downloading reverse dependencies ... downloading MDCcure_0.1.0.tar.gz ... ok downloading NPHMC_2.4.2.tar.gz ... ok downloading INLAjoint_24.3.25.tar.gz ... ok installing dependencies ‘frailtypack’, ‘INLA’, ‘JMbayes2’, ‘npcure’, ‘pinp’, ‘smcure’ Warning: package ‘INLA’ is not available for this version of R A version of this package for your version of R might be available elsewhere, see the ideas at https://cran.r-project.org/doc/manuals/r-devel/R-admin.html#Installing-packages also installing the dependency ‘survC1’ begin installing package ‘survC1’ begin installing package ‘smcure’ begin installing package ‘npcure’ begin installing package ‘pinp’ begin installing package ‘JMbayes2’ * installing *source* package ‘pinp’ ... ** this is package ‘pinp’ version ‘0.0.11’ ** package ‘pinp’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pinp) * installing *source* package ‘npcure’ ... ** this is package ‘npcure’ version ‘0.1-5’ ** package ‘npcure’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-4) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp1qwdM4/R.INSTALL1fdb93698894ec/npcure/src' gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c beran.c -o beran.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c boot.c -o boot.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c cv.c -o cv.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c latency.c -o latency.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c npcure_init.c -o npcure_init.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c probcure.c -o probcure.o gcc-15 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o npcure.so beran.o boot.o cv.o latency.o npcure_init.o probcure.o -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp1qwdM4/R.INSTALL1fdb93698894ec/npcure/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-npcure/00new/npcure/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (npcure) * installing *source* package ‘smcure’ ... ** this is package ‘smcure’ version ‘2.2’ ** using staged installation ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (smcure) * installing *source* package ‘survC1’ ... ** this is package ‘survC1’ version ‘1.0-3’ ** package ‘survC1’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-4) 15.2.0’ using Fortran compiler: ‘GNU Fortran (Debian 15.2.0-4) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpF1Coqv/R.INSTALL1fdb977f0121ce/survC1/src' gfortran-15 -fpic -g -O2 -Wall -pedantic -mtune=native -c husurvC1v1.f -o husurvC1v1.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c survC1_init.c -o survC1_init.o gcc-15 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o survC1.so husurvC1v1.o survC1_init.o -lgfortran -lm -lquadmath -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpF1Coqv/R.INSTALL1fdb977f0121ce/survC1/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-survC1/00new/survC1/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (survC1) begin installing package ‘frailtypack’ * installing *source* package ‘JMbayes2’ ... ** this is package ‘JMbayes2’ version ‘0.5-7’ ** package ‘JMbayes2’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-4) 15.2.0’ using C++ compiler: ‘g++-15 (Debian 15.2.0-4) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpNV5ivO/R.INSTALL1fdb9b340d01fb/JMbayes2/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c mcmc_fit.cpp -o mcmc_fit.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o JMbayes2.so RcppExports.o init.o mcmc_fit.o -fopenmp -llapack -L/home/hornik/tmp/R-d-gcc-15/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpNV5ivO/R.INSTALL1fdb9b340d01fb/JMbayes2/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-JMbayes2/00new/JMbayes2/libs ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (JMbayes2) * installing *source* package ‘frailtypack’ ... ** this is package ‘frailtypack’ version ‘3.7.0’ ** package ‘frailtypack’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-4) 15.2.0’ using Fortran compiler: ‘GNU Fortran (Debian 15.2.0-4) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp4vLF9P/R.INSTALL1fdcbe533cf38c/frailtypack/src' gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c Adonnees.f90 -o Adonnees.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c AparamMultive.f90 -o AparamMultive.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c Aparameters.f90 -o Aparameters.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c autres_fonctions.f90 -o autres_fonctions.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c aaOptim_New_scl2.f90 -o aaOptim_New_scl2.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c aaOptim_New_scl.f90 -o aaOptim_New_scl.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c Integrant_scl.f90 -o Integrant_scl.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpa_laplace.f90 -o funcpa_laplace.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpa_adaptative.f90 -o funcpa_adaptative.