# fpath = system.file("testdata", package = "smerc") # fname = paste(fpath, "/uls_test_ref.rda", sep = "") # load(fname) # # # test updated methods # data(nydf) # data(nyw) # coords = with(nydf, cbind(longitude, latitude)) # set.seed(1) # uls_test_check = uls.test(coords = coords, cases = floor(nydf$cases), # pop = nydf$pop, w = nyw, # alpha = 0.05, longlat = TRUE, # nsim = 19, ubpop = 0.5) # # context("check uls.test with reference") # test_that("uls.test and uls_test_ref match", { # for (i in seq_along(uls_test_ref$clusters)) { # expect_equal(uls_test_ref$clusters[[i]]$locids, uls_test_check$clusters[[i]]$locids) # expect_equal(uls_test_ref$clusters[[i]]$coords, uls_test_check$clusters[[i]]$centroid) # expect_equal(uls_test_ref$clusters[[i]]$r, uls_test_check$clusters[[i]]$r) # expect_equal(uls_test_ref$clusters[[i]]$max_dist, uls_test_check$clusters[[i]]$max_dist) # expect_equal(uls_test_ref$clusters[[i]]$pop, uls_test_check$clusters[[i]]$pop) # expect_equal(uls_test_ref$clusters[[i]]$cases, uls_test_check$clusters[[i]]$cases) # expect_equal(uls_test_ref$clusters[[i]]$ex, uls_test_check$clusters[[i]]$expected) # expect_equal(uls_test_ref$clusters[[i]]$smr, uls_test_check$clusters[[i]]$smr) # expect_equal(uls_test_ref$clusters[[i]]$rr, uls_test_check$clusters[[i]]$rr) # expect_equal(uls_test_ref$clusters[[i]]$loglikrat, uls_test_check$clusters[[i]]$loglikrat) # expect_equal(uls_test_ref$clusters[[i]]$test_statistic, uls_test_check$clusters[[i]]$test_statistic) # expect_equal(uls_test_ref$clusters[[i]]$pvalue, uls_test_check$clusters[[i]]$pvalue) # expect_equal(uls_test_ref$clusters[[i]]$w, uls_test_check$clusters[[i]]$w) # } # })