context("test shrinkDTVP") test_bed <- function(args, dummies = FALSE, transf = FALSE) { set.seed(123) full_dat <- data.frame(y = runif(16), x1 = rnorm(16), x2 = runif(16), x3 = factor(rep(c(1, 2), 8))) test <- full_dat[11:16, ] args$data <- full_dat[1:10, ] args$formula <- y ~ x1 + x2 + 1 args$a_psi <- 3 args$c_psi <- 5 if (dummies == TRUE) { args$formula <- update.formula(args$formula, "~ . + x3") } if (transf == TRUE) { args$formula <- update.formula(args$formula, "~ . + I(x1^2) + I(log(x2))") } res <- do.call(shrinkDTVP, args) expect_s3_class(res, "shrinkTVP") # Test methods expect_invisible(plot(res, nplot = 7)) expect_visible(summary(res)) expect_invisible(plot(res$beta[[1]])) expect_visible(res) # Test prediction related functions/methods expect_type(LPDS(res, test[1,]), "double") expect_type(eval_pred_dens(-5:5, res, test[1,]), "double") expect_length(eval_pred_dens(-5:5, res, test[1,]), length(-5:5)) expect_s3_class(forecast_shrinkTVP(res, test), "shrinkTVP_forc") expect_s3_class(predict(res), "shrinkTVP_pred") expect_s3_class(fitted(res), "shrinkTVP_fitted") expect_s3_class(residuals(res), "shrinkTVP_resid") } mod_type = c("triple", "double", "ridge") transformations <- c(TRUE, FALSE) dummies <- c(TRUE, FALSE) #p <- c(0, 1, 2) scenarios <- expand.grid(mod_type, transformations, dummies)#, p) names(scenarios) <- c("mod_type", "transf", "dummies")#, "p") params <- c( "learn_a_xi", "learn_a_tau", "learn_c_xi", "learn_c_tau", "a_eq_c_xi", "a_eq_c_tau", "learn_kappa2_B", "learn_lambda2_B", "sv", "a_xi_adaptive", "c_xi_adaptive", "a_tau_adaptive", "c_tau_adaptive", "iid", "shrink_inter" ) for(i in length(scenarios)) { for (j in params) { args <- formals(shrinkDTVP) args <- args[sapply(args, function(x) x != "")] if (grepl("adaptive", j)) { args$MH_tuning$temp <- FALSE names(args$MH_tuning) <- j } else { args[[j]] <- !args[[j]] } #args$p <- scenarios$p[i] args$mod_type <- as.character(scenarios$mod_type[i]) args$display_progress <- FALSE args$niter <- 10 args$nburn <- 0 test_that(paste0("scenario: ", i, ", mod_type: ", scenarios$mod_type[i], ", transformations: ", scenarios$transf[i], ", dummies: ", scenarios$dummies[i], #", p: ", scenarios$p[i], ", toggled: ", j), { test_bed(args, scenarios$dummies[i], scenarios$transf[i]) }) } }