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c Integrale_mult_scl.f90 -o Integrale_mult_scl.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c Pour_Adaptative.f90 -o Pour_Adaptative.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c aGhermite.f90 -o aGhermite.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c aaOptim.f90 -o aaOptim.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c aaOptim_SCL_0.f90 -o aaOptim_SCL_0.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c aaOptimres.f90 -o aaOptimres.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c aaUseFunction.f90 -o aaUseFunction.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c aaUseFunctionG.f90 -o aaUseFunctionG.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c aamarq98o.f90 -o aamarq98o.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c additive.f90 -o additive.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c afuncpasres.f90 -o afuncpasres.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c ahrmsym.f90 -o ahrmsym.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c aresidusMartingale.f90 -o aresidusMartingale.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c distance.f90 -o distance.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c epoce.f90 -o epoce.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c epoce_log.f90 -o epoce_log.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c epoce_long.f90 -o epoce_long.o epoce_long.f90:2068:73: 2068 | *dexp(etaydc(1)*xea22(1)+etaydc(2)*xea22(2))) | ^ Warning: ‘sudc’ may be used uninitialized [-Wmaybe-uninitialized] epoce_long.f90:1942:31: 1942 | double precision::sudc | ^~~~ note: ‘sudc’ declared here gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c epoce_long_nl.f90 -o epoce_long_nl.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c fortran_random.c -o fortran_random.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c frailtypack.f90 -o frailtypack.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c frailtypackgen.f90 -o frailtypackgen.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpaG_tps.f90 -o funcpaG_tps.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpaGcpm.f90 -o funcpaGcpm.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpaGcpm_intcens.f90 -o funcpaGcpm_intcens.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpaGcpm_log.f90 -o funcpaGcpm_log.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpaGsplines.f90 -o funcpaGsplines.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpaGsplines_intcens.f90 -o funcpaGsplines_intcens.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpaGsplines_log.f90 -o funcpaGsplines_log.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpaGweib.f90 -o funcpaGweib.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpaGweib_intcens.f90 -o funcpaGweib_intcens.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpaGweib_log.f90 -o funcpaGweib_log.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpaMultivCpm.f90 -o funcpaMultivCpm.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpaMultivSplines.f90 -o funcpaMultivSplines.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpaMultivWeib.f90 -o funcpaMultivWeib.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpaacpm.f90 -o funcpaacpm.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpaasplines.f90 -o funcpaasplines.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpaaweib.f90 -o funcpaaweib.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpaj_tps.f90 -o funcpaj_tps.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpajcompetingsplines.f90 -o funcpajcompetingsplines.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpajcompetingweib.f90 -o funcpajcompetingweib.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpajcpm.f90 -o funcpajcpm.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpajcpm_log.f90 -o funcpajcpm_log.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpajgen_tps.f90 -o funcpajgen_tps.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpajgeneral.f90 -o funcpajgeneral.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpajgenparam.f90 -o funcpajgenparam.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpajlongisplines.f90 -o funcpajlongisplines.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpajlongisplines2.f90 -o funcpajlongisplines2.o funcpajlongisplines2.f90:398:54: 398 | Chol(1,1)=bh(np-nva-nb_re-nparammed+1) | ^ Warning: ‘nb_re’ may be used uninitialized [-Wmaybe-uninitialized] funcpajlongisplines2.f90:9:6: 9 | use comon | ^ note: ‘nb_re’ was declared here gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpajlongisplines_nl.f90 -o funcpajlongisplines_nl.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpajlongiweib.f90 -o funcpajlongiweib.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpajlongiweib_nl.f90 -o funcpajlongiweib_nl.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpajsplines.f90 -o funcpajsplines.