R Under development (unstable) (2024-09-30 r87204 ucrt) -- "Unsuffered Consequences" Copyright (C) 2024 The R Foundation for Statistical Computing Platform: x86_64-w64-mingw32/x64 R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/tests.html > # * https://testthat.r-lib.org/reference/test_package.html#special-files > > library(testthat) > library(serosv) > > test_check("serosv") SAMPLING FOR MODEL 'fra_2' NOW (CHAIN 1). Chain 1: Chain 1: Gradient evaluation took 0.000128 seconds Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 1.28 seconds. Chain 1: Adjust your expectations accordingly! Chain 1: Chain 1: Chain 1: Iteration: 1 / 5000 [ 0%] (Warmup) Chain 1: Iteration: 500 / 5000 [ 10%] (Warmup) Chain 1: Iteration: 1000 / 5000 [ 20%] (Warmup) Chain 1: Iteration: 1500 / 5000 [ 30%] (Warmup) Chain 1: Iteration: 1501 / 5000 [ 30%] (Sampling) Chain 1: Iteration: 2000 / 5000 [ 40%] (Sampling) Chain 1: Iteration: 2500 / 5000 [ 50%] (Sampling) Chain 1: Iteration: 3000 / 5000 [ 60%] (Sampling) Chain 1: Iteration: 3500 / 5000 [ 70%] (Sampling) Chain 1: Iteration: 4000 / 5000 [ 80%] (Sampling) Chain 1: Iteration: 4500 / 5000 [ 90%] (Sampling) Chain 1: Iteration: 5000 / 5000 [100%] (Sampling) Chain 1: Chain 1: Elapsed Time: 6.053 seconds (Warm-up) Chain 1: 6.017 seconds (Sampling) Chain 1: 12.07 seconds (Total) Chain 1: SAMPLING FOR MODEL 'fra_3' NOW (CHAIN 1). Chain 1: Chain 1: Gradient evaluation took 8.8e-05 seconds Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 0.88 seconds. Chain 1: Adjust your expectations accordingly! Chain 1: Chain 1: Chain 1: Iteration: 1 / 5000 [ 0%] (Warmup) Chain 1: Iteration: 500 / 5000 [ 10%] (Warmup) Chain 1: Iteration: 1000 / 5000 [ 20%] (Warmup) Chain 1: Iteration: 1500 / 5000 [ 30%] (Warmup) Chain 1: Iteration: 1501 / 5000 [ 30%] (Sampling) Chain 1: Iteration: 2000 / 5000 [ 40%] (Sampling) Chain 1: Iteration: 2500 / 5000 [ 50%] (Sampling) Chain 1: Iteration: 3000 / 5000 [ 60%] (Sampling) Chain 1: Iteration: 3500 / 5000 [ 70%] (Sampling) Chain 1: Iteration: 4000 / 5000 [ 80%] (Sampling) Chain 1: Iteration: 4500 / 5000 [ 90%] (Sampling) Chain 1: Iteration: 5000 / 5000 [100%] (Sampling) Chain 1: Chain 1: Elapsed Time: 8.153 seconds (Warm-up) Chain 1: 14.268 seconds (Sampling) Chain 1: 22.421 seconds (Total) Chain 1: SAMPLING FOR MODEL 'log_logistic' NOW (CHAIN 1). Chain 1: Chain 1: Gradient evaluation took 8.3e-05 seconds Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 0.83 seconds. Chain 1: Adjust your expectations accordingly! Chain 1: Chain 1: Chain 1: Iteration: 1 / 5000 [ 0%] (Warmup) Chain 1: Iteration: 500 / 5000 [ 10%] (Warmup) Chain 1: Iteration: 1000 / 5000 [ 20%] (Warmup) Chain 1: Iteration: 1500 / 5000 [ 30%] (Warmup) Chain 1: Iteration: 1501 / 5000 [ 30%] (Sampling) Chain 1: Iteration: 2000 / 5000 [ 40%] (Sampling) Chain 1: Iteration: 2500 / 5000 [ 50%] (Sampling) Chain 1: Iteration: 3000 / 5000 [ 60%] (Sampling) Chain 1: Iteration: 3500 / 5000 [ 70%] (Sampling) Chain 1: Iteration: 4000 / 5000 [ 80%] (Sampling) Chain 1: Iteration: 4500 / 5000 [ 90%] (Sampling) Chain 1: Iteration: 5000 / 5000 [100%] (Sampling) Chain 1: Chain 1: Elapsed Time: 1.912 seconds (Warm-up) Chain 1: 1.879 seconds (Sampling) Chain 1: 3.791 seconds (Total) Chain 1: locfit 1.5-9.10 2024-06-24 Maximum number of PQL iterations: 20 iteration 1 iteration 2 iteration 3 iteration 4 [ FAIL 0 | WARN 15 | SKIP 0 | PASS 41 ] [ FAIL 0 | WARN 15 | SKIP 0 | PASS 41 ] > > proc.time() user system elapsed 87.50 7.23 94.81