'spatstat.univar::rkernel' by 'spatstat.explore::rkernel' when loading 'spagmix'
  Warning: replacing previous import 'spatstat.univar::stieltjes' by 'spatstat.explore::stieltjes' when loading 'spagmix'
  Warning: replacing previous import 'spatstat.univar::CDF' by 'spatstat.explore::CDF' when loading 'spagmix'
  Warning: replacing previous import 'spatstat.univar::CDF.density' by 'spatstat.explore::CDF.density' when loading 'spagmix'
  Warning: replacing previous import 'spatstat.univar::dkernel' by 'spatstat.explore::dkernel' when loading 'spagmix'
  Warning: replacing previous import 'spatstat.univar::kernel.factor' by 'spatstat.explore::kernel.factor' when loading 'spagmix'
  Warning: replacing previous import 'spatstat.univar::quantile.density' by 'spatstat.explore::quantile.density' when loading 'spagmix'
  Warning: replacing previous import 'spatstat.univar::StieltjesCalc' by 'spatstat.explore::StieltjesCalc' when loading 'spagmix'
See 'd:/RCompile/CRANincoming/R-devel/spagmix.Rcheck/00install.out' for details.
* checking installed package size ... OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... OK
* checking PDF version of manual ... [18s] OK
* checking HTML version of manual ... OK
* DONE
Status: 1 WARNING, 1 NOTE