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpajsplinesIndiv.f90 -o funcpajsplinesIndiv.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpajsplines_copule_surrogate_scl_2.f90 -o funcpajsplines_copule_surrogate_scl_2.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpajsplines_fam.f90 -o funcpajsplines_fam.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpajsplines_intcens.f90 -o funcpajsplines_intcens.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpajsplines_log.f90 -o funcpajsplines_log.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpajsplines_logIndiv.f90 -o funcpajsplines_logIndiv.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpajsplines_surrogate_scl_1.f90 -o funcpajsplines_surrogate_scl_1.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpajsplines_surrogate_scl_2.f90 -o funcpajsplines_surrogate_scl_2.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpajweib.f90 -o funcpajweib.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpajweib_fam.f90 -o funcpajweib_fam.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpajweib_intcens.f90 -o funcpajweib_intcens.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpajweib_log.f90 -o funcpajweib_log.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpalongi_uni.f90 -o funcpalongi_uni.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpancpm.f90 -o funcpancpm.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpansplines.f90 -o funcpansplines.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpanweib.f90 -o funcpanweib.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpas_tps.f90 -o funcpas_tps.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpascpm.f90 -o funcpascpm.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpascpm_intcens.f90 -o funcpascpm_intcens.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpascpm_log.f90 -o funcpascpm_log.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpasgenadditif_alternatif.f90 -o funcpasgenadditif_alternatif.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpasgenadditif_pen.f90 -o funcpasgenadditif_pen.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpasgenadditif_tps.f90 -o funcpasgenadditif_tps.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpasgenadditifalternatif_tps.f90 -o funcpasgenadditifalternatif_tps.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpasgenloglogistic.f90 -o funcpasgenloglogistic.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpasgenlognormal.f90 -o funcpasgenlognormal.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpasgenweib.f90 -o funcpasgenweib.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpassplines.f90 -o funcpassplines.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpassplines_intcens.f90 -o funcpassplines_intcens.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpassplines_log.f90 -o funcpassplines_log.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpasweib.f90 -o funcpasweib.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpasweib_intcens.f90 -o funcpasweib_intcens.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c funcpasweib_log.f90 -o funcpasweib_log.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c joint.f90 -o joint.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c natural_effects.f90 -o natural_effects.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c jointSurrogate.f90 -o jointSurrogate.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c joint_competing.f90 -o joint_competing.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c joint_longi.f90 -o joint_longi.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c joint_longi_nl.f90 -o joint_longi_nl.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c joint_surrogate.f90 -o joint_surrogate.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c jointgen.f90 -o jointgen.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c jointsurrokendall.f90 -o jointsurrokendall.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c longi_uni_nl.f90 -o longi_uni_nl.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c multiveJoint.f90 -o multiveJoint.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c nested.f90 -o nested.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c prediction.f90 -o prediction.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c prediction_Recurr_Sha.f90 -o prediction_Recurr_Sha.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c prediction_biv.f90 -o prediction_biv.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c prediction_sha_logn.f90 -o prediction_sha_logn.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c prediction_tri.f90 -o prediction_tri.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c prediction_tri_nl.f90 -o prediction_tri_nl.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c predictionfam.f90 -o predictionfam.