Package: biodosetools
Check: tests
New result: ERROR
    Running ‘testthat.R’ [19s/19s]
  Running the tests in ‘tests/testthat.R’ failed.
  Complete output:
    > library(testthat)
    > library(biodosetools)
    Loading required package: shiny
    Loading required package: golem
    > 
    > test_check("biodosetools")
    ! Problem with `glm()` -> constraint ML optimization will be used instead
    ! Problem with `glm()` -> constraint ML optimization will be used instead
    number of iterations= 43 
    Saving _problems/test-golem_utils_ui-99.R
    Saving _problems/test-golem_utils_ui-105.R
    ! Problem with `glm()` -> constraint ML optimization will be used instead
    ! Problem with `glm()` -> constraint ML optimization will be used instead
    number of iterations= 43 
    ! Problem with `glm()` -> constraint ML optimization will be used instead
    ! Problem with `glm()` -> constraint ML optimization will be used instead
    [ FAIL 2 | WARN 1 | SKIP 1 | PASS 455 ]
    
    ══ Skipped tests (1) ═══════════════════════════════════════════════════════════
    • On CRAN (1): 'test-golem-recommended.R:71:5'
    
    ══ Failed tests ════════════════════════════════════════════════════════════════
    ── Failure ('test-golem_utils_ui.R:96:3'): Test undisplay works ────────────────
    Expected `as.character(b)` to equal "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\">go</button>".
    Differences:
    lines(actual) vs lines(expected)
    - "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\">"
    - "  <span class=\"action-label\">go</span>"
    - "</button>"
    + "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\">go</button>"
    
    ── Failure ('test-golem_utils_ui.R:102:3'): Test undisplay works ───────────────
    Expected `as.character(b_undisplay)` to equal "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\" style=\"display: none;\">go</button>".
    Differences:
    lines(actual) vs lines(expected)
    - "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\" style=\"display: none;\">"
    - "  <span class=\"action-label\">go</span>"
    - "</button>"
    + "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\" style=\"display: none;\">go</button>"
    
    
    [ FAIL 2 | WARN 1 | SKIP 1 | PASS 455 ]
    Error:
    ! Test failures.
    Execution halted

Package: inshiny
Check: examples
New result: ERROR
  Running examples in ‘inshiny-Ex.R’ failed
  The error most likely occurred in:
  
  > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
  > ### Name: inline_button
  > ### Title: Inline action button
  > ### Aliases: inline_button
  > 
  > ### ** Examples
  > 
  > ui <- bslib::page_fixed(
  +     shiny::h1("A wonderful button"),
  +     inline("To update, please feel free to press the ",
  +         inline_button("mybutton",
  +             label = shiny::span(style = "font-style:italic", "button"),
  +             icon = shiny::icon("play"),
  +             meaning = "Update button", accent = "success"),
  +         "."
  +     )
  + )
  Error in check_tags(widget, shiny::tags$button(), "shiny::actionButton()") : 
    Unexpected tag structure from shiny::actionButton(). Please contact the package maintainer.
  Calls: <Anonymous> ... div -> dots_list -> inline -> inline_button -> check_tags
  Execution halted

Package: inshiny
Check: re-building of vignette outputs
New result: ERROR
  Error(s) in re-building vignettes:
    ...
  --- re-building ‘inshiny.Rmd’ using rmarkdown
  
  Quitting from inshiny.Rmd:64-86 [unnamed-chunk-3]
  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  <error/rlang_error>
  Error in `check_tags()`:
  ! Unexpected tag structure from shiny::actionButton(). Please contact the package maintainer.
  ---
  Backtrace:
       ▆
    1. ├─bslib::page_fixed(...)
    2. │ ├─bslib:::as_page(...)
    3. │ └─shiny::fixedPage(...)
    4. │   ├─shiny::bootstrapPage(...)
    5. │   │ └─rlang::list2(...)
    6. │   └─htmltools::div(class = "container", ...)
    7. │     └─rlang::dots_list(...)
    8. ├─inshiny::inline(...)
    9. └─inshiny::inline_button("colour", "Change colour")
   10.   └─inshiny:::check_tags(widget, shiny::tags$button(), "shiny::actionButton()")
  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  
  Error: processing vignette 'inshiny.Rmd' failed with diagnostics:
  Unexpected tag structure from shiny::actionButton(). Please contact the package maintainer.
  --- failed re-building ‘inshiny.Rmd’
  
  SUMMARY: processing the following file failed:
    ‘inshiny.Rmd’
  
