downloading reverse dependencies ‘praatpicture’, ‘voiceR’, ‘warbleR’ trying URL 'file:///data/Repositories/CRAN/src/contrib/praatpicture_1.7.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/voiceR_0.1.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/warbleR_1.1.37.tar.gz' installing dependencies ‘bioacoustics’, ‘emuR’, ‘ipa’, ‘monitoR’, ‘NatureSounds’, ‘phia’, ‘phonTools’, ‘rcompanion’, ‘rPraat’, ‘Sim.DiffProc’, ‘soundgen’, ‘wrassp’ begin installing package ‘phonTools’ begin installing package ‘rPraat’ begin installing package ‘ipa’ begin installing package ‘wrassp’ begin installing package ‘phia’ begin installing package ‘rcompanion’ begin installing package ‘NatureSounds’ begin installing package ‘monitoR’ begin installing package ‘bioacoustics’ begin installing package ‘Sim.DiffProc’ * installing *source* package ‘ipa’ ... ** this is package ‘ipa’ version ‘0.1.0’ ** package ‘ipa’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ipa) * installing *source* package ‘NatureSounds’ ... ** this is package ‘NatureSounds’ version ‘1.0.5’ ** package ‘NatureSounds’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (NatureSounds) * installing *source* package ‘phonTools’ ... ** this is package ‘phonTools’ version ‘0.2-2.2’ ** package ‘phonTools’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (phonTools) begin installing package ‘soundgen’ * installing *source* package ‘phia’ ... ** this is package ‘phia’ version ‘0.3-2’ ** package ‘phia’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (phia) * installing *source* package ‘monitoR’ ... ** this is package ‘monitoR’ version ‘1.2’ ** package ‘monitoR’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (monitoR) * installing *source* package ‘rPraat’ ... ** this is package ‘rPraat’ version ‘1.3.2-1’ ** package ‘rPraat’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rPraat) * installing *source* package ‘rcompanion’ ... ** this is package ‘rcompanion’ version ‘2.5.1’ ** package ‘rcompanion’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rcompanion) * installing *source* package ‘wrassp’ ... ** this is package ‘wrassp’ version ‘1.0.5’ ** package ‘wrassp’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-9) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpkNDqqG/R.INSTALL2914d14d27ae1/wrassp/src' gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/acf.c -o assp/acf.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/dataobj.c -o assp/dataobj.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/freqconv.c -o assp/freqconv.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/mhs.c -o assp/mhs.o assp/mhs.c: In function ‘computeMHS’: assp/mhs.c:448:12: warning: variable ‘FILE_IN’ set but not used [-Wunused-but-set-variable] 448 | int FILE_IN, FILE_OUT, CREATED, VOICED; | ^~~~~~~ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/smp2dur.c -o assp/smp2dur.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/asspana.c -o assp/asspana.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/diff.c -o assp/diff.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/headers.c -o assp/headers.o In file included from assp/headers.c:58: /home/hornik/tmp/R-d-gcc-15/include/R_ext/PrtUtil.h:35:2: warning: #warning non-API header file R_ext/PrtUtil.h is obsolete and will be removed [-Wcpp] 35 | #warning non-API header file R_ext/PrtUtil.h is obsolete and will be removed | ^~~~~~~ assp/headers.c: In function ‘getAIFhdr’: assp/headers.c:882:12: warning: variable ‘blockSize’ set but not used [-Wunused-but-set-variable] 882 | uint32_t blockSize; | ^~~~~~~~~ assp/headers.c: In function ‘getCSLhdr’: assp/headers.c:1231:12: warning: variable ‘peakMag’ set but not used [-Wunused-but-set-variable] 1231 | int16_t peakMag; | ^~~~~~~ assp/headers.c: In function ‘getWAVhdr’: assp/headers.c:1828:22: warning: variable ‘lspPosMask’ set but not used [-Wunused-but-set-variable] 1828 | uint32_t byteRate, lspPosMask; | ^~~~~~~~~~ assp/headers.c:1828:12: warning: variable ‘byteRate’ set but not used [-Wunused-but-set-variable] 1828 | uint32_t byteRate, lspPosMask; | ^~~~~~~~ assp/headers.c: In function ‘putSSFFhdr’: assp/headers.c:2824:7: warning: unused variable ‘prev_header_length’ [-Wunused-variable] 2824 | int prev_header_length = strlen(header); | ^~~~~~~~~~~~~~~~~~ assp/headers.c: At top level: assp/headers.c:875:11: warning: ‘getAIFhdr’ defined but not used [-Wunused-function] 875 | LOCAL int getAIFhdr(DOBJ *dop) | ^~~~~~~~~ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/miscstring.c -o assp/miscstring.