* using log directory ‘/srv/hornik/tmp/CRAN/silp.Rcheck’
* using R Under development (unstable) (2024-08-17 r87027)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    Debian clang version 18.1.8 (9)
    Debian flang-new version 18.1.8 (9)
* running under: Debian GNU/Linux trixie/sid
* using session charset: UTF-8
* checking for file ‘silp/DESCRIPTION’ ... OK
* this is package ‘silp’ version ‘1.0.0’
* package encoding: UTF-8
* checking CRAN incoming feasibility ... [3s/4s] NOTE
Maintainer: ‘Yi-Hsuan Tseng <r12227115@g.ntu.edu.tw>’

New submission

Possibly misspelled words in DESCRIPTION:
  Cheung (11:3)
  Hsiao (9:3)
  LMS (8:657)
  Moosbrugger (10:11)
  RAPI (8:63)
  al (9:12, 11:13)
  et (9:9, 11:10)

Found the following (possibly) invalid URLs:
  URL: https://github.com/TomBJJJ/silp
    From: DESCRIPTION
          README.md
    Status: 404
    Message: Not Found
  URL: https://github.com/TomBJJJ/silp/issues
    From: DESCRIPTION
    Status: 404
    Message: Not Found

The Description field contains
  Moosbrugger(2000)<https://doi.org/10.1007/BF02296338> Cheung et
  al.(2021)<https://doi.org/10.1007/s10869-020-09717-0>
Please write DOIs as <doi:prefix/suffix>.
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking serialization versions ... OK
* checking whether package ‘silp’ can be installed ... [2s/2s] OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [0s/0s] OK
* checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
* checking whether the package can be unloaded cleanly ... [0s/0s] OK
* checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
* checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
* checking loading without being on the library search path ... [0s/0s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [4s/4s] OK
* checking Rd files ... [0s/0s] OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... WARNING
Codoc mismatches from Rd file 'silp.Rd':
silp
  Code: function(model, data, center = "double", alp = FALSE, npd =
                 FALSE, ...)
  Docs: function(model, data, center = "double", tau.eq = FALSE, npd =
                 FALSE, ...)
  Argument names in code not in docs:
    alp
  Argument names in docs not in code:
    tau.eq
  Mismatches in argument names:
    Position: 4 Code: alp Docs: tau.eq

S4 class codoc mismatches from Rd file 'Silp-class.Rd':
Slots for class 'Silp'
  Code: alp boot composite_data fa npd origine pa rapi_model raw_data
        raw_model reliability time time_resilp
  Docs: boot composite_data fa npd origine pa rapi_model raw_data
        raw_model reliability time time_resilp

* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ... [2s/2s] OK
* checking PDF version of manual ... [3s/2s] OK
* checking HTML version of manual ... [0s/0s] OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE
Status: 1 WARNING, 2 NOTEs