* using log directory ‘/srv/hornik/tmp/CRAN/sevenbridges2.Rcheck’ * using R Under development (unstable) (2023-12-18 r85702) * using platform: x86_64-pc-linux-gnu * R was compiled by Debian clang version 17.0.6 (2) Debian flang-new version 17.0.6 (2) * running under: Debian GNU/Linux trixie/sid * using session charset: UTF-8 * checking for file ‘sevenbridges2/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘sevenbridges2’ version ‘0.1.0’ * package encoding: UTF-8 * checking CRAN incoming feasibility ... [5s/12s] NOTE Maintainer: ‘Marija Jovanovic ’ New submission Unknown, possibly misspelled, fields in DESCRIPTION: ‘Remotes’ Found the following (possibly) invalid URLs: URL: %22http://adv-r.had.co.nz/R5.html%22 From: inst/doc/quickstart.html Message: Invalid URI scheme URL: %22https://adv-r.hadley.nz/r6.html From: inst/doc/quickstart.html Message: Invalid URI scheme URL: http://docs.cancergenomicscloud.org/docs/connect-cloud-storage-overview (moved to https://docs.cancergenomicscloud.org/docs/connect-cloud-storage-overview) From: inst/doc/Files_upload_and_Volumes.html Status: 301 Message: Moved Permanently URL: http://docs.cancergenomicscloud.org/docs/new-1 (moved to https://docs.cancergenomicscloud.org/docs/new-1) From: inst/doc/quickstart.html Status: 301 Message: Moved Permanently URL: http://docs.cancergenomicscloud.org/v1.0/docs/get-your-authentication-token (moved to https://docs.cancergenomicscloud.org/v1.0/docs/get-your-authentication-token) From: inst/doc/Authentication_and_Billing.html Status: 301 Message: Moved Permanently URL: http://docs.cancergenomicscloud.org/v1.0/page/the-cgc-api (moved to https://docs.cancergenomicscloud.org/v1.0/page/the-cgc-api) From: inst/doc/quickstart.html Status: 301 Message: Moved Permanently URL: http://www.cavatica.org/ (moved to https://www.cavatica.org/) From: README.md Status: 301 Message: Moved Permanently URL: https://cancergenome.nih.gov (moved to https://www.cancer.gov/ccg/research/genome-sequencing/tcga) From: README.md Status: 301 Message: Moved Permanently URL: https://github.com/sbg/sevenbridges/issues From: README.md Status: 404 Message: Not Found URL: https://r-stack.pages.sbgenomics.com/sevenbridges2/ From: README.md Status: Error Message: Could not resolve host: r-stack.pages.sbgenomics.com For content that is 'Moved Permanently', please change http to https, add trailing slashes, or replace the old by the new URL. Size of tarball: 6558622 bytes * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... NOTE Found the following hidden files and directories: .gitlab-ci.yml .lintr These were most likely included in error. See section ‘Package structure’ in the ‘Writing R Extensions’ manual. CRAN-pack does not know about .gitlab-ci.yml .lintr * checking for portable file names ... NOTE Found the