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/spectra.c -o assp/spectra.o assp/spectra.c: In function ‘freeSPECT_GD’: assp/spectra.c:734:13: warning: unused variable ‘gd’ [-Wunused-variable] 734 | SPECT_GD *gd; | ^~ assp/spectra.c: In function ‘getCepstrum’: assp/spectra.c:932:23: warning: unused variable ‘M’ [-Wunused-variable] 932 | register long n, N, M, L; | ^ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/asspfio.c -o assp/asspfio.o In file included from assp/asspfio.c:49: /home/hornik/tmp/R-d-gcc-15/include/R_ext/PrtUtil.h:35:2: warning: #warning non-API header file R_ext/PrtUtil.h is obsolete and will be removed [-Wcpp] 35 | #warning non-API header file R_ext/PrtUtil.h is obsolete and will be removed | ^~~~~~~ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/dsputils.c -o assp/dsputils.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/isgerman.c -o assp/isgerman.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/myrand.c -o assp/myrand.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/statistics.c -o assp/statistics.o assp/statistics.c: In function ‘statPrintHist’: assp/statistics.c:478:10: warning: unused variable ‘centre’ [-Wunused-variable] 478 | double centre; | ^~~~~~ assp/statistics.c:477:10: warning: unused variable ‘i’ [-Wunused-variable] 477 | size_t i; | ^ assp/statistics.c:476:14: warning: unused variable ‘nd1’ [-Wunused-variable] 476 | int nd, nd1; | ^~~ assp/statistics.c:476:10: warning: unused variable ‘nd’ [-Wunused-variable] 476 | int nd, nd1; | ^~ assp/statistics.c:475:10: warning: unused variable ‘format’ [-Wunused-variable] 475 | char format[32]; | ^~~~~~ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/asspmess.c -o assp/asspmess.o assp/asspmess.c: In function ‘prtAsspMsg’: assp/asspmess.c:169:9: warning: unused variable ‘funcVal’ [-Wunused-variable] 169 | int funcVal; | ^~~~~~~ assp/asspmess.c:168:20: warning: unused variable ‘indent’ [-Wunused-variable] 168 | char *msg, *bug, indent[16]; | ^~~~~~ assp/asspmess.c:168:15: warning: unused variable ‘bug’ [-Wunused-variable] 168 | char *msg, *bug, indent[16]; | ^~~ assp/asspmess.c:168:9: warning: unused variable ‘msg’ [-Wunused-variable] 168 | char *msg, *bug, indent[16]; | ^~~ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/fft.c -o assp/fft.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/ksv.c -o assp/ksv.o assp/ksv.c: In function ‘computeKSV’: assp/ksv.c:503:20: warning: unused variable ‘n’ [-Wunused-variable] 503 | int err, nd, n, type; | ^ assp/ksv.c:503:16: warning: unused variable ‘nd’ [-Wunused-variable] 503 | int err, nd, n, type; | ^~ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/myrint.c -o assp/myrint.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/trace.c -o assp/trace.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/aucheck.c -o assp/aucheck.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/fgetl.c -o assp/fgetl.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/labelobj.c -o assp/labelobj.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/numdecim.c -o assp/numdecim.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/winfuncs.c -o assp/winfuncs.o assp/winfuncs.c: In function ‘listWFs’: assp/winfuncs.c:1139:11: warning: unused variable ‘specs’ [-Wunused-variable] 1139 | WFDATA *specs; | ^~~~~ assp/winfuncs.c:1138:11: warning: unused variable ‘wPtr’ [-Wunused-variable] 1138 | WFLIST *wPtr; | ^~~~ assp/winfuncs.c:1137:14: warning: unused variable ‘m’ [-Wunused-variable] 1137 | int l, m; | ^ assp/winfuncs.c:1137:11: warning: unused variable ‘l’ [-Wunused-variable] 1137 | int l, m; | ^ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/auconv.c -o assp/auconv.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/filter.c -o assp/filter.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/lpc.c -o assp/lpc.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/parsepath.c -o assp/parsepath.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/zcr.c -o assp/zcr.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/bitarray.c -o assp/bitarray.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/filters.c -o assp/filters.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/math.c -o assp/math.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/rfc.c -o assp/rfc.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/chain.c -o assp/chain.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/fmt.c -o assp/fmt.o assp/fmt.c:1795:11: warning: ‘printRaw’ defined but not used [-Wunused-function] 1795 | LOCAL int printRaw(FMTDATA *fPtr, long frameNr, int numFMT, DOBJ *dop) | ^~~~~~~~ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/memswab.c -o assp/memswab.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/rms.c -o assp/rms.