R Under development (unstable) (2023-09-30 r85239 ucrt) -- "Unsuffered Consequences" Copyright (C) 2023 The R Foundation for Statistical Computing Platform: x86_64-w64-mingw32/x64 R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > options("rgdal_show_exportToProj4_warnings"="none") > library(sp) The legacy packages maptools, rgdal, and rgeos, underpinning the sp package, which was just loaded, were retired in October 2023. Please refer to R-spatial evolution reports for details, especially https://r-spatial.org/r/2023/05/15/evolution4.html. It may be desirable to make the sf package available; package maintainers should consider adding sf to Suggests:. > data(meuse.grid) > x = meuse.grid > coordinates(x) = c("x", "y") > gridded(x) = TRUE > gridded(x) [1] TRUE > image(x["dist"]) > > fullgrid(x) = TRUE > fullgrid(x) [1] TRUE > summary(x) Object of class SpatialGridDataFrame Coordinates: min max x 178440 181560 y 329600 333760 Is projected: NA proj4string : [NA] Grid attributes: cellcentre.offset cellsize cells.dim x 178460 40 78 y 329620 40 104 Data attributes: part.a part.b dist soil ffreq Min. :0.000 Min. :0.000 Min. :0.000 1 :1665 1 : 779 1st Qu.:0.000 1st Qu.:0.000 1st Qu.:0.119 2 :1084 2 :1335 Median :0.000 Median :1.000 Median :0.272 3 : 354 3 : 989 Mean :0.399 Mean :0.601 Mean :0.297 NA's:5009 NA's:5009 3rd Qu.:1.000 3rd Qu.:1.000 3rd Qu.:0.440 Max. :1.000 Max. :1.000 Max. :0.993 NA's :5009 NA's :5009 NA's :5009 > gridparameters(x) cellcentre.offset cellsize cells.dim x 178460 40 78 y 329620 40 104 > class(as(x, "matrix")) [1] "matrix" "array" Warning message: In as.matrix.SpatialGridDataFrame(from) : as.matrix.SpatialGridDataFrame uses first column; use subset or [] for other columns > > fullgrid(x) = FALSE > fullgrid(x) [1] FALSE > summary(x) Object of class SpatialPixelsDataFrame Coordinates: min max x 178440 181560 y 329600 333760 Is projected: NA proj4string : [NA] Number of points: 3103 Grid attributes: cellcentre.offset cellsize cells.dim x 178460 40 78 y 329620 40 104 Data attributes: part.a part.b dist soil ffreq Min. :0.0000 Min. :0.0000 Min. :0.0000 1:1665 1: 779 1st Qu.:0.0000 1st Qu.:0.0000 1st Qu.:0.1193 2:1084 2:1335 Median :0.0000 Median :1.0000 Median :0.2715 3: 354 3: 989 Mean :0.3986 Mean :0.6014 Mean :0.2971 3rd Qu.:1.0000 3rd Qu.:1.0000 3rd Qu.:0.4402 Max. :1.0000 Max. :1.0000 Max. :0.9926 > class(as(x, "matrix")) [1] "matrix" "array" Warning message: In as.matrix.SpatialGridDataFrame(x, ...) : as.matrix.SpatialGridDataFrame uses first column; use subset or [] for other columns > gridparameters(x) cellcentre.offset cellsize cells.dim x 178460 40 78 y 329620 40 104 > > df = data.frame(z = c(1:6,NA,8,9), + xc = c(1,1,1,2,2,2,3,3,3), + yc = c(rep(c(0, 1.5, 3),3))) > > coordinates(df) = ~xc+yc > gridded(df) = TRUE > gridparameters(df) cellcentre.offset cellsize cells.dim xc 1 1.0 3 yc 0 1.5 3 > as(df, "matrix") [,1] [,2] [,3] [1,] 3 2 1 [2,] 6 5 4 [3,] 9 8 NA > > # get grid topology: > grd = points2grid(as(df, "SpatialPoints"), 1e-31) > grd xc yc cellcentre.offset 1 0.0 cellsize 1 1.5 cells.dim 3 3.0 > getGridIndex(coordinates(df), grd) [1] 7 4 1 8 5 2 9 6 3 > > g = SpatialGrid(grid = grd) > fullgrid(g) [1] TRUE > fullgrid(g) = TRUE > class(g) [1] "SpatialGrid" attr(,"package") [1] "sp" > # the next one has to fail: > fullgrid(g) <- FALSE > class(g) [1] "SpatialPixels" attr(,"package") [1] "sp" > > print(summary(df)) Object of class SpatialPixelsDataFrame Coordinates: min max xc 0.50 3.50 yc -0.75 3.75 Is projected: NA proj4string : [NA] Number of points: 9 Grid attributes: cellcentre.offset cellsize cells.dim xc 1 1.0 3 yc 0 1.5 3 Data attributes: z Min. :1.00 1st Qu.:2.75 Median :4.50 Mean :4.75 3rd Qu.:6.50 Max. :9.00 NA's :1 > image(df["z"]) > as.image.SpatialGridDataFrame(df) $x [1] 1 2 3 $y [1] 0.0 1.5 3.0 $z [,1] [,2] [,3] [1,] 1 2 3 [2,] 4 5 6 [3,] NA 8 9 > as.image.SpatialGridDataFrame(df["z"]) $x [1] 1 2 3 $y [1] 0.0 1.5 3.0 $z [,1] [,2] [,3] [1,] 1 2 3 [2,] 4 5 6 [3,] NA 8 9 > coordinatevalues(getGridTopology(df)) $xc [1] 1 2 3 $yc [1] 3.0 1.5 0.0 > > as.data.frame(df) z xc yc 1 1 1 0.0 2 2 1 1.5 3 3 1 3.0 4 4 2 0.0 5 5 2 1.5 6 6 2 3.0 7 NA 3 0.0 8 8 3 1.5 9 9 3 3.0 > > fullgrid(df) = TRUE > as.data.frame(df) z xc yc 1 3 1 3.0 2 6 2 3.0 3 9 3 3.0 4 2 1 1.5 5 5 2 1.5 6 8 3 1.5 7 1 1 0.0 8 4 2 0.0 > > fullgrid(df) = FALSE > as.data.frame(df) z xc yc 1 3 1 3.0 2 6 2 3.0 3 9 3 3.0 4 2 1 1.5 5 5 2 1.5 6 8 3 1.5 7 1 1 0.0 8 4 2 0.0 > > fullgrid(df) = TRUE > fullgrid(df) = FALSE > as.data.frame(df) z xc yc 1 3 1 3.0 2 6 2 3.0 3 9 3 3.0 4 2 1 1.5 5 5 2 1.5 6 8 3 1.5 7 1 1 0.0 8 4 2 0.0 > > df = as.data.frame(df) > set.seed(133331) > df$xc = df$xc + rep(.001*rnorm(3), 3)[1:8] > df.sp = SpatialPoints(df[c("xc", "yc")]) > df.grd = SpatialPixels(df.sp, tolerance = .01) > df.grd[1:4,,tolerance=.01,drop=TRUE] Object of class SpatialPixels Grid topology: cellcentre.offset cellsize cells.dim xc 1.000433 0.9995197 3 yc 1.500000 1.5000000 2 SpatialPoints: xc yc 1 1.000433 3.0 2 1.997926 3.0 3 2.999472 3.0 4 1.000433 1.5 Coordinate Reference System (CRS) arguments: NA > df.grd[1:4,,tolerance=.01] Object of class SpatialPixels Grid topology: cellcentre.offset cellsize cells.dim xc 1.000433 0.9995197 3 yc 0.000000 1.5000000 3 SpatialPoints: xc yc 1 1.000433 3.0 2 1.997926 3.0 3 2.999472 3.0 4 1.000433 1.5 Coordinate Reference System (CRS) arguments: NA > > proc.time() user system elapsed 0.85 0.06 0.90