following non-portable file paths: sevenbridges2/public/deps/bootstrap-5.3.1/fonts/HI_jiYsKILxRpg3hIP6sJ7fM7PqlOPHYvDP_W9O7GQTTbI1rSg.woff sevenbridges2/public/deps/bootstrap-5.3.1/fonts/HI_jiYsKILxRpg3hIP6sJ7fM7PqlOPHYvDP_W9O7GQTTsoprSg.woff sevenbridges2/public/deps/bootstrap-5.3.1/fonts/UcCO3FwrK3iLTeHuS_fvQtMwCp50KnMw2boKoduKmMEVuFuYMZs.woff sevenbridges2/public/deps/bootstrap-5.3.1/fonts/UcCO3FwrK3iLTeHuS_fvQtMwCp50KnMw2boKoduKmMEVuI6fMZs.woff sevenbridges2/public/deps/bootstrap-5.3.1/fonts/UcCO3FwrK3iLTeHuS_fvQtMwCp50KnMw2boKoduKmMEVuLyfMZs.woff sevenbridges2/public/deps/bootstrap-5.3.1/fonts/memQYaGs126MiZpBA-UFUIcVXSCEkx2cmqvXlWq8tWZ0Pw86hd0Rk0ZjaVQ.woff sevenbridges2/public/deps/bootstrap-5.3.1/fonts/memQYaGs126MiZpBA-UFUIcVXSCEkx2cmqvXlWq8tWZ0Pw86hd0Rk5hkWVAexg.woff sevenbridges2/public/deps/bootstrap-5.3.1/fonts/memQYaGs126MiZpBA-UFUIcVXSCEkx2cmqvXlWq8tWZ0Pw86hd0Rk5hkaVQ.woff sevenbridges2/public/deps/bootstrap-5.3.1/fonts/memQYaGs126MiZpBA-UFUIcVXSCEkx2cmqvXlWq8tWZ0Pw86hd0Rk8ZkWVAexg.woff sevenbridges2/public/deps/bootstrap-5.3.1/fonts/memQYaGs126MiZpBA-UFUIcVXSCEkx2cmqvXlWq8tWZ0Pw86hd0Rk8ZkaVQ.woff sevenbridges2/public/deps/bootstrap-5.3.1/fonts/memQYaGs126MiZpBA-UFUIcVXSCEkx2cmqvXlWq8tWZ0Pw86hd0Rk_RkaVQ.woff sevenbridges2/public/deps/bootstrap-5.3.1/fonts/memQYaGs126MiZpBA-UFUIcVXSCEkx2cmqvXlWq8tWZ0Pw86hd0RkxhjaVQ.woff sevenbridges2/public/deps/bootstrap-5.3.1/fonts/memQYaGs126MiZpBA-UFUIcVXSCEkx2cmqvXlWq8tWZ0Pw86hd0RkyFjWVAexg.woff sevenbridges2/public/deps/bootstrap-5.3.1/fonts/memQYaGs126MiZpBA-UFUIcVXSCEkx2cmqvXlWq8tWZ0Pw86hd0RkyFjaVQ.woff sevenbridges2/public/deps/bootstrap-5.3.1/fonts/memSYaGs126MiZpBA-UvWbX2vVnXBbObj2OVZyOOSr4dVJWUgsg-1x4gaVQ.woff sevenbridges2/public/deps/bootstrap-5.3.1/fonts/memSYaGs126MiZpBA-UvWbX2vVnXBbObj2OVZyOOSr4dVJWUgsg-1y4k.woff sevenbridges2/public/deps/bootstrap-5.3.1/fonts/memSYaGs126MiZpBA-UvWbX2vVnXBbObj2OVZyOOSr4dVJWUgsgH1y4k.woff sevenbridges2/public/deps/bootstrap-5.3.1/fonts/memSYaGs126MiZpBA-UvWbX2vVnXBbObj2OVZyOOSr4dVJWUgshZ1y4k.woff sevenbridges2/public/deps/bootstrap-5.3.1/fonts/memSYaGs126MiZpBA-UvWbX2vVnXBbObj2OVZyOOSr4dVJWUgsiH0B4gaVQ.woff sevenbridges2/public/deps/bootstrap-5.3.1/fonts/memSYaGs126MiZpBA-UvWbX2vVnXBbObj2OVZyOOSr4dVJWUgsiH0C4k.woff sevenbridges2/public/deps/bootstrap-5.3.1/fonts/memSYaGs126MiZpBA-UvWbX2vVnXBbObj2OVZyOOSr4dVJWUgsjZ0B4gaVQ.woff sevenbridges2/public/deps/bootstrap-5.3.1/fonts/memSYaGs126MiZpBA-UvWbX2vVnXBbObj2OVZyOOSr4dVJWUgsjZ0C4k.woff sevenbridges2/public/deps/bootstrap-5.3.1/fonts/memSYaGs126MiZpBA-UvWbX2vVnXBbObj2OVZyOOSr4dVJWUgsjr0C4k.woff Tarballs are only required to store paths of up to 100 bytes and cannot store those of more than 256 bytes, with restrictions including to 100 bytes for the final component. See section ‘Package structure’ in the ‘Writing