.runThisTest <- Sys.getenv("RunAllsjPlotTests") == "yes" if (suppressWarnings( require("testthat") && require("sjPlot") && require("sjlabelled") && require("haven") && require("sjmisc") && require("lme4") && require("glmmTMB") && interactive() )) { data(sleepstudy) data(Salamanders) data(iris) data(efc) efc <- to_factor(efc, e42dep, c172code, c161sex) m1 <- lmer(Reaction ~ Days + (1 + Days | Subject), data = sleepstudy, REML = F) m2 <- lmer(Sepal.Length ~ Sepal.Width + Petal.Length + (1 | Species), data = iris) m3 <- lm(neg_c_7 ~ e42dep + barthtot + c161sex, data = efc) m4 <- glmmTMB( count ~ spp + mined + (1 | site), ziformula = ~ spp + mined, family = truncated_nbinom2, Salamanders ) test_that("tab_model", { p <- tab_model(m1, m2, m3) }) test_that("tab_model", { tab_model(m1, m2, m3, m4) }) test_that("tab_model, check shows", { p <- tab_model(m1, m2, m3, show.intercept = FALSE, show.fstat = TRUE, show.se = TRUE) p <- tab_model(m1, m2, m3, show.intercept = FALSE, show.fstat = TRUE, show.se = TRUE, show.ci = F, show.df = TRUE, p.val = "kr") }) test_that("tab_model, check terms", { p <- tab_model(m1, m2, m3, show.intercept = FALSE, show.fstat = TRUE, show.se = TRUE, terms = c("Days", "Sepal.Width", "c161sex2", "barthtot")) p <- tab_model(m1, m2, m3, show.intercept = FALSE, show.fstat = TRUE, show.se = TRUE, show.ci = F, show.df = TRUE, p.val = "kr", rm.terms = c("Days", "Sepal.Width", "c161sex2", "barthtot")) p <- tab_model(m1, m2, m3, show.intercept = FALSE, show.fstat = TRUE, show.se = TRUE, show.ci = F, show.df = TRUE, rm.terms = c("Sepal.Width", "c161sex2", "barthtot")) }) test_that("tab_model, std", { p <- tab_model(m1, show.std = "std") p <- tab_model(m1, show.std = "std2") p <- tab_model(m2, show.std = "std") p <- tab_model(m2, show.std = "std2") p <- tab_model(m1, m2, show.std = "std") p <- tab_model(m1, m2, m3, show.std = "std") p <- tab_model(m1, m2, m3, show.std = "std2") }) if (.runThisTest) { if (suppressWarnings( require("testthat") && require("rstanarm") && require("sjPlot") && require("lme4") )) { # fit linear model data(sleepstudy) sleepstudy$age <- round(runif(nrow(sleepstudy), min = 20, max = 60)) sleepstudy$Rdicho <- dicho(sleepstudy$Reaction) m1 <- stan_glmer( Reaction ~ Days + age + (1 | Subject), data = sleepstudy, QR = TRUE, # this next line is only to keep the example small in size! chains = 2, cores = 1, seed = 12345, iter = 500 ) m2 <- stan_glmer( Rdicho ~ Days + age + (1 | Subject), data = sleepstudy, QR = TRUE, family = binomial, chains = 2, iter = 500 ) test_that("tab_model, rstan", { p <- tab_model(m1) p <- tab_model(m2) p <- tab_model(m1, m2) p <- tab_model(m1, m2, show.ci50 = FALSE) p <- tab_model(m1, m2, col.order = c("ci.outer", "ci.inner", "est")) p <- tab_model(m1, m2, bpe = "mean") }) } } }