* using log directory ‘/srv/hornik/tmp/CRAN_pretest/sft.Rcheck’ * using R Under development (unstable) (2025-04-17 r88154) * using platform: x86_64-pc-linux-gnu * R was compiled by Debian clang version 19.1.7 (1+b1) Debian flang-new version 19.1.7 (1+b1) * running under: Debian GNU/Linux trixie/sid * using session charset: UTF-8 * checking for file ‘sft/DESCRIPTION’ ... OK * this is package ‘sft’ version ‘2.4’ * checking CRAN incoming feasibility ... [4s/4s] NOTE Maintainer: ‘Joe Houpt ’ New maintainer: Joe Houpt Old maintainer(s): Joe Houpt No Authors@R field in DESCRIPTION. Please add one, modifying Authors@R: c(person(given = "Joe", family = "Houpt", role = c("aut", "cre"), email = "joseph.houpt@utsa.edu"), person(given = "Leslie", family = "Blaha", role = "aut", email = "Leslie.Blaha@wpafb.af.mil")) as necessary. Package CITATION file contains call(s) to old-style citEntry(). Please use bibentry() instead. * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘sft’ can be installed ... [6s/6s] OK * checking package directory ... OK * checking for future file timestamps ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... NOTE Non-standard file/directory found at top level: ‘Rplots.pdf’ * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [1s/1s] OK * checking whether the package can be loaded with stated dependencies ... [1s/1s] OK * checking whether the package can be unloaded cleanly ... [1s/1s] OK * checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK * checking whether the namespace can be unloaded cleanly ... [1s/1s] OK * checking loading without being on the library search path ... [1s/1s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [10s/10s] OK * checking Rd files ... [0s/0s] OK * checking Rd metadata ... OK * checking Rd line widths ... NOTE Rd file 'capacity.id.Rd': \usage lines wider than 90 characters: capacity.id(dual.target.rt, no.target.rt, single.target.rts, dual.target.cr, no.target.cr, single.target.crs, ratio=TRUE) Rd file 'ucip_id_test.Rd': \usage lines wider than 90 characters: ucip.id.test(dual.target.rt, no.target.rt, single.target.rts, dual.target.cr=NULL, no.target.cr=NULL, single.target.crs=NULL) \examples lines wider than 100 characters: z.limited <- ucip.id.test(dual.target.rt=RT.pp.limited, no.target.rt=RT.nt, single.target.rts=list(RT.pa, RT.ap)) z.unlimited <- ucip.id.test(dual.target.rt=RT.pp.unlimited, no.target.rt=RT.nt, single.target.rts=list(RT.pa, RT.ap)) z.super <- ucip.id.test(dual.target.rt=RT.pp.super, no.target.rt=RT.nt, single.target.rts=list(RT.pa, RT.ap)) These lines will be truncated in the PDF manual. * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... [0s/0s] OK * checking data for ASCII and uncompressed saves ... OK * checking examples ... [5s/5s] OK * checking PDF version of manual ... [3s/3s] OK * checking HTML version of manual ... [1s/1s] OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 3 NOTEs