R Extensions’ manual. * checking for sufficient/correct file permissions ... OK * checking whether package ‘sevenbridges2’ can be installed ... [14s/14s] OK * checking package directory ... OK * checking for future file timestamps ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... NOTE Maintainer field differs from that derived from Authors@R Maintainer: ‘Marija Jovanovic ’ Authors@R: ‘Vladimir Obucina ’ * checking top-level files ... NOTE Non-standard files/directories found at top level: ‘Reflections_demo.R’ ‘Sprint_Review_Tasks.R’ ‘Sprint_review_Import_Export.R’ ‘Untitled.R’ ‘Untitled2.R’ ‘ali_cred.json’ ‘app_json.cwl’ ‘app_yaml.cwl’ ‘azure_cred.json’ ‘bad_request.rds’ ‘cloud_creds’ ‘config.yml’ ‘covr_sonarqube.xml’ ‘public’ ‘request_object.rds’ ‘resolution_summary_delete.R’ ‘resolution_summary_delete_volume.R’ ‘run_cov.R’ ‘sonar-project.properties’ ‘tasks_testing.R’ ‘test_app.json’ ‘testing_apps.R’ ‘testing_volumes.R’ ‘tracks’ * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [1s/1s] OK * checking whether the package can be loaded with stated dependencies ... [1s/1s] OK * checking whether the package can be unloaded cleanly ... [1s/1s] OK * checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK * checking whether the namespace can be unloaded cleanly ... [1s/1s] OK * checking loading without being on the library search path ... [1s/1s] OK * checking whether startup messages can be suppressed ... [1s/1s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [8s/8s] OK * checking Rd files ... [1s/1s] NOTE checkRd: (-1) Apps.Rd:138: Lost braces; missing escapes or markup? 138 | {project_owner}/{project_short_name} or | ^ checkRd: (-1) Apps.Rd:138: Lost braces; missing escapes or markup? 138 | {project_owner}/{project_short_name} or | ^ checkRd: (-1) Apps.Rd:139: Lost braces; missing escapes or markup? 139 | {division_name}/{project_short_name} or Project object, to restrict | ^ checkRd: (-1) Apps.Rd:139: Lost braces; missing escapes or markup? 139 | {division_name}/{project_short_name} or Project object, to restrict | ^ checkRd: (-1) Apps.Rd:208: Lost braces; missing escapes or markup? 208 | \item{\code{id}}{The full {project_id}/{app_short_name} | ^ checkRd: (-1) Apps.Rd:208: Lost braces; missing escapes or markup? 208 | \item{\code{id}}{The full {project_id}/{app_short_name} | ^ * checking Rd metadata ... OK * checking Rd line widths ... NOTE Rd file 'Volumes.Rd': \examples lines wider than 100 characters: service_account_impersonation_url = "", regional_cred_verification_url = "" These lines will be truncated in the PDF manual. * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... [4s/4s] OK * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... [19s/11s] ERROR Running ‘testthat.R’ [18s/11s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/tests.html > # * https://testthat.r-lib.org/reference/test_package.html#special-files > > library(testthat) > library(sevenbridges2) > library(httr) > library(checkmate) > > test_check("sevenbridges2") Starting 2 test processes [ FAIL 3 | WARN 0 | SKIP 18 | PASS 739 ] ══ Skipped tests (18) ══════════════════════════════════════════════════════════ • On CRAN (18): 'test-class-app.R:18:3', 'test-class-billing.R:28:3', 'test-class-collection.R:69:3', 'test-class-export.R:30:3', 'test-class-file.R:22:3', 'test-class-file.R:28:3', 'test-class-import.R:31:3', 'test-class-invoice.R:18:3', 'test-class-member.R:28:3', 'test-class-ratelimit.R:17:3', 'test-class-project.R:23:3', 'test-class-project.R:28:3', 'test-class-task.R:23:3', 'test-class-user.R:19:3', 'test-class-volcontent-collection.R:65:3', 'test-class-volume.R:21:3', 'test-class-volumefile.R:18:3', 'test-class-volumeprefix.R:35:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-api-utils.R:11:3'): Utility function parse_time works ──────── Epoch conversion to human-readable date went wrong. (`actual`) not equal to "2017-03-16 21:34:53 " (`expected`). `actual`: "2017-03-16 21:34:53 GMT" `expected`: "2017-03-16 21:34:53 " ── Failure ('test-api-utils.R:23:3'): Utility function parse_time works ──────── Epoch conversion to human-readable date went wrong. (`actual`) not equal to "2050-12-30 " (`expected`). `actual`: "2050-12-30 GMT" `expected`: "2050-12-30 " ── Error ('test-class-auth.R:222:3'): Calling the api method with no arguments returns a list of all API paths ── Error in `mtfrm.default(structure(list(url = "https://api.sbgenomics.com/v2/?limit=50&offset=0", status_code = 200L, headers = structure(list(server = "nginx", date = "Tue, 19 Dec 2023 15:00:16 GMT", `content-type` = "application/json", accept = "application/json", `content-encoding` = "gzip", `x-frame-options` = "DENY", `x-xss-protection` = "1; mode=block", `x-content-type-options` = "nosniff", `x-download-options` = "noopen", `content-security-policy` = "frame-ancestors 'none'; report-uri https://sbgenomics.report-uri.com/r/d/csp/enforce", `strict-transport-security` = "max-age=63072000"), class = c("insensitive", "list")), all_headers = list(list(status = 200L, version = "HTTP/2", headers = structure(list(server = "nginx", date = "Tue, 19 Dec 2023 15:00:16 GMT", `content-type` = "application/json", accept = "application/json", `content-encoding` = "gzip", `x-frame-options` = "DENY", `x-xss-protection` = "1; mode=block", `x-content-type-options` = "nosniff", `x-download-options` = "noopen", `content-security-policy` = "frame-ancestors 'none'; report-uri https://sbgenomics.report-uri.com/r/d/csp/enforce", `strict-transport-security` = "max-age=63072000"), class = c("insensitive", "list")))), cookies = structure(list(domain = logical(0), flag = logical(0), path = logical(0), secure = logical(0), expiration = structure(numeric(0), class = c("POSIXct", "POSIXt")), name = logical(0), value = logical(0)), row.names = integer(0), class = "data.frame"), content = as.raw(c(0x7b, 0x22, 0x72, 0x61, 0x74, 0x65, 0x5f, 0x6c, 0x69, 0x6d, 0x69, 0x74, 0x5f, 0x75, 0x72, 0x6c, 0x22, 0x3a, 0x22, 0x68, 0x74, 0x74, 0x70, 0x73, 0x3a, 0x2f, 0x2f, 0x61, 0x70, 0x69, 0x2e, 0x73, 0x62, 0x67, 0x65, 0x6e, 0x6f, 0x6d, 0x69, 0x63, 0x73, 0x2e, 0x63, 0x6f, 0x6d, 0x2f, 0x76, 0x32, 0x2f, 0x72, 0x61, 0x74, 0x65, 0x5f, 0x6c, 0x69, 0x6d, 0x69, 0x74, 0x22, 0x2c, 0x22, 0x75, 0x73, 0x65, 0x72, 0x5f, 0x75, 0x72, 0x6c, 0x22, 0x3a, 0x22, 0x68, 0x74, 0x74, 0x70, 0x73, 0x3a, 0x2f, 0x2f, 0x61, 0x70, 0x69, 0x2e, 0x73, 0x62, 0x67, 0x65, 0x6e, 0x6f, 0x6d, 0x69, 0x63, 0x73, 0x2e, 0x63, 0x6f, 0x6d, 0x2f, 0x76, 0x32, 0x2f, 0x75, 0x73, 0x65, 0x72, 0x22, 0x2c, 0x22, 0x75, 0x73, 0x65, 0x72, 0x73, 0x5f, 0x75, 0x72, 0x6c, 0x22, 0x3a, 0x22, 0x68, 0x74, 0x74, 0x70, 0x73, 0x3a, 0x2f, 0x2f, 0x61, 0x70, 0x69, 0x2e, 0x73, 0x62, 0x67, 0x65, 0x6e, 0x6f, 0x6d, 0x69, 0x63, 0x73, 0x2e, 0x63, 0x6f, 0x6d, 0x2f, 0x76, 0x32, 0x2f, 0x75, 0x73, 0x65, 0x72, 0x73, 0x22, 0x2c, 0x22, 0x62, 0x69, 0x6c, 0x6c, 0x69, 0x6e, 0x67, 0x5f, 0x75, 0x72, 0x6c, 0x22, 0x3a, 0x22, 0x68, 0x74, 0x74, 0x70, 0x73, 0x3a, 0x2f, 0x2f, 0x61, 0x70, 0x69, 0x2e, 0x73, 0x62, 0x67, 0x65, 0x6e, 0x6f, 0x6d, 0x69, 0x63, 0x73, 0x2e, 0x63, 0x6f, 0x6d, 0x2f, 0x76, 0x32, 0x2f, 0x62, 0x69, 0x6c, 0x6c, 0x69, 0x6e, 0x67, 0x22, 0x2c, 0x22, 0x70, 0x72, 0x6f, 0x6a, 0x65, 0x63, 0x74, 0x73, 0x5f, 0x75, 0x72, 0x6c, 0x22, 0x3a, 0x22, 0x68, 0x74, 0x74, 0x70, 0x73, 0x3a, 0x2f, 0x2f, 0x61, 0x70, 0x69, 0x2e, 0x73, 0x62, 0x67, 0x65, 0x6e, 0x6f, 0x6d, 0x69, 0x63, 0x73, 0x2e, 0x63, 0x6f, 0x6d, 0x2f, 0x76, 0x32, 0x2f, 0x70, 0x72, 0x6f, 0x6a, 0x65, 0x63, 0x74, 0x73, 0x22, 0x2c, 0x22, 0x66, 0x69, 0x6c, 0x65, 0x73, 0x5f, 0x75, 0x72, 0x6c, 0x22, 0x3a, 0x22, 0x68, 0x74, 0x74, 0x70, 0x73, 0x3a, 0x2f, 0x2f, 0x61, 0x70, 0x69, 0x2e, 0x73, 0x62, 0x67, 0x65, 0x6e, 0x6f, 0x6d, 0x69, 0x63, 0x73, 0x2e, 0x63, 0x6f, 0x6d, 0x2f, 0x76, 0x32, 0x2f, 0x66, 0x69, 0x6c, 0x65, 0x73, 0x22, 0x2c, 0x22, 0x74, 0x61, 0x73, 0x6b, 0x73, 0x5f, 0x75, 0x72, 0x6c, 0x22, 0x3a, 0x22, 0x68, 0x74, 0x74, 0x70, 0x73, 0x3a, 0x2f, 0x2f, 0x61, 0x70, 0x69, 0x2e, 0x73, 0x62, 0x67, 0x65, 0x6e, 0x6f, 0x6d, 0x69, 0x63, 0x73, 0x2e, 0x63, 0x6f, 0x6d, 0x2f, 0x76, 0x32, 0x2f, 0x74, 0x61, 0x73, 0x6b, 0x73, 0x22, 0x2c, 0x22, 0x61, 0x70, 0x70, 0x73, 0x5f, 0x75, 0x72, 0x6c, 0x22, 0x3a, 0x22, 0x68, 0x74, 0x74, 0x70, 0x73, 0x3a, 0x2f, 0x2f, 0x61, 0x70, 0x69, 0x2e, 0x73, 0x62, 0x67, 0x65, 0x6e, 0x6f, 0x6d, 0x69, 0x63, 0x73, 0x2e, 0x63, 0x6f, 0x6d, 0x2f, 0x76, 0x32, 0x2f, 0x61, 0x70, 0x70, 0x73, 0x22, 0x2c, 0x22, 0x61, 0x63, 0x74, 0x69, 0x6f, 0x6e, 0x5f, 0x75, 