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c dataobj.c -o dataobj.o In file included from dataobj.c:8: /home/hornik/tmp/R-d-gcc-15/include/R_ext/PrtUtil.h:35:2: warning: #warning non-API header file R_ext/PrtUtil.h is obsolete and will be removed [-Wcpp] 35 | #warning non-API header file R_ext/PrtUtil.h is obsolete and will be removed | ^~~~~~~ dataobj.c: In function ‘dobj2AsspDataObj’: dataobj.c:170:21: warning: unused variable ‘genVar’ [-Wunused-variable] 170 | TSSFF_Generic *genVar = NULL; | ^~~~~~ dataobj.c: In function ‘getDObjTrackData’: dataobj.c:405:21: warning: variable ‘i8Ptr’ set but not used [-Wunused-but-set-variable] 405 | int8_t *i8Ptr; | ^~~~~ dataobj.c:397:21: warning: variable ‘i’ set but not used [-Wunused-but-set-variable] 397 | int i, | ^ dataobj.c: In function ‘sexp2dobj’: dataobj.c:608:21: warning: unused variable ‘varNames’ [-Wunused-variable] 608 | varNames; | ^~~~~~~~ dataobj.c:602:21: warning: unused variable ‘numFields’ [-Wunused-variable] 602 | size_t numFields = -1; | ^~~~~~~~~ dataobj.c: In function ‘addTrackData’: dataobj.c:894:21: warning: variable ‘i8Ptr’ set but not used [-Wunused-but-set-variable] 894 | int8_t *i8Ptr; | ^~~~~ dataobj.c:886:21: warning: variable ‘i’ set but not used [-Wunused-but-set-variable] 886 | int i, | ^ dataobj.c: At top level: dataobj.c:142:1: warning: ‘DObjFinalizer’ defined but not used [-Wunused-function] 142 | DObjFinalizer(SEXP dPtr) | ^~~~~~~~~~~~~ dataobj.c: In function ‘getDObjTrackData’: dataobj.c:413:21: warning: ‘Rans’ may be used uninitialized [-Wmaybe-uninitialized] 413 | double *Rans; | ^~~~ dataobj.c:414:21: warning: ‘Ians’ may be used uninitialized [-Wmaybe-uninitialized] 414 | int *Ians; | ^~~~ dataobj.c:404:21: warning: ‘u8Ptr’ may be used uninitialized [-Wmaybe-uninitialized] 404 | uint8_t *u8Ptr; | ^~~~~ dataobj.c: In function ‘addTrackData’: dataobj.c:933:30: warning: ‘u8Ptr’ may be used uninitialized [-Wmaybe-uninitialized] 933 | u8Ptr[n] = (int8_t) numPtr[m + n * dop->numRecords]; | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ dataobj.c:893:21: note: ‘u8Ptr’ was declared here 893 | uint8_t *u8Ptr; | ^~~~~ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c performAssp.c -o performAssp.o In file included from performAssp.c:15: /home/hornik/tmp/R-d-gcc-15/include/R_ext/PrtUtil.h:35:2: warning: #warning non-API header file R_ext/PrtUtil.h is obsolete and will be removed [-Wcpp] 35 | #warning non-API header file R_ext/PrtUtil.h is obsolete and will be removed | ^~~~~~~ performAssp.c: In function ‘computeFilter’: performAssp.c:1231:21: warning: variable ‘FILE_IN’ set but not used [-Wunused-but-set-variable] 1231 | int FILE_IN, | ^~~~~~~ In file included from wrassp.h:5, from performAssp.c:1: performAssp.c: In function ‘performAssp’: /home/hornik/tmp/R-d-gcc-15/include/Rinternals.h:924:33: warning: ‘utilsPackage’ may be used uninitialized [-Wmaybe-uninitialized] 924 | #define eval Rf_eval performAssp.c:1188:13: note: in expansion of macro ‘eval’ 1188 | eval(R_fcall3, utilsPackage); | ^~~~ performAssp.c:490:9: note: ‘utilsPackage’ was declared here 490 | utilsPackage, /* to update the prograssbar */ | ^~~~~~~~~~~~ performAssp.c:1187:28: warning: ‘newVal’ may be used uninitialized [-Wmaybe-uninitialized] 1187 | INTEGER(newVal)[0] = i + 1; | ^ performAssp.c:491:9: note: ‘newVal’ was declared here 491 | newVal, | ^~~~~~ performAssp.c:1217:12: warning: ‘res’ may be used uninitialized [-Wmaybe-uninitialized] 1217 | return res; | ^~~ performAssp.c:488:21: note: ‘res’ was declared here 488 | res, | ^~~ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c types.c -o types.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c wrassp_init.c -o wrassp_init.o gcc-15 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o wrassp.so assp/acf.o assp/dataobj.o assp/freqconv.o assp/mhs.o assp/smp2dur.o assp/asspana.o assp/diff.o assp/headers.o assp/miscstring.o assp/spectra.o assp/asspfio.o assp/dsputils.o assp/isgerman.o assp/myrand.o assp/statistics.o assp/asspmess.o assp/fft.o assp/ksv.o assp/myrint.o assp/trace.o assp/aucheck.o assp/fgetl.o assp/labelobj.o assp/numdecim.o assp/winfuncs.o assp/auconv.o assp/filter.o assp/lpc.o assp/parsepath.o assp/zcr.o assp/bitarray.o assp/filters.o assp/math.o assp/rfc.o assp/chain.o assp/fmt.o assp/memswab.o assp/rms.o dataobj.o performAssp.o types.o wrassp_init.o -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpkNDqqG/R.INSTALL2914d14d27ae1/wrassp/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-wrassp/00new/wrassp/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (wrassp) begin installing package ‘emuR’ * installing *source* package ‘Sim.DiffProc’ ... ** this is package ‘Sim.DiffProc’ version ‘5.0’ ** package ‘Sim.DiffProc’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Sim.DiffProc) * installing *source* package ‘soundgen’ ... ** this is package ‘soundgen’ version ‘2.8.0’ ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (soundgen) * installing *source* package ‘emuR’ ... ** this is package ‘emuR’ version ‘2.5.2’ ** package ‘emuR’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (emuR) * installing *source* package ‘bioacoustics’ ... ** this is package ‘bioacoustics’ version ‘0.2.10’ ** package ‘bioacoustics’ successfully unpacked and MD5 sums checked ** using staged installation checking for gcc... gcc-15 checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc-15 accepts -g... yes checking for gcc-15 option to enable C11 features... none needed checking whether the compiler supports GNU C++... yes checking whether g++-15 -std=gnu++17 accepts -g... yes checking for g++-15 -std=gnu++17 option to enable C++11 features... none needed configure: CC: gcc-15 configure: CXX: g++-15 -std=gnu++17 checking for cmake... /usr/bin/cmake configure: Found cmake: /usr/bin/cmake checking for OpenMP support... yes checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for fftw3.h... yes checking for library containing fftw_plan_r2r_1d... -lfftw3 configure: Suitable fftw3 library found. configure: creating ./config.status config.status: creating src/Makevars ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-9) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpWVvIvE/R.INSTALL29157742bf0fb/bioacoustics/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O2 -Wall -pedantic -mtune=native -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O2 -Wall -pedantic -mtune=native -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c bat_bioacoustics.cpp -o bat_bioacoustics.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O2 -Wall -pedantic -mtune=native -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c bat_classify.cpp -o bat_classify.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O2 -Wall -pedantic -mtune=native -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c bb_analyse.cpp -o bb_analyse.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O2 -Wall -pedantic -mtune=native -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c bb_detect.cpp -o bb_detect.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O2 -Wall -pedantic -mtune=native -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c bb_extract.cpp -o bb_extract.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O2 -Wall -pedantic -mtune=native -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c bc_blob_finder.cpp -o bc_blob_finder.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O2 -Wall -pedantic -mtune=native -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c bc_features.cpp -o bc_features.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O2 -Wall -pedantic -mtune=native -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c bc_img_processing.cpp -o bc_img_processing.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O2 -Wall -pedantic -mtune=native -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c fft.cpp -o fft.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O2 -Wall -pedantic -mtune=native -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c read_wac.cpp -o read_wac.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O2 -Wall -pedantic -mtune=native -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c spectro.cpp -o spectro.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o bioacoustics.so RcppExports.o bat_bioacoustics.o bat_classify.o bb_analyse.o bb_detect.o bb_extract.o bc_blob_finder.o bc_features.o bc_img_processing.o fft.o read_wac.o spectro.o -lfftw3 -fopenmp -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpWVvIvE/R.INSTALL29157742bf0fb/bioacoustics/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-bioacoustics/00new/bioacoustics/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bioacoustics) checking soundgen_2.8.0.tar.gz ... checking praatpicture_1.7.0.tar.gz ... checking voiceR_0.1.0.tar.gz ... checking warbleR_1.1.37.tar.gz ... Depends: Package: soundgen Depends: R (>= 4.1) Imports: stats (>= 4.0.0), graphics, utils, tuneR, seewave (>= 2.1.6), zoo, mvtnorm, dtw, phonTools, signal, shiny, shinyjs, bslib, foreach, doParallel, nonlinearTseries, data.table Timings: user system elapsed soundgen 146.857 5.801 155.795 Results: Check status summary: OK Source packages 1 Reverse depends 3 Check results summary: soundgen ... OK rdepends_praatpicture ... OK rdepends_voiceR ... OK rdepends_warbleR ... OK