  Error: Vignette re-building failed.
  Execution halted

Package: inshiny
Check: tests
New result: ERROR
    Running ‘testthat.R’ [3s/3s]
  Running the tests in ‘tests/testthat.R’ failed.
  Complete output:
    > # This file is part of the standard setup for testthat.
    > # It is recommended that you do not modify it.
    > #
    > # Where should you do additional test configuration?
    > # Learn more about the roles of various files in:
    > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
    > # * https://testthat.r-lib.org/articles/special-files.html
    > 
    > library(testthat)
    > library(inshiny)
    > 
    > test_check("inshiny")
    Saving _problems/test-action-4.R
    Saving _problems/test-action-10.R
    [ FAIL 2 | WARN 0 | SKIP 9 | PASS 24 ]
    
    ══ Skipped tests (9) ═══════════════════════════════════════════════════════════
    • On CRAN (9): 'test-check.R:1:1', 'test-date.R:1:1', 'test-inline.R:1:1',
      'test-number.R:1:1', 'test-select-multi.R:1:1', 'test-select.R:1:1',
      'test-slider.R:1:1', 'test-text.R:1:1', 'test-update.R:1:1'
    
    ══ Failed tests ════════════════════════════════════════════════════════════════
    ── Error ('test-action.R:2:5'): link is stable ─────────────────────────────────
    Error in `check_tags(widget, shiny::a(), "shiny::actionLink()")`: Unexpected tag structure from shiny::actionLink(). Please contact the package maintainer.
    Backtrace:
        ▆
     1. ├─inshiny:::cc(...)
     2. │ └─base::cat(as.character(x)) at ./helper.R:2:5
     3. └─inshiny::inline_link(...)
     4.   └─inshiny:::check_tags(widget, shiny::a(), "shiny::actionLink()")
    ── Error ('test-action.R:8:5'): button is stable ───────────────────────────────
    Error in `check_tags(widget, shiny::tags$button(), "shiny::actionButton()")`: Unexpected tag structure from shiny::actionButton(). Please contact the package maintainer.
    Backtrace:
        ▆
     1. ├─inshiny:::cc(...)
     2. │ └─base::cat(as.character(x)) at ./helper.R:2:5
     3. └─inshiny::inline_button(...)
     4.   └─inshiny:::check_tags(widget, shiny::tags$button(), "shiny::actionButton()")
    
    [ FAIL 2 | WARN 0 | SKIP 9 | PASS 24 ]
    Error:
    ! Test failures.
    Execution halted

Package: omicsTools
Check: tests
New result: ERROR
    Running ‘spelling.R’ [0s/0s]
    Running ‘testthat.R’ [4s/4s]
  Running the tests in ‘tests/testthat.R’ failed.
  Complete output:
    > # This file is part of the standard setup for testthat.
    > # It is recommended that you do not modify it.
    > #
    > # Where should you do additional test configuration?
    > # Learn more about the roles of various files in:
    > # * https://r-pkgs.org/tests.html
    > # * https://testthat.r-lib.org/reference/test_package.html#special-files
    > 
    > library(testthat)
    > library(omicsTools)
    
    This is omicsTools version 1.0.5.
    omicsTools is free software and comes with ABSOLUTELY NO WARRANTY.
    Please use at your own risk.
    > 
    > test_check("omicsTools")
    Loading required package: shiny
    Saving _problems/test-golem_utils_ui-99.R
    Saving _problems/test-golem_utils_ui-105.R
    [ FAIL 2 | WARN 0 | SKIP 1 | PASS 94 ]
    
    ══ Skipped tests (1) ═══════════════════════════════════════════════════════════
    • On CRAN (1): 'test-golem-recommended.R:72:5'
    
    ══ Failed tests ════════════════════════════════════════════════════════════════
    ── Failure ('test-golem_utils_ui.R:96:3'): Test undisplay works ────────────────
    Expected `as.character(b)` to equal "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\">go</button>".
    Differences:
    lines(actual) vs lines(expected)
    - "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\">"
    - "  <span class=\"action-label\">go</span>"
    - "</button>"
    + "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\">go</button>"
    
    ── Failure ('test-golem_utils_ui.R:102:3'): Test undisplay works ───────────────
    Expected `as.character(b_undisplay)` to equal "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\" style=\"display: none;\">go</button>".
    Differences:
    lines(actual) vs lines(expected)
    - "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\" style=\"display: none;\">"
    - "  <span class=\"action-label\">go</span>"
    - "</button>"
    + "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\" style=\"display: none;\">go</button>"
    
    
    [ FAIL 2 | WARN 0 | SKIP 1 | PASS 94 ]
    Error:
    ! Test failures.
    Execution halted

Package: processmapR
Check: dependencies in R code
New result: NOTE
  Unexported object imported by a ':::' call: ‘bupaR:::apply_grouped_fun’
    See the note in ?`:::` about the use of this operator.