0x72, 0x6c, 0x22, 0x3a, 0x22, 0x68, 0x74, 0x74, 0x70, 0x73, 0x3a, 0x2f, 0x2f, 0x61, 0x70, 0x69, 0x2e, 0x73, 0x62, 0x67, 0x65, 0x6e, 0x6f, 0x6d, 0x69, 0x63, 0x73, 0x2e, 0x63, 0x6f, 0x6d, 0x2f, 0x76, 0x32, 0x2f, 0x61, 0x63, 0x74, 0x69, 0x6f, 0x6e, 0x22, 0x2c, 0x22, 0x75, 0x70, 0x6c, 0x6f, 0x61, 0x64, 0x5f, 0x75, 0x72, 0x6c, 0x22, 0x3a, 0x22, 0x68, 0x74, 0x74, 0x70, 0x73, 0x3a, 0x2f, 0x2f, 0x61, 0x70, 0x69, 0x2e, 0x73, 0x62, 0x67, 0x65, 0x6e, 0x6f, 0x6d, 0x69, 0x63, 0x73, 0x2e, 0x63, 0x6f, 0x6d, 0x2f, 0x76, 0x32, 0x2f, 0x75, 0x70, 0x6c, 0x6f, 0x61, 0x64, 0x22, 0x2c, 0x22, 0x73, 0x74, 0x6f, 0x72, 0x61, 0x67, 0x65, 0x5f, 0x75, 0x72, 0x6c, 0x22, 0x3a, 0x22, 0x68, 0x74, 0x74, 0x70, 0x73, 0x3a, 0x2f, 0x2f, 0x61, 0x70, 0x69, 0x2e, 0x73, 0x62, 0x67, 0x65, 0x6e, 0x6f, 0x6d, 0x69, 0x63, 0x73, 0x2e, 0x63, 0x6f, 0x6d, 0x2f, 0x76, 0x32, 0x2f, 0x73, 0x74, 0x6f, 0x72, 0x61, 0x67, 0x65, 0x22, 0x2c, 0x22, 0x6d, 0x61, 0x72, 0x6b, 0x65, 0x72, 0x73, 0x5f, 0x75, 0x72, 0x6c, 0x22, 0x3a, 0x22, 0x68, 0x74, 0x74, 0x70, 0x73, 0x3a, 0x2f, 0x2f, 0x61, 0x70, 0x69, 0x2e, 0x73, 0x62, 0x67, 0x65, 0x6e, 0x6f, 0x6d, 0x69, 0x63, 0x73, 0x2e, 0x63, 0x6f, 0x6d, 0x2f, 0x76, 0x32, 0x2f, 0x67, 0x65, 0x6e, 0x6f, 0x6d, 0x65, 0x2f, 0x6d, 0x61, 0x72, 0x6b, 0x65, 0x72, 0x73, 0x22, 0x7d)), date = structure(1702998016, class = c("POSIXct", "POSIXt"), tzone = "GMT"), times = c(redirect = 0, namelookup = 0.00157, connect = 0.105983, pretransfer = 0.357928, starttransfer = 0.463463, total = 0.463568), request = structure(list(method = "GET", url = "https://api.sbgenomics.com/v2/?limit=50&offset=0", headers = c(`X-SBG-Auth-Token` = "b1rsm365mpwru9m403mabrplcdfus3ls", Accept = "application/json", `Content-Type` = "application/json", `User-Agent` = "sevenbridges2/0.1.0 (Debian GNU/Linux trixie/sid; x86_64-pc-linux-gnu; R Under development (unstable) (2023-12-18 r85702))" ), fields = NULL, options = list(useragent = "libcurl/8.4.0 r-curl/5.2.0 httr/1.4.7", httpget = TRUE), auth_token = NULL, output = structure(list(), class = c("write_memory", "write_function"))), class = "request"), handle = ), class = "response"))`: cannot mtfrm Backtrace: ▆ 1. └─setup_auth_object$api() at test-class-auth.R:222:3 2. └─sevenbridges2::api(...) 3. └─base::setequal(req, handled_response) 4. ├─base::mtfrm(``) 5. └─base::mtfrm.default(``) [ FAIL 3 | WARN 0 | SKIP 18 | PASS 739 ] Error: Test failures Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes in ‘inst/doc’ ... OK * checking re-building of vignette outputs ... [4s/4s] OK * checking PDF version of manual ... [7s/7s] WARNING LaTeX errors when creating PDF version. This typically indicates Rd problems. LaTeX errors found: ! LaTeX Error: Unicode character ⁨ (U+2068) not set up for use with LaTeX. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ! LaTeX Error: Unicode character ⁩ (U+2069) not set up for use with LaTeX. