downloading reverse dependencies ... downloading bsitar_0.3.2.tar.gz ... ok downloading nlive_0.7.0.tar.gz ... ok installing dependencies ‘cheapr’, ‘fastplyr’, ‘installr’, ‘lcmm’, ‘nlraa’, ‘Rmisc’, ‘saemix’, ‘sitar’ also installing the dependency ‘npde’ begin installing package ‘npde’ begin installing package ‘sitar’ begin installing package ‘cheapr’ begin installing package ‘installr’ begin installing package ‘nlraa’ begin installing package ‘Rmisc’ begin installing package ‘lcmm’ * installing *source* package ‘Rmisc’ ... ** this is package ‘Rmisc’ version ‘1.5.1’ ** package ‘Rmisc’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Rmisc) * installing *source* package ‘installr’ ... ** this is package ‘installr’ version ‘0.23.4’ ** package ‘installr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (installr) * installing *source* package ‘sitar’ ... ** this is package ‘sitar’ version ‘1.5.0’ ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (sitar) * installing *source* package ‘npde’ ... ** this is package ‘npde’ version ‘3.5’ ** package ‘npde’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (npde) begin installing package ‘saemix’ * installing *source* package ‘nlraa’ ... ** this is package ‘nlraa’ version ‘1.9.7’ ** package ‘nlraa’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (nlraa) * installing *source* package ‘saemix’ ... ** this is package ‘saemix’ version ‘3.3’ ** package ‘saemix’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (saemix) * installing *source* package ‘cheapr’ ... ** this is package ‘cheapr’ version ‘1.3.2’ ** package ‘cheapr’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpiRXHSg/R.INSTALL1791d416d6362d/cheapr/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c altrep.cpp -o altrep.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c api.cpp -o api.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c attrs.cpp -o attrs.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c combine.cpp -o combine.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c cpp11.cpp -o cpp11.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c gcd.cpp -o gcd.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c int64.cpp -o int64.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c lag.cpp -o lag.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c lists.cpp -o lists.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c nas.cpp -o nas.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c scalars.cpp -o scalars.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c sequences.cpp -o sequences.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c set_math.cpp -o set_math.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c sset.cpp -o sset.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c utils.cpp -o utils.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c which.cpp -o which.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o cheapr.so altrep.o api.o attrs.o combine.o cpp11.o gcd.o int64.o lag.o lists.o nas.o scalars.o sequences.o set_math.o sset.o utils.o which.o -fopenmp -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpiRXHSg/R.INSTALL1791d416d6362d/cheapr/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-cheapr/00new/cheapr/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cheapr) begin installing package ‘fastplyr’ * installing *source* package ‘fastplyr’ ... ** this is package ‘fastplyr’ version ‘0.9.0’ ** package ‘fastplyr’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmprxLnfe/R.INSTALL1793db3403a4bb/fastplyr/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cheapr/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c cpp11.cpp -o cpp11.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cheapr/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c fastplyr.cpp -o fastplyr.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cheapr/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c imports.cpp -o imports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cheapr/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c tidy.cpp -o tidy.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o fastplyr.so cpp11.o fastplyr.o imports.o tidy.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmprxLnfe/R.INSTALL1793db3403a4bb/fastplyr/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-fastplyr/00new/fastplyr/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (fastplyr) * installing *source* package ‘lcmm’ ... ** this is package ‘lcmm’ version ‘2.2.1’ ** package ‘lcmm’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-19) 14.2.0’ using Fortran compiler: ‘GNU Fortran (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmprN5ZEZ/R.INSTALL1791ce5af127c7/lcmm/src' gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c runiran.c -o runiran.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c compute.f90 -o compute.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c hetmixOrd.f90 -o hetmixOrd.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c hetmixlin.f90 -o hetmixlin.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c hetmixCont.f90 -o hetmixCont.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c Jointhet.f90 -o Jointhet.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c calculusTransfo.f90 -o calculusTransfo.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c predictCont.f90 -o predictCont.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c predictMult.f90 -o predictMult.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c postprob2.f90 -o postprob2.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c cvpl.f90 -o cvpl.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c predictYcond.f90 -o predictYcond.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c mpjhet.f90 -o mpjhet.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c hetmixMult.f90 -o hetmixMult.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c iteminfo.f90 -o iteminfo.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c Integ.f90 -o Integ.o Integ.f90:23:28: 23 | integer :: ier, nmoins, kk, nvarprob, ncg, ncssg, nea, nef, nvc, nprob | 1 Warning: Unused variable ‘kk’ declared at (1) [-Wunused-variable] gcc-14 -std=gnu23 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o lcmm.so init.o runiran.o compute.o hetmixOrd.o hetmixlin.o hetmixCont.o Jointhet.o calculusTransfo.o predictCont.o predictMult.o postprob2.o cvpl.o predictYcond.o mpjhet.o hetmixMult.o iteminfo.o Integ.o -L/home/hornik/tmp/R/lib -lRblas -lgfortran -lm -lquadmath -lgfortran -lm -lquadmath -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmprN5ZEZ/R.INSTALL1791ce5af127c7/lcmm/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-lcmm/00new/lcmm/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (lcmm) checking sitar_1.5.0.tar.gz ... checking nlive_0.7.0.tar.gz ... checking bsitar_0.3.2.tar.gz ... Depends: Package: sitar Depends: nlme, R (>= 4.1.0) Imports: dplyr, forcats, ggplot2, glue, graphics, magrittr, methods, purrr, rlang, rsample, splines, splines2, stats, tibble, tidyr Timings: user system elapsed sitar 75.214 5.453 84.982 Results: Check status summary: ERROR OK Source packages 0 1 Reverse depends 1 1 Check results summary: sitar ... OK rdepends_bsitar ... ERROR * checking re-building of vignette outputs ... [57s/57s] ERROR rdepends_nlive ... OK Check results changes: Package: bsitar Check: re-building of vignette outputs New result: ERROR