Package: shinyGovstyle
Check: tests
New result: ERROR
    Running ‘testthat.R’ [3s/3s]
  Running the tests in ‘tests/testthat.R’ failed.
  Complete output:
    > library(testthat)
    > library(shinyGovstyle)
    > 
    > test_check("shinyGovstyle")
    Saving _problems/test-backlink_Input-7.R
    [ FAIL 1 | WARN 0 | SKIP 0 | PASS 125 ]
    
    ══ Failed tests ════════════════════════════════════════════════════════════════
    ── Failure ('test-backlink_Input.R:4:3'): backlink works ───────────────────────
    Expected `backlink_check$children[[1]][[2]]` to be identical to "Back".
    Differences:
    target is NULL, current is character
    
    [ FAIL 1 | WARN 0 | SKIP 0 | PASS 125 ]
    Error:
    ! Test failures.
    Execution halted

Package: ShinyLink
Check: tests
New result: ERROR
    Running ‘spelling.R’ [0s/0s]
    Running ‘testthat.R’ [8s/8s]
  Running the tests in ‘tests/testthat.R’ failed.
  Complete output:
    > # This file is part of the standard setup for testthat.
    > # It is recommended that you do not modify it.
    > #
    > # Where should you do additional test configuration?
    > # Learn more about the roles of various files in:
    > # * https://r-pkgs.org/tests.html
    > # * https://testthat.r-lib.org/reference/test_package.html#special-files
    > 
    > library(testthat)
    > library(ShinyLink)
    > 
    > test_check("ShinyLink")
    Loading required package: shiny
    Saving _problems/test-golem_utils_ui-99.R
    Saving _problems/test-golem_utils_ui-105.R
    [ FAIL 2 | WARN 0 | SKIP 1 | PASS 145 ]
    
    ══ Skipped tests (1) ═══════════════════════════════════════════════════════════
    • On CRAN (1): 'test-golem-recommended.R:72:5'
    
    ══ Failed tests ════════════════════════════════════════════════════════════════
    ── Failure ('test-golem_utils_ui.R:96:3'): Test undisplay works ────────────────
    Expected `as.character(b)` to equal "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\">go</button>".
    Differences:
    lines(actual) vs lines(expected)
    - "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\">"
    - "  <span class=\"action-label\">go</span>"
    - "</button>"
    + "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\">go</button>"
    
    ── Failure ('test-golem_utils_ui.R:102:3'): Test undisplay works ───────────────
    Expected `as.character(b_undisplay)` to equal "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\" style=\"display: none;\">go</button>".
    Differences:
    lines(actual) vs lines(expected)
    - "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\" style=\"display: none;\">"
    - "  <span class=\"action-label\">go</span>"
    - "</button>"
    + "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\" style=\"display: none;\">go</button>"
    
    
    [ FAIL 2 | WARN 0 | SKIP 1 | PASS 145 ]
    Error:
    ! Test failures.
    Execution halted

Package: shinySbm
Check: tests
New result: ERROR
    Running ‘spelling.R’ [0s/0s]
    Running ‘testthat.R’ [8s/8s]
  Running the tests in ‘tests/testthat.R’ failed.
  Complete output:
    > # This file is part of the standard setup for testthat.
    > # It is recommended that you do not modify it.
    > #
    > # Where should you do additional test configuration?
    > # Learn more about the roles of various files in:
    > # * https://r-pkgs.org/tests.html
    > # * https://testthat.r-lib.org/reference/test_package.html#special-files
    > 
    > library(testthat)
    > library(shinySbm)
    Loading required package: sbm
    > 
    > test_check("shinySbm")
    Loading required package: shiny
    Saving _problems/test-golem_utils_ui-99.R
    Saving _problems/test-golem_utils_ui-105.R
    [ FAIL 2 | WARN 0 | SKIP 1 | PASS 141 ]
    
    ══ Skipped tests (1) ═══════════════════════════════════════════════════════════
    • On CRAN (1): 'test-golem-recommended.R:72:5'
    
    ══ Failed tests ════════════════════════════════════════════════════════════════
    ── Failure ('test-golem_utils_ui.R:96:3'): Test undisplay works ────────────────
    Expected `as.character(b)` to equal "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\">go</button>".
    Differences:
    lines(actual) vs lines(expected)
    - "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\">"
    - "  <span class=\"action-label\">go</span>"
    - "</button>"
    + "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\">go</button>"
    
    ── Failure ('test-golem_utils_ui.R:102:3'): Test undisplay works ───────────────
    Expected `as.character(b_undisplay)` to equal "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\" style=\"display: none;\">go</button>".
    Differences:
    lines(actual) vs lines(expected)
    - "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\" style=\"display: none;\">"
    - "  <span class=\"action-label\">go</span>"
    - "</button>"
    + "<button id=\"go_filter\" type=\"button\" class=\"btn btn-default action-button\" style=\"display: none;\">go</button>"
    
    
    [ FAIL 2 | WARN 0 | SKIP 1 | PASS 141 ]
    Error:
    ! Test failures.
    Execution halted