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ! LaTeX Error: Unicode character ⁨ (U+2068) not set up for use with LaTeX. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ! LaTeX Error: Unicode character ⁩ (U+2069) not set up for use with LaTeX. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. * checking PDF version of manual without index ... ERROR * checking HTML version of manual ... [3s/3s] NOTE Found the following HTML validation problems: App.html:747:1 (App.Rd:638): Error: is not recognized! Did you mean to enable the custom-tags option? App.html:747:1 (App.Rd:638): Warning: discarding unexpected App.html:748:37 (App.Rd:639): Error: is not recognized! Did you mean to enable the custom-tags option? App.html:748:37 (App.Rd:639): Warning: discarding unexpected App.html:749:43 (App.Rd:640): Error: is not recognized! Did you mean to enable the custom-tags option? App.html:749:43 (App.Rd:640): Warning: discarding unexpected Project.html:1551:1 (Project.Rd:1494): Error: is not recognized! Did you mean to enable the custom-tags option? Project.html:1551:1 (Project.Rd:1494): Warning: discarding unexpected Project.html:1552:37 (Project.Rd:1495): Error: is not recognized! Did you mean to enable the custom-tags option? Project.html:1552:37 (Project.Rd:1495): Warning: discarding unexpected Project.html:1553:43 (Project.Rd:1496): Error: is not recognized! Did you mean to enable the custom-tags option? Project.html:1553:43 (Project.Rd:1496): Warning: discarding unexpected Task.html:1001:1 (Task.Rd:909): Error: is not recognized! Did you mean to enable the custom-tags option? Task.html:1001:1 (Task.Rd:909): Warning: discarding unexpected Task.html:1002:37 (Task.Rd:910): Error: is not recognized! Did you mean to enable the custom-tags option? Task.html:1002:37 (Task.Rd:910): Warning: discarding unexpected Task.html:1003:43 (Task.Rd:911): Error: is not recognized! Did you mean to enable the custom-tags option? Task.html:1003:43 (Task.Rd:911): Warning: discarding unexpected Tasks.html:444:1 (Tasks.Rd:320): Error: is not recognized! Did you mean to enable the custom-tags option? Tasks.html:444:1 (Tasks.Rd:320): Warning: discarding unexpected Tasks.html:445:37 (Tasks.Rd:321): Error: is not recognized! Did you mean to enable the custom-tags option? Tasks.html:445:37 (Tasks.Rd:321): Warning: discarding unexpected Tasks.html:446:43 (Tasks.Rd:322): Error: is not recognized! Did you mean to enable the custom-tags option? Tasks.html:446:43 (Tasks.Rd:322): Warning: discarding unexpected * checking for non-standard things in the check directory ... NOTE Found the following files/directories: ‘sevenbridges2-manual.tex’ * checking for detritus in the temp directory ... OK * DONE Status: 2 ERRORs, 1 WARNING, 9 NOTEs