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c risque.f90 -o risque.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c somme.f90 -o somme.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c surrosim.f90 -o surrosim.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c survival.f90 -o survival.o gfortran-15 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c test.f90 -o test.o gcc-15 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o frailtypack.so Adonnees.o AparamMultive.o Aparameters.o Integrale_mult_scl.o Integrant_scl.o Pour_Adaptative.o aGhermite.o aaOptim.o aaOptim_New_scl.o aaOptim_New_scl2.o aaOptim_SCL_0.o aaOptimres.o aaUseFunction.o aaUseFunctionG.o aamarq98o.o additive.o afuncpasres.o ahrmsym.o aresidusMartingale.o autres_fonctions.o distance.o epoce.o epoce_log.o epoce_long.o epoce_long_nl.o fortran_random.o frailtypack.o frailtypackgen.o funcpaG_tps.o funcpaGcpm.o funcpaGcpm_intcens.o funcpaGcpm_log.o funcpaGsplines.o funcpaGsplines_intcens.o funcpaGsplines_log.o funcpaGweib.o funcpaGweib_intcens.o funcpaGweib_log.o funcpaMultivCpm.o funcpaMultivSplines.o funcpaMultivWeib.o funcpa_adaptative.o funcpa_laplace.o funcpaacpm.o funcpaasplines.o funcpaaweib.o funcpaj_tps.o funcpajcompetingsplines.o funcpajcompetingweib.o funcpajcpm.o funcpajcpm_log.o funcpajgen_tps.o funcpajgeneral.o funcpajgenparam.o funcpajlongisplines.o funcpajlongisplines2.o funcpajlongisplines_nl.o funcpajlongiweib.o funcpajlongiweib_nl.o funcpajsplines.o funcpajsplinesIndiv.o funcpajsplines_copule_surrogate_scl_2.o funcpajsplines_fam.o funcpajsplines_intcens.o funcpajsplines_log.o funcpajsplines_logIndiv.o funcpajsplines_surrogate_scl_1.o funcpajsplines_surrogate_scl_2.o funcpajweib.o funcpajweib_fam.o funcpajweib_intcens.o funcpajweib_log.o funcpalongi_uni.o funcpancpm.o funcpansplines.o funcpanweib.o funcpas_tps.o funcpascpm.o funcpascpm_intcens.o funcpascpm_log.o funcpasgenadditif_alternatif.o funcpasgenadditif_pen.o funcpasgenadditif_tps.o funcpasgenadditifalternatif_tps.o funcpasgenloglogistic.o funcpasgenlognormal.o funcpasgenweib.o funcpassplines.o funcpassplines_intcens.o funcpassplines_log.o funcpasweib.o funcpasweib_intcens.o funcpasweib_log.o init.o joint.o jointSurrogate.o joint_competing.o joint_longi.o joint_longi_nl.o joint_surrogate.o jointgen.o jointsurrokendall.o longi_uni_nl.o multiveJoint.o natural_effects.o nested.o prediction.o prediction_Recurr_Sha.o prediction_biv.o prediction_sha_logn.o prediction_tri.o prediction_tri_nl.o predictionfam.o risque.o somme.o surrosim.o survival.o test.o -fopenmp -lgfortran -lm -lquadmath -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp4vLF9P/R.INSTALL1fdcbe533cf38c/frailtypack/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-frailtypack/00new/frailtypack/libs ** R ** data ** demo ** inst ** byte-compile and prepare package for lazy loading Note: ... may be used in an incorrect context Note: ... may be used in an incorrect context Note: ... may be used in an incorrect context Note: ... may be used in an incorrect context Note: ... may be used in an incorrect context Note: ... may be used in an incorrect context Note: ... may be used in an incorrect context Note: ... may be used in an incorrect context Note: ... may be used in an incorrect context Note: ... may be used in an incorrect context Note: ... may be used in an incorrect context Note: ... may be used in an incorrect context Note: ... may be used in an incorrect context Note: ... may be used in an incorrect context Note: ... may be used in an incorrect context Note: ... may be used in an incorrect context Note: ... may be used in an incorrect context Note: ... may be used in an incorrect context Note: ... may be used in an incorrect context Note: ... may be used in an incorrect context Note: ... may be used in an incorrect context Note: ... may be used in an incorrect context Note: ... may be used in an incorrect context Note: ... may be used in an incorrect context Note: ... may be used in an incorrect context Note: ... may be used in an incorrect context Note: ... may be used in an incorrect context Note: ... may be used in an incorrect context Note: ... may be used in an incorrect context Note: ... may be used in an incorrect context Note: ... may be used in an incorrect context Note: ... may be used in an incorrect context Note: ... may be used in an incorrect context ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (frailtypack) checking smcure_2.2.tar.gz ... checking MDCcure_0.1.0.tar.gz ... checking NPHMC_2.4.2.tar.gz ... checking INLAjoint_24.3.25.tar.gz ... Depends: Package: smcure Depends: survival, stats, graphics Timings: user system elapsed smcure 33.467 4.131 37.679 Results: Check status summary: NOTE OK Source packages 1 0 Reverse depends 0 3 Check results summary: smcure ... NOTE * checking CRAN incoming feasibility ... [4s/4s] NOTE rdepends_INLAjoint ... OK rdepends_MDCcure ... OK rdepends_NPHMC ... OK