library(hedgehog) freeze_eval <- names(.GlobalEnv) # defCondition ---- # defData ---- test_that("defData throws errors", { skip_on_cran() expect_error(defData(dist = "nonrandom", formula = 7, id = "idnum"), class = "simstudy::missingArgument") expect_error(defData(varname = "xnr", dist = "nonrandom", id = "idnum"), class = "simstudy::missingArgument") }) # defRead ---- # .evalDef ---- # test_that("checks combine in .evalDef correctly", { # skip_on_cran() # # # this generates 20 previously defined varnames. # gen_defVars <- gen.and_then(gen.int(20), gen_varnames) # # gen_evalDef_call <- # gen.and_then(gen_defVars, function(defVars) { # generate(for (i in gen_dist) { # list( # newvar = defVars[1], # newform = get(reg[name == i]$formula)(defVars[-1]), # newdist = i, # variance = get(reg[name == i]$variance)(defVars[-1]), # link = get(reg[name == i]$link), # defVars = defVars[-1] # ) # }) # }) # # forall(gen_evalDef_call, function(args) expect_silent(do.call(.evalDef, args))) # }) test_that(".evalDef throws errors correctly.", { skip_on_cran() expect_error(.evalDef(newvar = 1, "1 + 2", "normal", 0, "identiy", ""), class = "simstudy::wrongType") expect_error(.evalDef(newvar = c("a", "b"), "1 + 2", "normal", 0, "identiy", ""), class = "simstudy::lengthMismatch") expect_error(.evalDef(newvar = "varname", "1 + 2", "not valid", 0, "identiy", ""), class = "simstudy::optionInvalid") expect_error(.evalDef("..varname", 3, "normal", 0, "identity", ""), class = "simstudy::valueError") expect_error(.evalDef("varname", 3, "normal", 0, "identity", "varname"), class = "simstudy::alreadyDefined") expect_error(.evalDef("varname", 3, "normal", 0, "identity"), class = "simstudy::missingArgument") expect_warning(.evalDef("2", 3, "normal", 0, "identity", ""), class = "simstudy::valueError") }) # .isValidArithmeticFormula ---- # test_that("g.a.e. formula checked correctly.", { # skip_on_cran() # # gen_gae <- # gen.and_then(gen_varnames(8), function(ns) { # gen.map(function(y) { # list( # defVars = ns, formula = y # ) # }, gen_formula(ns)) # }) # # forall(gen_gae, function(x) { # expect_silent(.isValidArithmeticFormula(x$formula, x$defVars)) # }) # }) test_that(".isValidArithmeticFormula throws errors correctly.", { skip_on_cran() expect_error(.isValidArithmeticFormula(""), class = "simstudy::noValue") expect_error(.isValidArithmeticFormula("a;3"), class = "simstudy::valueError") expect_error(.isValidArithmeticFormula("1+3-"), class = "simstudy::valueError") expect_error(.isValidArithmeticFormula("..log(3)", ""), class = "simstudy::valueError") expect_error(.isValidArithmeticFormula("a + 3", ""), class = "simstudy::notDefined") }) # .checkMixture ---- test_that("'mixture' formula checked correctly", { skip_on_cran() gen_mix_vars <- gen.choice(gen_dotdot_num, gen_varname, gen.element(-100:100)) gen_mix_vForm <- gen.sized(function(n) { gen.and_then(gen.c(gen_mix_vars, of = n), function(p) { gen_mixture(p) }) }) gen_mix_form <- gen.choice(gen_mix_vForm, gen_mix_scalar) forall(gen_mix_form, function(f) { expect_silent(.checkMixture(f)) }) }) test_that(".checkMixture throws errors.", { skip_on_cran() expect_error(.checkMixture("nr | .5 + a "), "same amount") expect_error(.checkMixture("nr | be"), "Probabilities can only be") }) # .checkCategorical ---- test_that("'categorical' formula checked correctly", { skip_on_cran() forall(gen_cat_probs, function(f) { expect_silent(.checkCategorical(genCatFormula(f))) }) }) test_that(".checkCategorical throws errors.", { skip_on_cran() expect_error(.checkCategorical("1"), "two numeric") }) # .checkUniform ---- # test_that("'uniform' formula checked correctly", { # skip_on_cran() # # forall( # gen.and_then(gen_varnames(10), function(names) { # generate(for (x in list( # min = gen_formula(names), # max = gen_formula(names) # )) { # paste0(x$min, ";", x$max) # }) # }), # function(r) { # expect_silent(.checkUniform(r)) # } # ) # }) test_that(".checkUniform throws errors.", { skip_on_cran() expect_error(.checkUniform(""), "format") expect_error(.checkUniform("1;2;3"), "format") }) # .isLink ---- # .isIdLog ---- # .isIdLogit ---- test_that("'link' checked as expected", { skip_on_cran() expect_silent(.isIdLog("identity")) expect_silent(.isIdLog("log")) expect_silent(.isIdLogit("identity")) expect_silent(.isIdLogit("logit")) expect_error(.isIdLog("what"), "Invalid link") expect_error(.isIdLogit("no"), "Invalid link") expect_error(.isIdLog(""), "Invalid link") expect_error(.isIdLogit(""), "Invalid link") }) # .rmDots ---- # .rmWS ---- # .isDotArr ---- # .splitFormula ---- test_that("utility functions work", { skip_on_cran() names <- c("..as", "..bs", "..cs[4]", "..ds[x]") res <- c("as", "bs", "cs[4]", "ds[x]") expect_equal(.isDotArr(names), c(FALSE, FALSE, TRUE, TRUE)) expect_equal(.rmDots(names), res) expect_equal(.rmWS(" ab c d \n\t e "), "abcde") expect_equal(.splitFormula("nosplit"), "nosplit") expect_vector(.splitFormula("a;split")) expect_equal(.splitFormula("a;split"), c("a", "split")) expect_equal(.splitFormula(";split"), c("", "split")) }) test_that("defRepeat works.", { skip_on_cran() expect_silent( defRepeat(nVars = 4, prefix = "g", formula = "1/3;1/3;1/3", variance = 0, dist = "categorical") ) def <- defData(varname = "a", formula = "1;1", dist = "trtAssign") expect_silent( defRepeat(def, 8, "b", formula = "5 + a", variance = 3, dist = "normal") ) }) test_that("defRepeat throws errors correctly.", { skip_on_cran() expect_error(defRepeat(prefix = "b", formula = 5, variance = 3, dist = "normal"), class = "simstudy::missingArgument" ) expect_error(defRepeat(nVars = 8, formula = 5, variance = 3, dist = "normal"), class = "simstudy::missingArgument" ) expect_error(defRepeat(nVars = 8, prefix = "b", variance = 3, dist = "normal"), class = "simstudy::missingArgument" ) expect_error(defRepeat(nVars = 4, prefix = "b", formula = "5 + a", variance = 3, dist = "normal")) }) rm(list = setdiff(names(.GlobalEnv), freeze_eval), pos = .GlobalEnv)