context("anlvm.fit works for cars lm and boston lm across several argument permutations") set.seed(234) carslm <- lm(dist ~ speed, data = cars) theargs1 <- list("g" = c("sq", "exp"), "varselect" = c("none", "hettest", "cv.linear", "cv.cluster", "qgcv.linear", "qgcv.cluster")) theargs2 <- list("g" = "sq", "cluster" = TRUE, "nclust" = c("elbow.swd", "elbow.mwd", "elbow.both"), "varselect" = c("none", "hettest", "cv.linear", "cv.cluster", "qgcv.linear", "qgcv.cluster")) allargs1 <- expand.grid(theargs1, stringsAsFactors = FALSE) allargs2 <- expand.grid(theargs2, stringsAsFactors = FALSE) test_that("simple linear regression (carslm) works with all combinations of formals", { carsalvm1 <- lapply(1:nrow(allargs1), function(i) { # print(i) do.call(what = anlvm.fit, args = append(list("mainlm" = carslm), allargs1[i, ])) }) lapply(1:length(carsalvm1), function(i) expect_true(all(carsalvm1[[i]]$var.est > 0))) carsalvm2 <- lapply(1:nrow(allargs2), function(i) { # print(i) do.call(what = anlvm.fit, args = append(list("mainlm" = carslm), allargs2[i, ])) }) lapply(1:length(carsalvm2), function(i) expect_true(all(carsalvm2[[i]]$var.est > 0))) }) bostonlm <- lm(cmedv ~ crim + zn + indus + chas + nox + rm + age + dis + rad + tax + ptratio + b + lstat, data = BostonHousing2) theargs1 <- list("g" = c("sq", "exp"), "varselect" = c("none", "hettest", "qgcv.linear"), "hettest" = "breusch_pagan") theargs2 <- list("g" = "sq", "cluster" = TRUE, "nclust" = c("elbow.swd", "elbow.mwd", "elbow.both"), "varselect" = c("none", "hettest", "qgcv.linear"), "hettest" = "breusch_pagan") allargs1 <- expand.grid(theargs1, stringsAsFactors = FALSE) allargs2 <- expand.grid(theargs2, stringsAsFactors = FALSE) test_that("simple linear regression (bostonlm) works with all combinations of formals", { skip_on_cran() bostonalvm1 <- lapply(1:nrow(allargs1), function(i) { # print(i) do.call(what = anlvm.fit, args = append(list("mainlm" = bostonlm), allargs1[i, ])) }) lapply(1:length(bostonalvm1), function(i) expect_true(all(bostonalvm1[[i]]$var.est > 0))) bostonalvm2 <- lapply(1:nrow(allargs2), function(i) { # print(i) do.call(what = anlvm.fit, args = append(list("mainlm" = bostonlm), allargs2[i, ])) }) lapply(1:length(bostonalvm2), function(i) expect_true(all(bostonalvm2[[i]]$var.est > 0))) })