context("test optimal_ubpop for correctness") # test optimal_ubpop function data(nydf, package = "smerc") cases <- nydf$cases pop <- nydf$population coords <- nydf[, c("x", "y")] estats <- suppressWarnings(optimal_ubpop( coords = coords, cases = cases, pop = pop, alpha = 1, nsim = 9, ubpop_seq = seq(0.05, 0.5, by = 0.05), min.cases = 0 )) # correct values of neg_lrt and gini_coef # (created manually at some point) neg_lrt <- c( -73.84, -70.72, -70.72, -70.72, -70.72, -70.72, -70.72, -70.72, -70.72, -70.72 ) gini_coef <- c( -0.23, -0.23, -0.23, -0.23, -0.23, -0.23, -0.23, -0.23, -0.23, -0.23 ) test_that("check accuracy for optimal_ubpop for NY data", { expect_equal(neg_lrt, round(estats$elbow_method$stats, 2)) expect_equal(gini_coef, round(estats$gini_method$stats, 2)) # check for correct upper bound expect_equal(0.1, estats$elbow_ubpop) expect_equal(0.1, estats$gini_ubpop) })